>GLYN_FLAPR (P49358) Serine hydroxymethyltransferase 2, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 517

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = -3

Query: 287 SNXQXEIAKLRHDVEEYAXQFPTIGFEXXTMKYKN 183
           S  Q EI+KLRHDVEEYA QFPTIGFE  TMKYKN
Sbjct: 483 SAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517

>GLYM_FLAPR (P49357) Serine hydroxymethyltransferase 1, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 517

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = -3

Query: 287 SNXQXEIAKLRHDVEEYAXQFPTIGFEXXTMKYKN 183
           S  Q EI+KLRHDVEEYA QFPTIGFE  TMKYKN
Sbjct: 483 SAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517

>GLYM_SOLTU (P50433) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 518

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = -3

Query: 278 QXEIAKLRHDVEEYAXQFPTIGFEXXTMKYKN 183
           + EIAKLRHDVEEYA QFPTIGFE  TMKYKN
Sbjct: 487 KSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518

>GLYM_ARATH (Q9SZJ5) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 517

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -3

Query: 287 SNXQXEIAKLRHDVEEYAXQFPTIGFEXXTMKYKN 183
           S  Q EIAKLRH+VEE+A QFPTIGFE  TMKYKN
Sbjct: 483 STIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517

>GLYM_PEA (P34899) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 518

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = -3

Query: 287 SNXQXEIAKLRHDVEEYAXQFPTIGFEXXTMKY 189
           S  Q EI+KL+HDVEE+A QFPTIGFE  TMKY
Sbjct: 484 SYVQSEISKLKHDVEEFAKQFPTIGFEKATMKY 516

>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (Fragment)
          Length = 554

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 263 KLRHDVEEYAXQFPTIGFEXXTMKYKN*ALLCFNSKEANRKH 138
           KL+ D  E+    PTIGF   T++YKN   L F   +   KH
Sbjct: 403 KLKQD--EFMQPIPTIGFNVETVEYKN---LKFTIWDVGEKH 439

>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23)
          Length = 574

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 263 KLRHDVEEYAXQFPTIGFEXXTMKYKN*ALLCFNSKEANRKH 138
           KL+ D  E+    PTIGF   T++YKN   L F   +   KH
Sbjct: 423 KLKQD--EFMQPIPTIGFNVETVEYKN---LKFTIWDVGGKH 459

>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (RING finger
           protein 46)
          Length = 574

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 263 KLRHDVEEYAXQFPTIGFEXXTMKYKN*ALLCFNSKEANRKH 138
           KL+ D  E+    PTIGF   T++YKN   L F   +   KH
Sbjct: 423 KLKQD--EFMQPIPTIGFNVETVEYKN---LKFTIWDVGGKH 459


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,155,758
Number of Sequences: 219361
Number of extensions: 540592
Number of successful extensions: 1430
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)