ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7a08 |
|---|---|
| Clone Library Name | barley_pub |
>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 292 Score = 96.3 bits (238), Expect = 7e-20 Identities = 51/167 (30%), Positives = 89/167 (53%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG + A +G L + GDE++++RV PL +++GK+ +G G+G K+ Sbjct: 118 PVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVA 177 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQK 281 + +E LL + K G DP V + + G ++ + + G M+K + F + QK Sbjct: 178 LNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQK 237 Query: 280 DLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 DL LAL A++++ +P A EL+ + G + D SA+++AL+ Sbjct: 238 DLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALE 284
>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 347 Score = 81.3 bits (199), Expect = 2e-15 Identities = 58/171 (33%), Positives = 75/171 (43%), Gaps = 9/171 (5%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG AE G L F+ G E Y P+L MG++ Y G GNG+ K+ Sbjct: 168 PVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMA 227 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVI--------SQGAINAPMFSLKG-PSMVKAAYPT 308 +E L L + +G+ +T+ EV+ S A N +KG PS Y Sbjct: 228 VSMLGTSEALALGQSLGISASTLTEVLNTSSGRCWSSDAYNPVPGVMKGVPS--SRDYNG 285 Query: 307 AFPLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAV 155 F K KDL LA A AE V P + A E+YK G +DFS V Sbjct: 286 GFASKLMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCV 336
>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)| Length = 290 Score = 81.3 bits (199), Expect = 2e-15 Identities = 51/167 (30%), Positives = 80/167 (47%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PV+G A +G L + GD S ++ P+L +G+ + G G+G +KL Sbjct: 124 PVTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCG 183 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQK 281 + AE + LSE++G+ P V++ GA + + P M +A + F +KH K Sbjct: 184 IHAIAAAEAIQLSEQLGIAPELVIDTCGSGAAGSWALTNLAPKMSEADFAPGFMVKHLLK 243 Query: 280 DLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 DLRL AE + P+P A L+ + LG DQ A+I A + Sbjct: 244 DLRLVREAAE--NGPLPGVTLAESLFTSVQLLGGEDQGSQAIIRAYR 288
>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 79.7 bits (195), Expect = 7e-15 Identities = 46/162 (28%), Positives = 77/162 (47%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG + A DG L + GD++++ + L+ M S + G++G G V KL Sbjct: 119 PVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA 178 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQK 281 + +E L L+ K G++P+ V + I G + + K P ++ + F + K Sbjct: 179 LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK 238 Query: 280 DLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAV 155 DL AL + V +P AA E+ + ++ GL D SA+ Sbjct: 239 DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSAL 280
>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 79.7 bits (195), Expect = 7e-15 Identities = 46/162 (28%), Positives = 77/162 (47%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG + A DG L + GD++++ + L+ M S + G++G G V KL Sbjct: 119 PVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA 178 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQK 281 + +E L L+ K G++P+ V + I G + + K P ++ + F + K Sbjct: 179 LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK 238 Query: 280 DLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAV 155 DL AL + V +P AA E+ + ++ GL D SA+ Sbjct: 239 DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSAL 280
>YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)| Length = 288 Score = 76.6 bits (187), Expect = 6e-14 Identities = 42/146 (28%), Positives = 73/146 (50%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG A++G L + G++ ++ P+ +MG++ Y G G+G K+ Sbjct: 121 PVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIA 180 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQK 281 AE + ++K GL+P V++ I+ GA + S P M++ + F +KH K Sbjct: 181 AGMIGVAEAMAYAQKSGLEPENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIK 240 Query: 280 DLRLALALAESVSQPIPTAAAANELY 203 D+ +AL AE + + +P + A LY Sbjct: 241 DMGIALEEAELMGEEMPGLSLAKSLY 266
>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 75.5 bits (184), Expect = 1e-13 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 P+ + A G L+ L G +R P+L MG G G G +KL Sbjct: 120 PIGRTSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLINNYMSI 179 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMV-KAAYPTAFPLKHQQ 284 AE +L E +GL + ++V+S A F+ P+ V K AF + Sbjct: 180 ALNALSAEAAVLCEALGLSFDVALKVMSGTAAGKGHFTTTWPNKVMKGDLSPAFMIDLAH 239 Query: 283 KDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL +AL +A + P+P AA+ E+Y +A++ G +D+SA++E ++ Sbjct: 240 KDLGIALDVANQLHVPMPLGAASREVYNLARAAGRGREDWSAILEQVR 287
>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 324 Score = 73.9 bits (180), Expect = 4e-13 Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 7/174 (4%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG AE L F+ G E+ Y V +L+ MGK + G G G KL Sbjct: 145 PVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLA 204 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGA-------INAPMFSLKGPSMVKAAYPTAF 302 +E + L+ + GLD N E+I+ I P+ + + Y F Sbjct: 205 ISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGF 264 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL LA +A + + PIP + A+++Y+ GL ++DFS V + +K Sbjct: 265 SSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMK 318
>YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 73.9 bits (180), Expect = 4e-13 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 1/168 (0%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PV + A G L+ L G +R P+L MG G G G +KL Sbjct: 120 PVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSI 179 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAA-YPTAFPLKHQQ 284 AE +L E + L + V+V+S A F+ P+ V + AF + Sbjct: 180 ALNALSAEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAH 239 Query: 283 KDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL +AL +A + P+P AA+ E+Y A++ G QD+SA++E ++ Sbjct: 240 KDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287
>YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 73.9 bits (180), Expect = 4e-13 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 1/168 (0%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PV + A G L+ L G +R P+L MG G G G +KL Sbjct: 120 PVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSI 179 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAA-YPTAFPLKHQQ 284 AE +L E + L + V+V+S A F+ P+ V + AF + Sbjct: 180 ALNALSAEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAH 239 Query: 283 KDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL +AL +A + P+P AA+ E+Y A++ G QD+SA++E ++ Sbjct: 240 KDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287
>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)| Length = 298 Score = 73.6 bits (179), Expect = 5e-13 Identities = 57/181 (31%), Positives = 81/181 (44%), Gaps = 12/181 (6%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG A G L F+ G + R P+L+ MG++ F+ GD G G V K+ Sbjct: 120 PVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLG 179 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGP-------SMVKAAYPTAF 302 AE L L K GLDP + EV+ Q + +L P + Y F Sbjct: 180 ILMAGTAEALALGVKNGLDPAVLSEVMKQSSGGNWALNLYNPWPGVMPQAPASNGYAGGF 239 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKV-----AKSLGLADQDFSAVIEALKA 137 ++ KDL LALA A++V P A A L+ + A+ GL DFS++ + + Sbjct: 240 QVRLMNKDLGLALANAQAVQASTPLGALARNLFSLHAQADAEHEGL---DFSSIQKLYRG 296 Query: 136 K 134 K Sbjct: 297 K 297
>YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3 5'region| (Fragment) Length = 194 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/167 (28%), Positives = 79/167 (47%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG + AE+G L + GD++ + V P++ + LG VG G + K+ Sbjct: 25 PVSGGQAGAENGALTVMMGGDQAHFDTVKPVISAYSCAEL-LGPVGAGQLTKMVNQICIA 83 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQK 281 AEGL ++ GLD V+EVIS+G + + +M + Y F + +K Sbjct: 84 GVVQGLAEGLHFAKSAGLDGLKVIEVISKGRAQSWQMENRYKTMWQGQYDFGFAIDWMRK 143 Query: 280 DLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 DL +AL A +P AA ++ Y +++ D S+++ L+ Sbjct: 144 DLGIALDEARRNGSHLPVAALVDQFYSEVQAMKGNRWDTSSLLARLE 190
>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 69.7 bits (169), Expect = 7e-12 Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 7/179 (3%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG K A L F+ GDES +R P+L+ M + G G G K+ Sbjct: 117 PVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLA 176 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGA-------INAPMFSLKGPSMVKAAYPTAF 302 + AE +L+EK+GL ++ +VI+ N P+ S + F Sbjct: 177 VQQIAIAEAFVLAEKLGLSAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGF 236 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALKAKVQS 125 KDL LA+ + P + A ++Y + AD DFSAVI L+A+ + Sbjct: 237 STALMNKDLGLAMDAVAATGATAPLGSHAADIY-AKFAADHADLDFSAVIHTLRARADA 294
>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 69.7 bits (169), Expect = 7e-12 Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 7/179 (3%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG K A L F+ GDES +R P+L+ M + G G G K+ Sbjct: 117 PVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLA 176 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGA-------INAPMFSLKGPSMVKAAYPTAF 302 + AE +L+EK+GL ++ +VI+ N P+ S + F Sbjct: 177 VQQIAIAEAFVLAEKLGLSAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGF 236 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALKAKVQS 125 KDL LA+ + P + A ++Y + AD DFSAVI L+A+ + Sbjct: 237 STALMNKDLGLAMDAVAATGATAPLGSHAADIY-AKFAADHADLDFSAVIHTLRARADA 294
>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 66.6 bits (161), Expect = 6e-11 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 7/174 (4%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG A G L F+ G E+ + LL MG + Y G VG+G K+ Sbjct: 157 PVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLA 216 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINA-------PMFSLKGPSMVKAAYPTAF 302 AE + L + GLDP + ++++ + P+ + Y F Sbjct: 217 ISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSSNNYQGGF 276 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL LA A S PI + A+++Y++ S G + +DFS+V + L+ Sbjct: 277 GTTLMAKDLGLAQDSATSTKTPILLGSVAHQIYRMMCSKGYSKKDFSSVFQYLR 330
>YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-)| Length = 302 Score = 66.2 bits (160), Expect = 8e-11 Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 1/165 (0%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLG-DVGNGAVMKLXXXXXX 464 PVSG A +G + + +G + ++R+AP+L+ + + +G + G G+ +K+ Sbjct: 126 PVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLA 185 Query: 463 XXXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQ 284 + AE + L+ + G+ + + +V++ A N+ MF + +V Y + Sbjct: 186 GVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFV 245 Query: 283 KDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIE 149 KDL L A+++ P+P A+ A ++ A + G +D SAVI+ Sbjct: 246 KDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIK 290
>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 336 Score = 66.2 bits (160), Expect = 8e-11 Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 7/174 (4%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG A G L F+ G E + LL MG + Y G VG G K+ Sbjct: 158 PVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLA 217 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGP-----SMVKAA--YPTAF 302 AE + L ++GLDP + ++++ + P V +A Y F Sbjct: 218 ISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGF 277 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL LA A S PI + A+++Y++ + G + +DFS+V + L+ Sbjct: 278 GTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLR 331
>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 65.9 bits (159), Expect = 1e-10 Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 7/174 (4%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG A G L F+ G E + LL+ MG + Y G VG G K+ Sbjct: 157 PVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLA 216 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINA-------PMFSLKGPSMVKAAYPTAF 302 AE + L + GLDP + ++++ + P+ + Y F Sbjct: 217 ISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMHGVPSSNNYQGGF 276 Query: 301 PLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KDL LA A S PI + A+++Y++ S G + +DFS+V + L+ Sbjct: 277 GTTLMAKDLGLAQDSATSTKTPILLGSLAHQIYRMMCSKGYSKKDFSSVFQYLR 330
>YFJR_BACSU (O34969) Hypothetical oxidoreductase yfjR (EC 1.1.-.-)| Length = 261 Score = 65.1 bits (157), Expect = 2e-10 Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 2/169 (1%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGA-VMKLXXXXXX 464 PV G A L +TAG + PLLD + + F +G+ A K+ Sbjct: 94 PVLGRPDAAAKAALRIITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLL 153 Query: 463 XXXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAY-PTAFPLKHQ 287 + +E L+ EK GL+ +E+ S +P++ G M + + P F + Sbjct: 154 VSMLEALSESFLMMEKYGLEQKQFLEIAS-ALFGSPVYQNYGTIMAEQKFEPAGFKMSLG 212 Query: 286 QKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIEALK 140 KD LALA A+ VS +P A A ++ G D D++A+I+ +K Sbjct: 213 LKDTNLALAAAKRVSANLPLAELAKSHFESGIEKGFGDLDWAALIKCIK 261
>Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1.-.-)| Length = 301 Score = 65.1 bits (157), Expect = 2e-10 Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLG-DVGNGAVMKLXXXXXX 464 PVSG A G + + +G + ++ + P+LD + +G ++G GA +K+ Sbjct: 125 PVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLA 184 Query: 463 XXXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQ 284 + AE + L+ K G+ + + +V++ A N+ MF + +V+ Y + Sbjct: 185 GVHIAAGAEAMALASKAGIPLDVMYDVVTNAAGNSWMFENRMKHVVEGDYTPLSMVDIFV 244 Query: 283 KDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSAVIE 149 KDL L A+S+ P+ A+ A ++ A + G +D SAVI+ Sbjct: 245 KDLGLVNDTAKSLHFPLHLASTAYSMFTEASNAGYGKEDDSAVIK 289
>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| (EC 1.1.1.31) (HIBADH) Length = 299 Score = 60.5 bits (145), Expect = 4e-09 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLT-AGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXX 464 P+SG A+ L F+ AG+++ +KR +L +MGK+ LG VGNG K+ Sbjct: 120 PISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLL 179 Query: 463 XXXXXSFAEGLLLSEKVGLDPNTVVEVI--SQGAINAPMFSLKGPSMVK-----AAYPTA 305 + AE + L +GLD + ++ S G + P +++ Y Sbjct: 180 GIQMVAVAETMNLGISMGLDAKALAGIVNTSSGRCWSSDTYNPVPGVIENIPSCRGYAGG 239 Query: 304 FPLKHQQKDLRLALALAESVSQPIPTAAAANELYKV-AKSLGLADQDFSAVIEALK 140 F KDL LA + + P P + A+++Y++ A+ +DF V + LK Sbjct: 240 FGTTLMAKDLSLAQNASTNTQAPTPMGSLAHQIYRILARDPQYQAKDFGVVYQFLK 295
>Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (EC 1.1.-.-)| Length = 295 Score = 54.3 bits (129), Expect = 3e-07 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 9/167 (5%) Frame = -3 Query: 640 PVSGSKKPAEDGLLIFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXX 461 PVSG A G L + D+ ++R+ + G+ G G MKL Sbjct: 125 PVSGGAAAAAKGELAVMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNMLTF 184 Query: 460 XXXXSFAEGLLLSEKVGLDPNTVVEVISQ-----GAINAPMFSLKGPSMVKAAYPTAFPL 296 + AE L+E GLD + +V+ G A MF + ++ A P L Sbjct: 185 VSYAAAAEAQRLAEACGLDLVALGKVVRHSDSFTGGAGAIMFR-NTTAPMEPADPLRPLL 243 Query: 295 KHQ----QKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQD 167 +H +KDL LALAL E VS +P A A L ++A LG+ D Sbjct: 244 EHTRGLGEKDLSLALALGEVVSVDLPLAQLA--LQRLAAGLGVPHPD 288
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 32.7 bits (73), Expect = 0.93 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 2/171 (1%) Frame = +3 Query: 132 TLALSASMTAEKSWSARPNDLATLYSSFAAAAVGMGWDTDSARASASLRSFC*CFRGKAV 311 T +LS++ T+ S S P+ +T SS + ++ + S S S S + Sbjct: 183 TTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSS 242 Query: 312 GYAALTMEGPLRENMGALIAPCEITSTTVFGSNPTFSLKSSPSANETIMLPITMLTTSFI 491 + + + +P TST+ + S +SPS+ T + + S Sbjct: 243 SSTSTSQSSTSTSSSSTSTSPSS-TSTS------SSSTSTSPSSKSTSASSTSTSSYSTS 295 Query: 492 TAPFPTSPR*NLDLPITSSRGATLLYKDSSPAVRK--ISSPSSAGFFEPET 638 T+P TS L SS + + DS+ ++ SS +S + P T Sbjct: 296 TSPSLTSSSPTLASTSPSSTSISSTFTDSTSSLGSSIASSSTSVSLYSPST 346
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 32.7 bits (73), Expect = 0.93 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +3 Query: 480 TSFITAPFPTSPR*NLDLPITSSRGATLLYKDSSPAVRKISSPSSAGFFEPE 635 TS T P+S R + +S+RG + L+K S P SSP+S+ PE Sbjct: 372 TSTCTGGIPSSSRNAITSSYSSTRGVSQLWKRSGPTSSPFSSPASSRSQTPE 423
>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase| substrate Length = 760 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 8/93 (8%) Frame = -2 Query: 455 DGLICRRATLE*KSWVRPEYCRRGYFTRCYQCSHVLPQGPFHG--------*GCIPYCLS 300 DG +C R +E R +CR C QC+ P +G GC Sbjct: 160 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQR 219 Query: 299 PETSAEGSKAGAGPGRIGVPAHSYSCSCKRAVQ 201 P + + G+K+G P +PA + + + VQ Sbjct: 220 PTSGSGGAKSGPRPADSELPAEYLNSTLAQQVQ 252
>RUVB2_NEUCR (Q873C7) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 481 Score = 31.6 bits (70), Expect = 2.1 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 14/119 (11%) Frame = -3 Query: 442 AEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKG-PSMVKAAYPTAFPLKHQQKDLRLA 266 ++GL+ EK V+E+I QG I + G PS K A LA Sbjct: 42 SQGLVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPSTGKTA---------------LA 86 Query: 265 LALAESVSQPIP-TAAAANELYKV------------AKSLGLADQDFSAVIEALKAKVQ 128 + +A+S+ +P T AA+E+Y + KS+G+ ++ S ++E ++Q Sbjct: 87 MGMAQSLGTDVPFTTLAASEIYSLEMSKTEALTQAFRKSIGVRIKEESEIMEGEVVEIQ 145
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 30.8 bits (68), Expect = 3.5 Identities = 24/79 (30%), Positives = 36/79 (45%) Frame = +3 Query: 381 ITSTTVFGSNPTFSLKSSPSANETIMLPITMLTTSFITAPFPTSPR*NLDLPITSSRGAT 560 +TS+T S+ SS S E+ P+T TT +AP +S + P+TSS + Sbjct: 383 VTSSTTESSSAPVPTPSS-STTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTES 441 Query: 561 LLYKDSSPAVRKISSPSSA 617 S+P + SSA Sbjct: 442 ----SSAPVTSSTTESSSA 456 Score = 29.6 bits (65), Expect = 7.9 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = +3 Query: 372 PCEITSTTVFGSNPTFSLKSSPSANETIMLPITMLTTSFITAPFPT---SPR*NLDLPIT 542 P +STT S P + S S E+ P+T TT +AP PT S + P+T Sbjct: 315 PTPSSSTTESSSAPVPT--PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVT 372 Query: 543 SSRGATLLYKDSSPAVRKISSPSSA 617 SS + S+P + SSA Sbjct: 373 SSTTES----SSAPVTSSTTESSSA 393
>SEC72_SCHPO (Q9P7V5) Protein transport protein sec72| Length = 1822 Score = 30.8 bits (68), Expect = 3.5 Identities = 36/154 (23%), Positives = 63/154 (40%) Frame = -3 Query: 517 LGDVGNGAVMKLXXXXXXXXXXXSFAEGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKG 338 L +VG +V K+ G + SE L+ + VV + IN SL Sbjct: 29 LPEVGTTSVTKIINDSDNEDDENGMDLGRVASES--LEGDAVVSI----DINTEDSSLSP 82 Query: 337 PSMVKAAYPTAFPLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDFSA 158 P K+Q++DL+ E+++ P+P AA+ L K + GL + + S Sbjct: 83 AKQENEKSPEGIEQKYQEEDLKDDKKSNETIATPVPDAASRASLEK--QKSGLTNLEKST 140 Query: 157 VIEALKAKVQSSQH*TRLQPAKFECGIQIYSPIL 56 + +K Q Q ++ K + ++ P+L Sbjct: 141 HVVLIKCIEQLIQIKVCMKNEKMKNLMEQLKPLL 174
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 483 SFITAPFPTSPR*NLDLPITSSRGATLLYKDSSPAVRKISSPSSAGFFEPE 635 S T P+S R + +S+RG + L+K S P SSP+S+ PE Sbjct: 373 SACTGGIPSSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQTPE 423
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = +3 Query: 480 TSFITAPFPTSPR*NLDLPITSSRGATLLYKDSSPAVRKISSPSSAGFFEPE 635 T T+ P+S R + +S+RG + L+K + P+ SSP+S+ PE Sbjct: 375 TGAYTSGIPSSSRNAITSSYSSTRGISQLWKRNGPSSSPFSSPASSRSQTPE 426 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/76 (31%), Positives = 33/76 (43%) Frame = +3 Query: 384 TSTTVFGSNPTFSLKSSPSANETIMLPITMLTTSFITAPFPTSPR*NLDLPITSSRGATL 563 TSTT P FS P A+ + P TT+ TAP T+P L + S+ A Sbjct: 741 TSTTAPTFQPVFS-SMGPPASVPLPAPFFKQTTTPATAPTTTAP---LFTGLASATSAVA 796 Query: 564 LYKDSSPAVRKISSPS 611 +SP+ S P+ Sbjct: 797 PITSASPSTDSASKPA 812
>PHZF_PSEFL (Q51792) Phenazine biosynthesis protein phzF| Length = 278 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -3 Query: 307 AFPLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDF 164 AF L+ Q + +A S+ QPIPT A ++ K+LG++D F Sbjct: 102 AFELERQNGSV-----IAASMDQPIPTWTALGRDAELLKALGISDSTF 144
>PHZF_PSECL (Q51520) Phenazine biosynthesis protein phzF| Length = 278 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -3 Query: 307 AFPLKHQQKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLADQDF 164 AF L+ Q + +A S+ QPIPT A ++ K+LG++D F Sbjct: 102 AFELERQNGSV-----VAASMDQPIPTWTALGRDVELLKALGISDSTF 144
>SNAK_DROME (P05049) Serine protease snake precursor (EC 3.4.21.-)| Length = 435 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 488 EARG*HGDGEHDGLICRRATLE*KSWVRPEYCRRGYFTRCYQCSHVLPQGPFHG 327 E R +G H+G CRR+ R GY YQC HV+ + HG Sbjct: 78 EVRTSVSEGLHEGAFCRRSFDG----------RSGYCILAYQCLHVIREYRVHG 121
>RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal| protein L10) Length = 338 Score = 29.6 bits (65), Expect = 7.9 Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 21/162 (12%) Frame = -3 Query: 598 IFLTAGDESLYKRVAPLLDVMGKSRFYLGDVGNGAVMKLXXXXXXXXXXXSFAEGLLLSE 419 + + AGD + P+L V GK + V +G V + AE L + + Sbjct: 125 VVIPAGDTGM--PAGPILSVFGKLKVQT-KVQDGKVHVVKDTVVAKPGDVIPAEALPILQ 181 Query: 418 KVGLDPNTV---VEVISQGAINAPMFSLK-----------------GPSMVKAAYPTAFP 299 K+G+ P V ++V + P SLK V+ AYPT Sbjct: 182 KLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPTPDV 241 Query: 298 LKHQ-QKDLRLALALAESVSQPIPTAAAANELYKVAKSLGLA 176 LK K + A+ALA + P +A A VAK+ LA Sbjct: 242 LKFTISKVFKNAIALASEIGYITPESAQAVISKAVAKAYALA 283
>LIPB2_HUMAN (Q8ND30) Liprin-beta-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein-binding protein 2) (PTPRF-interacting protein-binding protein 2) Length = 876 Score = 29.6 bits (65), Expect = 7.9 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Frame = -3 Query: 439 EGLLLSEKVGLDPNTVVEVISQGAINAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRLALA 260 +G++ K G D +S G + S A+Y FP+ H +DLRLAL Sbjct: 17 DGIIAGTKTGAD-------LSDGTCEPGLAS-------PASYMNPFPVLHLIEDLRLALE 62 Query: 259 LAESVSQ--------PIPTAAAANELYKVAKS 188 + E + P PTAA E ++ + S Sbjct: 63 MLELPQERAALLSQIPGPTAAYIKEWFEESLS 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,294,018 Number of Sequences: 219361 Number of extensions: 1904062 Number of successful extensions: 5853 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5831 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
