ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 504 e-139
2gb|AY111704.1| Zea mays CL39004_1 mRNA sequence 424 e-115
3ref|NM_193608.1| Oryza sativa (japonica cultivar-group), predic... 377 e-101
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-4... 64 6e-07
7ref|NM_101628.3| Arabidopsis thaliana phosphogluconate dehydroge... 52 0.002
8gb|BT008734.1| Arabidopsis thaliana At1g17650 gene, complete cds 52 0.002
9gb|AY093135.1| Arabidopsis thaliana unknown protein (At1g17650) ... 52 0.002
10ref|XM_466265.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.036
11ref|XM_507487.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.036
12ref|XM_506829.2| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.036
13gb|AY224558.1| Oryza sativa (japonica cultivar-group) isolate 29... 48 0.036
14dbj|AB110167.1| Oryza sativa (japonica cultivar-group) mRNA for ... 48 0.036
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
16gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11... 48 0.036
17gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana... 48 0.036
18dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
19dbj|AK109435.2| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
20dbj|AK104168.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
21dbj|AK071800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
22gb|AY085690.1| Arabidopsis thaliana clone 17110 mRNA, complete s... 44 0.56
23gb|AC124992.14| Mus musculus chromosome 10, clone RP23-149L10, c... 42 2.2
24gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome... 42 2.2
25dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 2.2
26gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, com... 40 8.8
27gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.8
28ref|XM_529499.1| PREDICTED: Pan troglodytes LOC451973 (LOC451973... 40 8.8
29gb|BC078607.1| Xenopus laevis hypothetical protein LOC446927, mR... 40 8.8
30gb|AC102090.14| Mus musculus chromosome 1, clone RP23-7I3, compl... 40 8.8
31gb|AY706993.1| Homo sapiens matrix metalloproteinase 19 (MMP19) ... 40 8.8
32gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete... 40 8.8
33ref|XM_420533.1| PREDICTED: Gallus gallus similar to ENSANGP0000... 40 8.8
34ref|NM_008577.2| Mus musculus solute carrier family 3 (activator... 40 8.8
35gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, comp... 40 8.8
36gb|BT011441.1| Drosophila melanogaster RE55714 full insert cDNA 40 8.8
37gb|AF370398.1| Homo sapiens PP10764 mRNA, complete cds 40 8.8
38gb|AY358778.1| Homo sapiens clone DNA92225 MMP19 (UNQ1916) mRNA,... 40 8.8
39gb|BC030206.1| Homo sapiens matrix metallopeptidase 19, mRNA (cD... 40 8.8
40dbj|AK095340.1| Homo sapiens cDNA FLJ38021 fis, clone CTONG2012847 40 8.8
41dbj|AK094261.1| Homo sapiens cDNA FLJ36942 fis, clone BRACE2005518 40 8.8
42dbj|AK057179.1| Homo sapiens cDNA FLJ32617 fis, clone STOMA2000257 40 8.8
43ref|NM_141611.1| Drosophila melanogaster CG9746-RA (CG9746), mRNA 40 8.8
44ref|NM_002429.4| Homo sapiens matrix metallopeptidase 19 (MMP19)... 40 8.8
45ref|NM_001032360.1| Homo sapiens matrix metallopeptidase 19 (MMP... 40 8.8
46ref|XM_927712.1| PREDICTED: Homo sapiens similar to RIKEN cDNA 1... 40 8.8
47ref|XM_942032.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 8.8
48emb|BX005188.15| Zebrafish DNA sequence from clone CH211-89H11, ... 40 8.8
49dbj|AK090046.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3... 40 8.8
50gb|AC023055.40| Homo sapiens 12 BAC RP11-670P16 (Roswell Park Ca... 40 8.8
51gb|BC072431.1| Homo sapiens similar to RIKEN cDNA 1110012D08, mR... 40 8.8
52ref|XM_240464.3| PREDICTED: Rattus norvegicus ankyrin 1, erythro... 40 8.8
53emb|BX648969.1|HSM809120 Homo sapiens mRNA; cDNA DKFZp686N0460 (... 40 8.8
54gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20... 40 8.8
55gb|AF012871.1|MUSMERG2 Mus musculus potassium channel isoforms M... 40 8.8
56gb|U37791.1|HSU37791 Homo sapiens clone rasi-1 matrix metallopro... 40 8.8
57gb|U38320.1|HSU38320 Homo sapiens clone rasi-3 matrix metallopro... 40 8.8
58gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, co... 40 8.8
59dbj|D10769.1|PSEMFA Pseudomonas sp. gene for maltopentaose formi... 40 8.8
60emb|AL592482.6| Mouse DNA sequence from clone RP23-220K2 on chro... 40 8.8 
>dbj|AK064876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J16, full
            insert sequence
          Length = 1256

 Score =  504 bits (254), Expect = e-139
 Identities = 452/518 (87%)
 Strand = Plus / Minus

                                                                        
Query: 125  gctctgcactttggccttgagcgcctcaatgaccgcggagaagtcctggtcggcgaggcc 184
            ||||||| | || ||||| |||||||| || || || |||||||||||||| || || ||
Sbjct: 1090 gctctgctcctttgccttcagcgcctcgattacagcagagaagtcctggtctgcaagccc 1031

                                                                        
Query: 185  caacgatttggcaaccttgtacagctcgtttgcagctgcagctgtaggaatgggctggga 244
             | |||||| || ||||||||||||||||||||||||||  |||||||||| | ||||||
Sbjct: 1030 aagcgatttcgcgaccttgtacagctcgtttgcagctgcgactgtaggaatagactggga 971

                                                                        
Query: 245  caccgattctgccagggccagcgccagccttagatccttctgctgatgtttcaggggaaa 304
            ||||||||||||||||||||  || ||||| | ||||||||||||||| ||||| |||||
Sbjct: 970  caccgattctgccagggccaatgcgagcctcaaatccttctgctgatgcttcagaggaaa 911

                                                                        
Query: 305  ggcagtagggtatgcagccttaaccatggaagggcccttgagggagaacatgggagcatt 364
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 910  agcagtagggtatgcagctttaaccatggaagggcccttgagggagaacatgggagcact 851

                                                                        
Query: 365  gatagcaccttgtgaaataacctcgacgacagtattcgggtctaacccaactttttcact 424
            ||||||||||||||||||||||||||| | |||||| |||||||  ||||||||||| ||
Sbjct: 850  gatagcaccttgtgaaataacctcgacaagagtattggggtctaggccaactttttcgct 791

                                                                        
Query: 425  caagagtagcccttctgcaaatgagaccatcatgctccccatcaccatgttaaccacgag 484
            || ||| || ||||||| ||| || ||||||||||||||||| ||||| ||||| |||||
Sbjct: 790  caggagcagtccttctgaaaacgaaaccatcatgctccccatgaccatattaacaacgag 731

                                                                        
Query: 485  cttcattactgcgccgtttccgacatccccaagataaaatctggacttgcccatcacatc 544
            ||||||  |||| || || || || || || ||  ||||||| ||||||||||| |||||
Sbjct: 730  cttcatgtctgcacctttgccaacgtcaccgaggaaaaatcttgacttgcccataacatc 671

                                                                        
Query: 545  aagtaggggcgccactctcttgtacaaagattcatcacctgcagtaagaaagattagcag 604
            ||| ||||  |||||||| |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 670  aaggagggatgccactctattgtacaaggactcatcacctgcggtaagaaagatgagcag 611

                                                  
Query: 605  tccatcttctgctggcttttttgagcctgaaactggag 642
             |||||||||||||||||||||||||||||||||||||
Sbjct: 610  cccatcttctgctggcttttttgagcctgaaactggag 573
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>gb|AY111704.1| Zea mays CL39004_1 mRNA sequence
          Length = 865

 Score =  424 bits (214), Expect = e-115
 Identities = 438/518 (84%)
 Strand = Plus / Plus

                                                                       
Query: 125 gctctgcactttggccttgagcgcctcaatgaccgcggagaagtcctggtcggcgaggcc 184
           ||||||||||||||| || ||||| ||||| ||||| |||||||| |||||    |||||
Sbjct: 241 gctctgcactttggctttcagcgcttcaataaccgccgagaagtcgtggtcactaaggcc 300

                                                                       
Query: 185 caacgatttggcaaccttgtacagctcgtttgcagctgcagctgtaggaatgggctggga 244
            | |||||| ||| |||||||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 301 gagcgattttgcagccttgtacagctcgttcgcagctgcaactgtaggaatggactggga 360

                                                                       
Query: 245 caccgattctgccagggccagcgccagccttagatccttctgctgatgtttcaggggaaa 304
           ||||||||| ||||||||||  || ||||| |  |||||||| ||||| ||||| |||||
Sbjct: 361 caccgattccgccagggccaatgcgagcctcaagtccttctgttgatgcttcagaggaaa 420

                                                                       
Query: 305 ggcagtagggtatgcagccttaaccatggaagggcccttgagggagaacatgggagcatt 364
            |||| ||| |||||||| ||||||||||| ||||||||||| ||||||||     || |
Sbjct: 421 tgcaggaggatatgcagctttaaccatggatgggcccttgagagagaacatnnnnncact 480

                                                                       
Query: 365 gatagcaccttgtgaaataacctcgacgacagtattcgggtctaacccaactttttcact 424
           ||||||||| || |||||||||||||||| ||||||||||||||| || ||     ||||
Sbjct: 481 gatagcaccctgggaaataacctcgacgagagtattcgggtctaaaccgacnnnnncact 540

                                                                       
Query: 425 caagagtagcccttctgcaaatgagaccatcatgctccccatcaccatgttaaccacgag 484
           || ||| | ||||||||  || || ||||||||||||||||| |||||||||||||||||
Sbjct: 541 caggagcaacccttctgagaaggaaaccatcatgctccccatgaccatgttaaccacgag 600

                                                                       
Query: 485 cttcattactgcgccgtttccgacatccccaagataaaatctggacttgcccatcacatc 544
           ||||||| | || || || || ||||| ||||||||||| || ||||| ||||| |||||
Sbjct: 601 cttcattgcagcaccattgcctacatcgccaagataaaaccttgacttccccatgacatc 660

                                                                       
Query: 545 aagtaggggcgccactctcttgtacaaagattcatcacctgcagtaagaaagattagcag 604
           ||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 661 aaggaggggcgccactctcttgtacaaggactcatcacctgcagtaagaaagatgagcag 720

                                                 
Query: 605 tccatcttctgctggcttttttgagcctgaaactggag 642
            ||||||||||||||       ||||||||||||||||
Sbjct: 721 cccatcttctgctggnnnnnncgagcctgaaactggag 758
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>ref|NM_193608.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1032

 Score =  377 bits (190), Expect = e-101
 Identities = 322/366 (87%)
 Strand = Plus / Minus

                                                                        
Query: 125  gctctgcactttggccttgagcgcctcaatgaccgcggagaagtcctggtcggcgaggcc 184
            ||||||| | || ||||| |||||||| || || || |||||||||||||| || || ||
Sbjct: 1026 gctctgctcctttgccttcagcgcctcgattacagcagagaagtcctggtctgcaagccc 967

                                                                        
Query: 185  caacgatttggcaaccttgtacagctcgtttgcagctgcagctgtaggaatgggctggga 244
             | |||||| || ||||||||||||||||||||||||||  |||||||||| | ||||||
Sbjct: 966  aagcgatttcgcgaccttgtacagctcgtttgcagctgcgactgtaggaatagactggga 907

                                                                        
Query: 245  caccgattctgccagggccagcgccagccttagatccttctgctgatgtttcaggggaaa 304
            ||||||||||||||||||||  || ||||| | ||||||||||||||| ||||| |||||
Sbjct: 906  caccgattctgccagggccaatgcgagcctcaaatccttctgctgatgcttcagaggaaa 847

                                                                        
Query: 305  ggcagtagggtatgcagccttaaccatggaagggcccttgagggagaacatgggagcatt 364
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 846  agcagtagggtatgcagctttaaccatggaagggcccttgagggagaacatgggagcact 787

                                                                        
Query: 365  gatagcaccttgtgaaataacctcgacgacagtattcgggtctaacccaactttttcact 424
            ||||||||||||||||||||||||||| | |||||| |||||||  ||||||||||| ||
Sbjct: 786  gatagcaccttgtgaaataacctcgacaagagtattggggtctaggccaactttttcgct 727

                                                                        
Query: 425  caagagtagcccttctgcaaatgagaccatcatgctccccatcaccatgttaaccacgag 484
            || ||| || ||||||| ||| || ||||||||||||||||| ||||| ||||| |||||
Sbjct: 726  caggagcagtccttctgaaaacgaaaccatcatgctccccatgaccatattaacaacgag 667

                  
Query: 485  cttcat 490
            ||||||
Sbjct: 666  cttcat 661



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                       
Query: 583 ctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaactggag 642
           |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgcggtaagaaagatgagcagcccatcttctgctggcttttttgagcctgaaactggag 562
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Plus

                                                                            
Query: 280      ccttctgctgatgtttcaggggaaaggcagtagggtatgcagccttaaccatggaagggc 339
                ||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 22084739 ccttctgctgatgcttcagaggaaaagcagtagggtatgcagctttaaccatggaagggc 22084798

                                                                
Query: 340      ccttgagggagaacatgggagcattgatagcaccttgtgaaataacct 387
                ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22084799 ccttgagggagaacatgggagcactgatagcaccttgtgaaataacct 22084846



 Score =  127 bits (64), Expect = 5e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                            
Query: 125      gctctgcactttggccttgagcgcctcaatgaccgcggagaagtcctggtcggcgaggcc 184
                ||||||| | || ||||| |||||||| || || || |||||||||||||| || || ||
Sbjct: 22084480 gctctgctcctttgccttcagcgcctcgattacagcagagaagtcctggtctgcaagccc 22084539

                                                                            
Query: 185      caacgatttggcaaccttgtacagctcgtttgcagctgcagctgtaggaatgggctggga 244
                 | |||||| || ||||||||||||||||||||||||||  |||||||||| | ||||||
Sbjct: 22084540 aagcgatttcgcgaccttgtacagctcgtttgcagctgcgactgtaggaatagactggga 22084599

                                    
Query: 245      caccgattctgccagggcca 264
                ||||||||||||||||||||
Sbjct: 22084600 caccgattctgccagggcca 22084619



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                            
Query: 581      acctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaactgg 640
                |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 22085427 acctgcggtaagaaagatgagcagcccatcttctgctggcttttttgagcctgaaactgg 22085486

                  
Query: 641      ag 642
                ||
Sbjct: 22085487 ag 22085488



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                            
Query: 382      taacctcgacgacagtattcgggtctaacccaactttttcactcaagagtagcccttctg 441
                |||||||||| | |||||| |||||||  ||||||||||| |||| ||| || |||||||
Sbjct: 22084927 taacctcgacaagagtattggggtctaggccaactttttcgctcaggagcagtccttctg 22084986

                                   
Query: 442      caaatgagaccatcatgct 460
                 ||| || |||||||||||
Sbjct: 22084987 aaaacgaaaccatcatgct 22085005



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 459      ctccccatcaccatgttaaccacgagcttcat 490
                |||||||| ||||| ||||| |||||||||||
Sbjct: 22085109 ctccccatgaccatattaacaacgagcttcat 22085140
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>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1151A10
          Length = 124344

 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Plus

                                                                         
Query: 280   ccttctgctgatgtttcaggggaaaggcagtagggtatgcagccttaaccatggaagggc 339
             ||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 96252 ccttctgctgatgcttcagaggaaaagcagtagggtatgcagctttaaccatggaagggc 96311

                                                             
Query: 340   ccttgagggagaacatgggagcattgatagcaccttgtgaaataacct 387
             ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96312 ccttgagggagaacatgggagcactgatagcaccttgtgaaataacct 96359



 Score =  127 bits (64), Expect = 5e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                         
Query: 125   gctctgcactttggccttgagcgcctcaatgaccgcggagaagtcctggtcggcgaggcc 184
             ||||||| | || ||||| |||||||| || || || |||||||||||||| || || ||
Sbjct: 95993 gctctgctcctttgccttcagcgcctcgattacagcagagaagtcctggtctgcaagccc 96052

                                                                         
Query: 185   caacgatttggcaaccttgtacagctcgtttgcagctgcagctgtaggaatgggctggga 244
              | |||||| || ||||||||||||||||||||||||||  |||||||||| | ||||||
Sbjct: 96053 aagcgatttcgcgaccttgtacagctcgtttgcagctgcgactgtaggaatagactggga 96112

                                 
Query: 245   caccgattctgccagggcca 264
             ||||||||||||||||||||
Sbjct: 96113 caccgattctgccagggcca 96132



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                         
Query: 581   acctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaactgg 640
             |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 96940 acctgcggtaagaaagatgagcagcccatcttctgctggcttttttgagcctgaaactgg 96999

               
Query: 641   ag 642
             ||
Sbjct: 97000 ag 97001



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                         
Query: 382   taacctcgacgacagtattcgggtctaacccaactttttcactcaagagtagcccttctg 441
             |||||||||| | |||||| |||||||  ||||||||||| |||| ||| || |||||||
Sbjct: 96440 taacctcgacaagagtattggggtctaggccaactttttcgctcaggagcagtccttctg 96499

                                
Query: 442   caaatgagaccatcatgct 460
              ||| || |||||||||||
Sbjct: 96500 aaaacgaaaccatcatgct 96518



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 459   ctccccatcaccatgttaaccacgagcttcat 490
             |||||||| ||||| ||||| |||||||||||
Sbjct: 96622 ctccccatgaccatattaacaacgagcttcat 96653
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>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete
             sequence
          Length = 126437

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 579   tcacctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaact 638
             |||||||| |||||||| || |   |||||||||||||||||||||| || |||||||||
Sbjct: 80041 tcacctgctgtaagaaatatcaattgtccatcttctgctggctttttggaacctgaaact 80100

                 
Query: 639   ggag 642
             ||||
Sbjct: 80101 ggag 80104



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 280   ccttctgctgatgtttcaggggaaaggcagt 310
             |||||||||||||||| |||||||| |||||
Sbjct: 79217 ccttctgctgatgttttaggggaaatgcagt 79247



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 405   tctaacccaactttttcactcaagagta 432
             |||| |||||||||||||||||| ||||
Sbjct: 79479 tctagcccaactttttcactcaaaagta 79506



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 352   acatgggagcattgatagcaccttgtgaaataacct 387
             |||| |||||||| || |||||||||||||| ||||
Sbjct: 79289 acattggagcattaatggcaccttgtgaaattacct 79324
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>ref|NM_101628.3| Arabidopsis thaliana phosphogluconate dehydrogenase
           (decarboxylating) AT1G17650 mRNA, complete cds
          Length = 1242

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 579 tcacctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaact 638
           ||||||||||| ||||| |||| | | |||||||| || |||||||| || |||||||||
Sbjct: 662 tcacctgcagtgagaaatattaactgcccatcttcggcaggctttttggaacctgaaact 603

             
Query: 639 gg 640
           ||
Sbjct: 602 gg 601



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 189  gatttggcaaccttgtacagctcgtttgcagc 220
            ||||| ||||||||||| |||||||| |||||
Sbjct: 1052 gattttgcaaccttgtaaagctcgttcgcagc 1021
to top
>gb|BT008734.1| Arabidopsis thaliana At1g17650 gene, complete cds
          Length = 1032

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 579 tcacctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaact 638
           ||||||||||| ||||| |||| | | |||||||| || |||||||| || |||||||||
Sbjct: 569 tcacctgcagtgagaaatattaactgcccatcttcggcaggctttttggaacctgaaact 510

             
Query: 639 gg 640
           ||
Sbjct: 509 gg 508



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 189 gatttggcaaccttgtacagctcgtttgcagc 220
           ||||| ||||||||||| |||||||| |||||
Sbjct: 959 gattttgcaaccttgtaaagctcgttcgcagc 928
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>gb|AY093135.1| Arabidopsis thaliana unknown protein (At1g17650) mRNA, complete cds
          Length = 1164

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 579 tcacctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaact 638
           ||||||||||| ||||| |||| | | |||||||| || |||||||| || |||||||||
Sbjct: 585 tcacctgcagtgagaaatattaactgcccatcttcggcaggctttttggaacctgaaact 526

             
Query: 639 gg 640
           ||
Sbjct: 525 gg 524



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 189 gatttggcaaccttgtacagctcgtttgcagc 220
           ||||| ||||||||||| |||||||| |||||
Sbjct: 975 gattttgcaaccttgtaaagctcgttcgcagc 944
to top
>ref|XM_466265.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1187

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 819 atccttctgctggtgtttcaggggaaatgcag 788
to top
>ref|XM_507487.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA
          Length = 1235

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 822 atccttctgctggtgtttcaggggaaatgcag 791
to top
>ref|XM_506829.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA
          Length = 1267

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 851 atccttctgctggtgtttcaggggaaatgcag 820
to top
>gb|AY224558.1| Oryza sativa (japonica cultivar-group) isolate 29037 gamma
           hydroxybutyrate dehydrogenase-like protein mRNA,
           complete cds
          Length = 882

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 717 atccttctgctggtgtttcaggggaaatgcag 686
to top
>dbj|AB110167.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 12FPR024
          Length = 1163

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 800 atccttctgctggtgtttcaggggaaatgcag 769
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 278      atccttctgctgatgtttcaggggaaaggcag 309
                |||||||||||| |||||||||||||| ||||
Sbjct: 21367448 atccttctgctggtgtttcaggggaaatgcag 21367417
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>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete
             sequence
          Length = 98950

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 581   acctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaactgg 640
             ||||||||| ||||| |||| | | |||||||| || |||||||| || |||||||||||
Sbjct: 50318 acctgcagtgagaaatattaactgcccatcttcggcaggctttttggaacctgaaactgg 50377



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 189   gatttggcaaccttgtacagctcgtttgcagc 220
             ||||| ||||||||||| |||||||| |||||
Sbjct: 49428 gattttgcaaccttgtaaagctcgttcgcagc 49459
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>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I,
              complete sequence
          Length = 127968

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                          
Query: 581    acctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaactgg 640
              ||||||||| ||||| |||| | | |||||||| || |||||||| || |||||||||||
Sbjct: 124307 acctgcagtgagaaatattaactgcccatcttcggcaggctttttggaacctgaaactgg 124366



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 189    gatttggcaaccttgtacagctcgtttgcagc 220
              ||||| ||||||||||| |||||||| |||||
Sbjct: 123417 gattttgcaaccttgtaaagctcgttcgcagc 123448
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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 278   atccttctgctgatgtttcaggggaaaggcag 309
             |||||||||||| |||||||||||||| ||||
Sbjct: 27401 atccttctgctggtgtttcaggggaaatgcag 27370
to top
>dbj|AK109435.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H04, full
           insert sequence
          Length = 1220

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 848 atccttctgctggtgtttcaggggaaatgcag 817
to top
>dbj|AK104168.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E09, full
           insert sequence
          Length = 1187

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 819 atccttctgctggtgtttcaggggaaatgcag 788
to top
>dbj|AK071800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114G06, full
           insert sequence
          Length = 1235

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 278 atccttctgctgatgtttcaggggaaaggcag 309
           |||||||||||| |||||||||||||| ||||
Sbjct: 822 atccttctgctggtgtttcaggggaaatgcag 791
to top
>gb|AY085690.1| Arabidopsis thaliana clone 17110 mRNA, complete sequence
          Length = 1156

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 579 tcacctgcagtaagaaagattagcagtccatcttctgctggcttttttgagcctgaaact 638
           ||||||||||| || || |||| | | |||||||| || |||||||| || |||||||||
Sbjct: 600 tcacctgcagtgaggaatattaactgcccatcttcggcaggctttttggaacctgaaact 541

             
Query: 639 gg 640
           ||
Sbjct: 540 gg 539



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 189 gatttggcaaccttgtacagctcgtttgcagc 220
           ||||| ||||||||||| |||||||| |||||
Sbjct: 990 gattttgcaaccttgtaaagctcgttcgcagc 959
to top
>gb|AC124992.14| Mus musculus chromosome 10, clone RP23-149L10, complete sequence
          Length = 194736

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 220    ctgcagctgtaggaatgggctggga 244
              ||||||||||||||||||| |||||
Sbjct: 178545 ctgcagctgtaggaatggggtggga 178569
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>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence
          Length = 178858

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 220    ctgcagctgtaggaatgggctggga 244
              ||||||||||||||||||| |||||
Sbjct: 167571 ctgcagctgtaggaatggggtggga 167547
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 614     tgctggcttttttgagcctga 634
               |||||||||||||||||||||
Sbjct: 1099048 tgctggcttttttgagcctga 1099028
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>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence
          Length = 185733

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ttctgctgatgtttcagggg 301
              ||||||||||||||||||||
Sbjct: 104488 ttctgctgatgtttcagggg 104507
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 256     ccagggccagcgccagccttagatccttctgctgatgtttcaggggaaaggc 307
               ||||||| | ||||||||  ||||||||||||  ||| |||||||| |||||
Sbjct: 3396463 ccagggcaaccgccagccgcagatccttctgcatatgcttcagggggaaggc 3396412
to top
>ref|XM_529499.1| PREDICTED: Pan troglodytes LOC451973 (LOC451973), mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gagggagaacatgggagcat 363
           ||||||||||||||||||||
Sbjct: 700 gagggagaacatgggagcat 719
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>gb|BC078607.1| Xenopus laevis hypothetical protein LOC446927, mRNA (cDNA clone
           IMAGE:6931340), partial cds
          Length = 1181

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gagctctgcactttggcctt 142
           ||||||||||||||||||||
Sbjct: 806 gagctctgcactttggcctt 787
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>gb|AC102090.14| Mus musculus chromosome 1, clone RP23-7I3, complete sequence
          Length = 183269

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   tgggagcattgatagcacct 374
             ||||||||||||||||||||
Sbjct: 21954 tgggagcattgatagcacct 21973
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>gb|AY706993.1| Homo sapiens matrix metalloproteinase 19 (MMP19) gene, complete cds
          Length = 11210

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 8440 gagggagaacatgggagcat 8421
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>gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete sequence
          Length = 162593

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   aaatgagaccatcatgctcc 462
             ||||||||||||||||||||
Sbjct: 56839 aaatgagaccatcatgctcc 56820
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>ref|XM_420533.1| PREDICTED: Gallus gallus similar to ENSANGP00000019296 (LOC422574),
           mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gcagctgcagctgtaggaat 235
           ||||||||||||||||||||
Sbjct: 313 gcagctgcagctgtaggaat 332
to top
>ref|NM_008577.2| Mus musculus solute carrier family 3 (activators of dibasic and
            neutral amino acid transport), member 2 (Slc3a2), mRNA
          Length = 2538

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  ttaaccatggaagggccctt 343
            ||||||||||||||||||||
Sbjct: 2207 ttaaccatggaagggccctt 2188
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>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence
          Length = 242418

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    ttaaccatggaagggccctt 343
              ||||||||||||||||||||
Sbjct: 169983 ttaaccatggaagggccctt 170002
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>gb|BT011441.1| Drosophila melanogaster RE55714 full insert cDNA
          Length = 2933

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  aaatgagaccatcatgctcc 462
            ||||||||||||||||||||
Sbjct: 1252 aaatgagaccatcatgctcc 1233
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>gb|AF370398.1| Homo sapiens PP10764 mRNA, complete cds
          Length = 1598

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 1536 gagggagaacatgggagcat 1555
to top
>gb|AY358778.1| Homo sapiens clone DNA92225 MMP19 (UNQ1916) mRNA, complete cds
          Length = 681

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gagggagaacatgggagcat 363
           ||||||||||||||||||||
Sbjct: 637 gagggagaacatgggagcat 656
to top
>gb|BC030206.1| Homo sapiens matrix metallopeptidase 19, mRNA (cDNA clone
            IMAGE:5209132), with apparent retained intron
          Length = 3939

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 3071 gagggagaacatgggagcat 3052
to top
>dbj|AK095340.1| Homo sapiens cDNA FLJ38021 fis, clone CTONG2012847
          Length = 2787

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 2743 gagggagaacatgggagcat 2762
to top
>dbj|AK094261.1| Homo sapiens cDNA FLJ36942 fis, clone BRACE2005518
          Length = 1949

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 1905 gagggagaacatgggagcat 1924
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>dbj|AK057179.1| Homo sapiens cDNA FLJ32617 fis, clone STOMA2000257
          Length = 2240

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 2196 gagggagaacatgggagcat 2215
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>ref|NM_141611.1| Drosophila melanogaster CG9746-RA (CG9746), mRNA
          Length = 4188

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  aaatgagaccatcatgctcc 462
            ||||||||||||||||||||
Sbjct: 1251 aaatgagaccatcatgctcc 1232
to top
>ref|NM_002429.4| Homo sapiens matrix metallopeptidase 19 (MMP19), transcript variant
            1, mRNA
          Length = 3262

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 2484 gagggagaacatgggagcat 2465
to top
>ref|NM_001032360.1| Homo sapiens matrix metallopeptidase 19 (MMP19), transcript variant
            2, mRNA
          Length = 2915

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 2137 gagggagaacatgggagcat 2118
to top
>ref|XM_927712.1| PREDICTED: Homo sapiens similar to RIKEN cDNA 1110012D08 (LOC440104),
            mRNA
          Length = 1961

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 1909 gagggagaacatgggagcat 1928
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>ref|XM_942032.1| PREDICTED: Homo sapiens hypothetical protein LOC652541 (LOC652541),
           mRNA
          Length = 349

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gagggagaacatgggagcat 363
           ||||||||||||||||||||
Sbjct: 310 gagggagaacatgggagcat 329
to top
>emb|BX005188.15| Zebrafish DNA sequence from clone CH211-89H11, complete sequence
          Length = 202570

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gatttggcaaccttgtacag 208
              ||||||||||||||||||||
Sbjct: 183116 gatttggcaaccttgtacag 183097
to top
>dbj|AK090046.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN
            full-length enriched library, clone:G430076M17
            product:solute carrier family 3 (activators of dibasic
            and neutral amino acid transport), member 2, full insert
            sequence
          Length = 2538

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  ttaaccatggaagggccctt 343
            ||||||||||||||||||||
Sbjct: 2207 ttaaccatggaagggccctt 2188
to top
>gb|AC023055.40| Homo sapiens 12 BAC RP11-670P16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 118052

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gagggagaacatgggagcat 363
             ||||||||||||||||||||
Sbjct: 48346 gagggagaacatgggagcat 48365
to top
>gb|BC072431.1| Homo sapiens similar to RIKEN cDNA 1110012D08, mRNA (cDNA clone
            IMAGE:5726603)
          Length = 2003

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 1912 gagggagaacatgggagcat 1931
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>ref|XM_240464.3| PREDICTED: Rattus norvegicus ankyrin 1, erythroid (predicted)
            (Ank1_predicted), mRNA
          Length = 8028

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 555  gccactctcttgtacaaaga 574
            ||||||||||||||||||||
Sbjct: 4043 gccactctcttgtacaaaga 4062
to top
>emb|BX648969.1|HSM809120 Homo sapiens mRNA; cDNA DKFZp686N0460 (from clone DKFZp686N0460)
          Length = 2178

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 2117 gagggagaacatgggagcat 2136
to top
>gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20 of 118 of the
            complete sequence
          Length = 224614

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 443  aaatgagaccatcatgctcc 462
            ||||||||||||||||||||
Sbjct: 6467 aaatgagaccatcatgctcc 6486
to top
>gb|AF012871.1|MUSMERG2 Mus musculus potassium channel isoforms Merg1a, Merg1a', and Merg1b
             (Merg1) gene, exons 3-15 and complete cds
          Length = 13731

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ttctgctgatgtttcagggg 301
             ||||||||||||||||||||
Sbjct: 11676 ttctgctgatgtttcagggg 11695
to top
>gb|U37791.1|HSU37791 Homo sapiens clone rasi-1 matrix metalloproteinase RASI-1 mRNA,
            complete cds
          Length = 3222

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 2444 gagggagaacatgggagcat 2425
to top
>gb|U38320.1|HSU38320 Homo sapiens clone rasi-3 matrix metalloproteinase RASI-1 mRNA,
            splice variant, complete cds
          Length = 3826

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gagggagaacatgggagcat 363
            ||||||||||||||||||||
Sbjct: 3043 gagggagaacatgggagcat 3024
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>gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, complete sequence
          Length = 235495

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   cagccttaaccatggaaggg 338
             ||||||||||||||||||||
Sbjct: 78980 cagccttaaccatggaaggg 78961
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>dbj|D10769.1|PSEMFA Pseudomonas sp. gene for maltopentaose forming amylase, complete
           cds
          Length = 3496

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 gccagggccagcgccagcct 274
           ||||||||||||||||||||
Sbjct: 745 gccagggccagcgccagcct 726
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>emb|AL592482.6| Mouse DNA sequence from clone RP23-220K2 on chromosome 1, complete
             sequence
          Length = 124174

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   tgggagcattgatagcacct 374
             ||||||||||||||||||||
Sbjct: 92319 tgggagcattgatagcacct 92338


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,253,809
Number of Sequences: 3902068
Number of extensions: 5253809
Number of successful extensions: 97086
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96861
Number of HSP's gapped (non-prelim): 220
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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