ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal13h22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19, complete sequence Length = 151598 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 403 aagcattaaaaaccatgttaaaatata 429 ||||||||||||| ||||||||||||| Sbjct: 138070 aagcattaaaaacaatgttaaaatata 138044
>gb|AC161808.8| Mus musculus chromosome 5, clone RP24-386J15, complete sequence Length = 184815 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 attttcttgtttgtaattttcaaatc 163 |||||||||||||| ||||||||||| Sbjct: 167276 attttcttgtttgtcattttcaaatc 167251
>gb|AC127027.13| Mus musculus chromosome 5, clone RP23-236G19, complete sequence Length = 195654 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 attttcttgtttgtaattttcaaatc 163 |||||||||||||| ||||||||||| Sbjct: 63440 attttcttgtttgtcattttcaaatc 63415
>emb|AL929403.9| Human DNA sequence from clone RP13-438O9 on chromosome 6, complete sequence Length = 86576 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 cattttcttgtttgtaattttc 158 |||||||||||||||||||||| Sbjct: 84176 cattttcttgtttgtaattttc 84197
>gb|AC025039.7| Homo sapiens chromosome 10 clone RP11-457M15, complete sequence Length = 172790 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 aaaatatagtttgaagtagaaa 443 |||||||||||||||||||||| Sbjct: 133470 aaaatatagtttgaagtagaaa 133449
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 ttttcttgtttgtaattttcaa 160 |||||||||||||||||||||| Sbjct: 2290675 ttttcttgtttgtaattttcaa 2290696 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 atattttcgatacattttct 144 |||||||||||||||||||| Sbjct: 3050865 atattttcgatacattttct 3050846
>gb|DQ206543.1| Suberites fuscus isolate TOA59 P-type ATPase mRNA, partial cds Length = 985 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 ttttcttgtttgtaattttcaa 160 |||||||||||||||||||||| Sbjct: 721 ttttcttgtttgtaattttcaa 700
>emb|AL772130.15| Mouse DNA sequence from clone RP23-230O14 on chromosome 4, complete sequence Length = 72407 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 gtggatgcaaaacaaaacaaaa 546 |||||||||||||||||||||| Sbjct: 32281 gtggatgcaaaacaaaacaaaa 32260
>emb|AL807251.2| Human DNA sequence from clone RP11-425M20 on chromosome 6, complete sequence Length = 40767 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 cattttcttgtttgtaattttc 158 |||||||||||||||||||||| Sbjct: 38367 cattttcttgtttgtaattttc 38388
>gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, complete sequence Length = 189211 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 tgtatcaatatataaattttt 470 ||||||||||||||||||||| Sbjct: 34899 tgtatcaatatataaattttt 34919
>gb|AC125160.3| Mus musculus BAC clone RP24-409P4 from chromosome 7, complete sequence Length = 178643 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 21403 tggatgcaaaacaaaacaaaa 21383
>gb|AC136518.3| Mus musculus BAC clone RP23-304K22 from chromosome 16, complete sequence Length = 206486 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 162974 tggatgcaaaacaaaacaaaa 162954
>gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, complete sequence Length = 212604 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 30484 tggatgcaaaacaaaacaaaa 30464
>gb|U41273.1| Caenorhabditis elegans cosmid C26B9, complete sequence Length = 24378 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 ttgagaaaattttgtttataa 371 ||||||||||||||||||||| Sbjct: 17676 ttgagaaaattttgtttataa 17656
>emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on chromosome 13 Contains the 3' end of the gene for androgen-induced prostate proliferative shutoff associated protein (AS3) (CG008, FLJ23236, KIAA0979), complete sequence Length = 137246 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 71299 tggatgcaaaacaaaacaaaa 71279
>emb|AL161932.15| Human DNA sequence from clone RP11-241I20 on chromosome 10 Contains a ribosomal protein L34 (RPL34) pseudogene, the KIF5B gene for kinesin family member 5B (kinesin 1 (110-120kD)), a ribosomal protein S4 pseudogene, part of a novel pseudogene, a pseudogene similar to part of RAB18 (RAB18, member RAS oncogene family) and a CpG island, complete sequence Length = 143423 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 attttgtttataatggattttcttg 383 ||||||||||| ||||||||||||| Sbjct: 120096 attttgtttatcatggattttcttg 120072
>emb|AL139342.7| Human DNA sequence from clone RP5-1016N21 on chromosome 1q42.13-43 Contains the 5' end of a novel gene (FLJ11383), complete sequence Length = 151553 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 aaatatgtgtgtatcaatata 461 ||||||||||||||||||||| Sbjct: 981 aaatatgtgtgtatcaatata 1001
>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the 3' end of the KIAA0979 gene and part of a novel gene, complete sequence Length = 168487 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 70782 tggatgcaaaacaaaacaaaa 70762
>emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1 Contains the 5' end of the KCNJ10 gene for potassium inwardly-rectifying channel subfamily J member 10, a novel gene, the KCNJ9 gene for potassium inwardly-rectifying channel subfamily J member 9, the IGSF8 gene for immunoglobulin superfamily member 8, the ATP1A2 gene for Na+/K+ transporting ATPase alpha 2 (+) polypeptide, the ATP1A4 gene for Na+/K+ transporting ATPase alpha 4 (+) polypeptide, the CASQ1 gene for calsequestrin 1 (fast-twitch, skeletal muscle), a novel gene, the PEA15 gene for phosphoprotein enriched in astrocytes 15 and four CpG islands, complete sequence Length = 170834 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 143965 tggatgcaaaacaaaacaaaa 143985
>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4 Length = 205065 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ttttgcaacacagctttgcat 37 ||||||||||||||||||||| Sbjct: 148248 ttttgcaacacagctttgcat 148228
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 aagaaataacacatgtatatt 129 ||||||||||||||||||||| Sbjct: 27671 aagaaataacacatgtatatt 27651
>emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 42 Length = 195068 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ttttgcaacacagctttgcat 37 ||||||||||||||||||||| Sbjct: 105302 ttttgcaacacagctttgcat 105282
>emb|CR293525.10| Zebrafish DNA sequence from clone CH211-142B9 in linkage group 12, complete sequence Length = 155553 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 aaaaccatgttaaaatatagt 431 ||||||||||||||||||||| Sbjct: 85020 aaaaccatgttaaaatatagt 85040
>emb|BX511222.10| Zebrafish DNA sequence from clone DKEY-250J7 in linkage group 18, complete sequence Length = 151023 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 gcattaaaaaccatgttaaaatatagttt 433 |||||||| ||||||||||||||| |||| Sbjct: 24817 gcattaaataccatgttaaaatattgttt 24789
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 atacattttcttgtttgtaat 154 ||||||||||||||||||||| Sbjct: 350774 atacattttcttgtttgtaat 350794
>gb|AC158403.4| Mus musculus chromosome 3, clone RP24-211L17, complete sequence Length = 156964 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 tataatggattttcttgattt 387 ||||||||||||||||||||| Sbjct: 121702 tataatggattttcttgattt 121682
>gb|AC112996.16| Mus musculus chromosome 3, clone RP24-482I9, complete sequence Length = 157999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 tataatggattttcttgattt 387 ||||||||||||||||||||| Sbjct: 59298 tataatggattttcttgattt 59278
>emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, complete sequence Length = 163495 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 gcattaaaaaccatgttaaaatatagttt 433 |||||||| ||||||||||||||| |||| Sbjct: 156407 gcattaaataccatgttaaaatattgttt 156379
>emb|BX539308.3| Zebrafish DNA sequence from clone DKEYP-84C8 in linkage group 1, complete sequence Length = 176769 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 acattttcttgtttgtaattt 156 ||||||||||||||||||||| Sbjct: 62962 acattttcttgtttgtaattt 62982
>gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, complete sequence Length = 199471 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 138 attttcttgtttgtaattttcaaatcacc 166 ||||| |||||||||||||| |||||||| Sbjct: 57731 atttttttgtttgtaattttaaaatcacc 57703
>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome Length = 641454 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 tgtatcaatatataaattttt 470 ||||||||||||||||||||| Sbjct: 426788 tgtatcaatatataaattttt 426768
>emb|AL831758.22| Zebrafish DNA sequence from clone BUSM1-139E12 in linkage group 23, complete sequence Length = 106523 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 acatgttggatgcagcaaaatctgg 99 ||||||||||||||| ||||||||| Sbjct: 101785 acatgttggatgcaggaaaatctgg 101761
>emb|AL833789.20| Zebrafish DNA sequence from clone DKEY-69O7 in linkage group 12, complete sequence Length = 175664 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 aaaaccatgttaaaatatagt 431 ||||||||||||||||||||| Sbjct: 94628 aaaaccatgttaaaatatagt 94648
>gb|AC006101.3|AC006101 citb_338_f_24, complete sequence Length = 148278 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 attttgtttataatggattttcttg 383 ||||||||||| ||||||||||||| Sbjct: 110449 attttgtttatcatggattttcttg 110425
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ggattttcttgatttacttgt 393 ||||||||||||||||||||| Sbjct: 1880754 ggattttcttgatttacttgt 1880774
>emb|CT030638.12| Mouse DNA sequence from clone RP23-340M21 on chromosome 14, complete sequence Length = 223278 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 atgtgtgtatcaatatataaa 465 ||||||||||||||||||||| Sbjct: 76216 atgtgtgtatcaatatataaa 76236
>emb|CR925758.10| Zebrafish DNA sequence from clone DKEY-37O3 in linkage group 17, complete sequence Length = 39625 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 tacattttcttgtttgtaattttca 159 ||||||||||||||| ||||||||| Sbjct: 23154 tacattttcttgtttataattttca 23130
>gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome 14, complete sequence Length = 186187 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 atgtgtgtatcaatatataaa 465 ||||||||||||||||||||| Sbjct: 168668 atgtgtgtatcaatatataaa 168688
>emb|AL713988.6| Mouse DNA sequence from clone RP23-368O20 on chromosome 1, complete sequence Length = 70137 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggatgcaaaacaaaacaaaa 546 ||||||||||||||||||||| Sbjct: 30307 tggatgcaaaacaaaacaaaa 30287
>ref|NM_106328.1| Arabidopsis thaliana unknown protein AT1G76780 mRNA, complete cds Length = 5616 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 atgcaaaacaaaacaaaatt 548 |||||||||||||||||||| Sbjct: 4577 atgcaaaacaaaacaaaatt 4596
>gb|AC163666.2| Mus musculus BAC clone RP23-46B12 from chromosome 9, complete sequence Length = 213408 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 159721 ggatgcaaaacaaaacaaaa 159740
>gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map human ortholog p11.4, complete sequence Length = 147595 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 aaatcgtaattattataaag 510 |||||||||||||||||||| Sbjct: 23871 aaatcgtaattattataaag 23890
>gb|BC085564.1| Danio rerio zgc:103602, mRNA (cDNA clone MGC:103602 IMAGE:7249090), complete cds Length = 1799 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ttgacacttcttgagaaaat 360 |||||||||||||||||||| Sbjct: 1142 ttgacacttcttgagaaaat 1123
>ref|XM_629651.1| Dictyostelium discoideum hypothetical protein (DDB0184429), partial mRNA Length = 6255 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gtatcaatatataaattttt 470 |||||||||||||||||||| Sbjct: 4715 gtatcaatatataaattttt 4696
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 544628 ggatgcaaaacaaaacaaaa 544609
>gb|AC115868.12| Mus musculus chromosome 7, clone RP24-329F21, complete sequence Length = 181717 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tttgtttataatggattttc 380 |||||||||||||||||||| Sbjct: 171619 tttgtttataatggattttc 171600
>gb|AC115855.9| Mus musculus chromosome 3, clone RP24-277E17, complete sequence Length = 182349 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 atatgtgtgtatcaatatataaat 466 |||||||||||| ||||||||||| Sbjct: 38098 atatgtgtgtataaatatataaat 38075
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 gcaaaacaaaacaaaatttc 550 |||||||||||||||||||| Sbjct: 19904 gcaaaacaaaacaaaatttc 19885
>gb|AE006044.1| Pasteurella multocida subsp. multocida str. Pm70 section 11 of 204 of the complete genome Length = 11317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 645 ctgagatttatgcaaatcaa 664 |||||||||||||||||||| Sbjct: 3433 ctgagatttatgcaaatcaa 3452
>gb|AC125028.8| Mus musculus chromosome 16, clone RP24-85G10, complete sequence Length = 269788 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 ttcttgagaaaattttgtttataa 371 ||||||||||||| |||||||||| Sbjct: 143567 ttcttgagaaaatattgtttataa 143590
>gb|AC147831.2| Xenopus tropicalis clone CH216-159I14, complete sequence Length = 145109 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atagtttgaagtagaaatat 446 |||||||||||||||||||| Sbjct: 57873 atagtttgaagtagaaatat 57892
>gb|AC087253.2| Pan troglodytes clone RP43-150N20, complete sequence Length = 126559 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 87848 ggatgcaaaacaaaacaaaa 87829
>gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, complete sequence Length = 157001 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gcaaaacaaaacaaaatttc 550 |||||||||||||||||||| Sbjct: 56689 gcaaaacaaaacaaaatttc 56708
>gb|AC102589.9| Mus musculus chromosome 8, clone RP23-334O19, complete sequence Length = 234829 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 63984 ggatgcaaaacaaaacaaaa 64003
>gb|AC006812.1| Caenorhabditis elegans cosmid Y64H9A, complete sequence Length = 16034 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 tgtgtgtatcaatatataaatttt 469 ||||||| |||||||||||||||| Sbjct: 2838 tgtgtgtttcaatatataaatttt 2815
>gb|AC126549.4| Mus musculus BAC clone RP24-326I12 from chromosome 13, complete sequence Length = 189739 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gcattaaaaaccatgttaaa 424 |||||||||||||||||||| Sbjct: 68832 gcattaaaaaccatgttaaa 68851
>gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosome 16, complete sequence Length = 186172 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tgtatcaatatataaatttt 469 |||||||||||||||||||| Sbjct: 95203 tgtatcaatatataaatttt 95184
>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence Length = 231319 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatgtgtgtatcaatatat 462 |||||||||||||||||||| Sbjct: 60014 atatgtgtgtatcaatatat 60033
>ref|XM_740448.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000384.02.0) partial mRNA Length = 783 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ttgtttgtaattttcaaatc 163 |||||||||||||||||||| Sbjct: 494 ttgtttgtaattttcaaatc 475
>gb|AC099798.4| Homo sapiens BAC clone RP11-559E21 from 7, complete sequence Length = 131328 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 aaatatagtttgaagtagaa 442 |||||||||||||||||||| Sbjct: 56487 aaatatagtttgaagtagaa 56468
>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence Length = 233422 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 154890 ggatgcaaaacaaaacaaaa 154871
>gb|U29487.1| Caenorhabditis elegans cosmid C09C7, complete sequence Length = 15688 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tgtttgtaattttcaaatca 164 |||||||||||||||||||| Sbjct: 4085 tgtttgtaattttcaaatca 4066
>gb|AC142342.1| Pan troglodytes BAC clone RP43-45D19 from 7, complete sequence Length = 171571 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 91701 ggatgcaaaacaaaacaaaa 91720
>emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in linkage group 9, complete sequence Length = 214040 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 435 aagtagaaatatgtgtgtatcaatatat 462 ||||| |||||| ||||||||||||||| Sbjct: 52600 aagtaaaaatatttgtgtatcaatatat 52573
>gb|AC096917.3| Homo sapiens chromosome 3 clone RP11-94D19, complete sequence Length = 170184 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 aaaattttgtttataatggatttt 379 |||||||||| ||||||||||||| Sbjct: 52612 aaaattttgtatataatggatttt 52635
>gb|AC146910.16| Medicago truncatula clone mth2-59i21, complete sequence Length = 109724 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cagcaaaatctgggtagcga 106 |||||||||||||||||||| Sbjct: 14417 cagcaaaatctgggtagcga 14436
>gb|AC110225.5| Mus musculus chromosome 7, clone RP24-324L10, complete sequence Length = 172802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tttgtttataatggattttc 380 |||||||||||||||||||| Sbjct: 106084 tttgtttataatggattttc 106103
>emb|AL627402.10| Human DNA sequence from clone RP11-204C16 on chromosome X Contains part of the CASK gene for calcium/calmodulin-dependent serine protein kinase (MAGUK family), the GPR34 gene for G protein-coupled receptor 34, the GPR82 gene for G protein-coupled receptor 82, a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ) pseudogene and a CpG island, complete sequence Length = 132290 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 aaatcgtaattattataaag 510 |||||||||||||||||||| Sbjct: 32152 aaatcgtaattattataaag 32171
>emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on chromosome 1 Contains STSs and GSSs, complete sequence Length = 130715 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 atacattttcttgtttgtaatttt 157 |||||||||||| ||||||||||| Sbjct: 8075 atacattttcttatttgtaatttt 8098
>emb|AL357518.15| Human DNA sequence from clone RP11-679B17 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 115378 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ataatggattttcttgattt 387 |||||||||||||||||||| Sbjct: 109892 ataatggattttcttgattt 109911
>emb|AL353587.11| Human DNA sequence from clone RP13-178D16 on chromosome Xq11.1-13.1 Contains an actin-related protein 3 (ACTR3) pseudogene and a novel pseudogene, complete sequence Length = 49852 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ttgtttataatggattttct 381 |||||||||||||||||||| Sbjct: 31617 ttgtttataatggattttct 31636
>emb|AL158158.14| Human DNA sequence from clone RP11-427L11 on chromosome 9q31.2-32 Contains the TXN gene for thioredoxin, the gene for a novel protein similar to thioredoxin, the 3' end of the gene for the likely ortholog of mouse polydom (POLYDOM) and two CpG islands, complete sequence Length = 194835 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 acatacttcataaaaattga 344 |||||||||||||||||||| Sbjct: 97335 acatacttcataaaaattga 97316
>emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097P24 on chromosome 20p11.21-12.3 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 133072 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gaagtagaaatatgtgtgta 453 |||||||||||||||||||| Sbjct: 58582 gaagtagaaatatgtgtgta 58563
>emb|AL645745.7| Mouse DNA sequence from clone RP23-213G18 on chromosome 13 contains an H+ transporting mitochondrial F0 complex ATP synthase f2 (Atp5j2) pseudogene, the Irf4 gene for interferon regulatory factor 4 and the 3' end of the gene for 2410030I24RIK protein (ortholog of human SEC5), complete sequence Length = 137942 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 50174 ggatgcaaaacaaaacaaaa 50193
>ref|NM_001007387.1| Danio rerio zgc:103602 (zgc:103602), mRNA Length = 1799 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ttgacacttcttgagaaaat 360 |||||||||||||||||||| Sbjct: 1142 ttgacacttcttgagaaaat 1123
>gb|AF520014.1| Populus tremula x Populus termuloides transgenic line Esch5:35S-Ac-rolC#2 isolate SK456 with Zea mays Ac element, partial sequence Length = 480 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ctaaacacaaaagttcttgt 587 |||||||||||||||||||| Sbjct: 355 ctaaacacaaaagttcttgt 374
>gb|AC154607.2| Mus musculus BAC clone RP23-331D17 from chromosome 16, complete sequence Length = 202496 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 atatgtgtgtatcaatatataaat 466 |||||||||||| ||||||||||| Sbjct: 43117 atatgtgtgtataaatatataaat 43140
>gb|AC084881.19| Homo sapiens 12 BAC RP11-768F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194598 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 45334 ggatgcaaaacaaaacaaaa 45353
>gb|AC073866.16| Homo sapiens 12q BAC RP11-120B18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153756 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 148563 ggatgcaaaacaaaacaaaa 148582
>gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, complete sequence Length = 181460 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 atatgtgtgtatcaatatataaat 466 ||||||||||||| |||||||||| Sbjct: 115441 atatgtgtgtatccatatataaat 115418
>gb|AC090982.4| Homo sapiens chromosome 15, clone RP11-88O16, complete sequence Length = 195549 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 atatgtgtgtatcaatatataaat 466 ||||||||||||| |||||||||| Sbjct: 166002 atatgtgtgtatccatatataaat 166025
>gb|AC009075.7| Homo sapiens chromosome 16 clone RP11-328J14, complete sequence Length = 189983 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aatgctagaatatttcttta 208 |||||||||||||||||||| Sbjct: 97161 aatgctagaatatttcttta 97180
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gcaaaacaaaacaaaatttc 550 |||||||||||||||||||| Sbjct: 129996 gcaaaacaaaacaaaatttc 130015
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR14B02, complete sequence Length = 194036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 taaaaaccatgttaaaatat 428 |||||||||||||||||||| Sbjct: 7336 taaaaaccatgttaaaatat 7317
>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone BACR01E19, complete sequence Length = 161009 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 atttatgcaaatcaaagccg 669 |||||||||||||||||||| Sbjct: 113162 atttatgcaaatcaaagccg 113181
>gb|AC073181.8|AC073181 Homo sapiens clone RP13-493F23, complete sequence Length = 105036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 aaatatagtttgaagtagaa 442 |||||||||||||||||||| Sbjct: 64074 aaatatagtttgaagtagaa 64093
>gb|AC138623.1| Homo sapiens BAC clone RP11-1251L1 from 2, complete sequence Length = 91428 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aagaagaaataacacatgta 125 |||||||||||||||||||| Sbjct: 43081 aagaagaaataacacatgta 43062
>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence Length = 176316 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 attttcttgtttgtaattttcaaa 161 ||||||||||||||||| |||||| Sbjct: 64256 attttcttgtttgtaatattcaaa 64233
>gb|AC004470.2| Homo sapiens X BAC GS1-433O24 (Genome Systems Human BAC Library) complete sequence Length = 206809 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ttttgtttataatggatttt 379 |||||||||||||||||||| Sbjct: 157202 ttttgtttataatggatttt 157183
>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete sequence Length = 87684 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 atgcaaaacaaaacaaaatt 548 |||||||||||||||||||| Sbjct: 57989 atgcaaaacaaaacaaaatt 58008
>gb|AC073912.38| Homo sapiens 12 BAC RP11-989F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211550 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cacatcatattgtattccag 283 |||||||||||||||||||| Sbjct: 193852 cacatcatattgtattccag 193871
>gb|AC090809.9| Homo sapiens chromosome 8, clone RP11-89G22, complete sequence Length = 170261 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tgcaaaacaaaacaaaattt 549 |||||||||||||||||||| Sbjct: 150111 tgcaaaacaaaacaaaattt 150092
>gb|AC124076.5| Homo sapiens chromosome 8, clone RP11-962G15, complete sequence Length = 183098 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 tgcaaaacaaaacaaaattt 549 |||||||||||||||||||| Sbjct: 154384 tgcaaaacaaaacaaaattt 154403
>emb|BX005263.10| Mouse DNA sequence from clone RP23-395K13 on chromosome X, complete sequence Length = 175998 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 taagcattaaaaaccatgtt 421 |||||||||||||||||||| Sbjct: 33522 taagcattaaaaaccatgtt 33541
>emb|AL928622.9| Zebrafish DNA sequence from clone DKEY-31O13, complete sequence Length = 230557 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tgtggatgcaaaacaaaaca 543 |||||||||||||||||||| Sbjct: 206510 tgtggatgcaaaacaaaaca 206529
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gatgcaaaacaaaacaaaat 547 |||||||||||||||||||| Sbjct: 180749 gatgcaaaacaaaacaaaat 180730
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence Length = 211981 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ggtttagcatccattgacca 61 |||||||||||||||||||| Sbjct: 182263 ggtttagcatccattgacca 182282
>gb|AC002080.1|AC002080 Human BAC clone CTA-253B13 from 7q31-q32, complete sequence Length = 171905 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 90309 ggatgcaaaacaaaacaaaa 90290
>gb|AC008370.1|AC008370 Drosophila melanogaster, chromosome 2R, region 44B-44C, BAC clones BACR09N11 and BACR40A15, complete sequence Length = 132171 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 taaaaaccatgttaaaatat 428 |||||||||||||||||||| Sbjct: 124907 taaaaaccatgttaaaatat 124888
>emb|CT737308.2| Pan troglodytes chromosome X clone CH251-63C08 map Xq28, complete sequence Length = 166183 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tattccagtgtaaaggcatcaatt 299 |||||||||||||||| ||||||| Sbjct: 91215 tattccagtgtaaaggaatcaatt 91238
>emb|CR388148.20| Zebrafish DNA sequence from clone DKEY-25I10 in linkage group 14, complete sequence Length = 118718 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 attaaaaaccatgttaaaat 426 |||||||||||||||||||| Sbjct: 106298 attaaaaaccatgttaaaat 106317
>gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26 of 83 of the complete sequence Length = 257317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 atttatgcaaatcaaagccg 669 |||||||||||||||||||| Sbjct: 69524 atttatgcaaatcaaagccg 69543
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 taaaaaccatgttaaaatat 428 |||||||||||||||||||| Sbjct: 199666 taaaaaccatgttaaaatat 199647
>gb|AC005449.1|AC005449 Drosophila melanogaster, chromosome 2R, region 44C4-44C5, P1 clone DS06765, complete sequence Length = 85518 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 taaaaaccatgttaaaatat 428 |||||||||||||||||||| Sbjct: 7430 taaaaaccatgttaaaatat 7411
>emb|CR388363.15| Zebrafish DNA sequence from clone DKEY-254E13 in linkage group 14, complete sequence Length = 176437 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 attaaaaaccatgttaaaat 426 |||||||||||||||||||| Sbjct: 81230 attaaaaaccatgttaaaat 81211
>gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosome ul, complete sequence Length = 196838 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gcaaaacaaaacaaaatttc 550 |||||||||||||||||||| Sbjct: 71218 gcaaaacaaaacaaaatttc 71237
>dbj|AP006205.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-441L16, complete sequence Length = 157665 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tgcaaaacaaaacaaaattt 549 |||||||||||||||||||| Sbjct: 77045 tgcaaaacaaaacaaaattt 77026
>dbj|AP006204.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-112G7, complete sequence Length = 169075 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tgcaaaacaaaacaaaattt 549 |||||||||||||||||||| Sbjct: 14692 tgcaaaacaaaacaaaattt 14673
>gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome 14, complete sequence Length = 238300 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 157874 ggatgcaaaacaaaacaaaa 157855
>gb|AC159815.3| Mus musculus BAC clone RP23-324H19 from chromosome 12, complete sequence Length = 213030 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 aaaattttgtttataatgga 375 |||||||||||||||||||| Sbjct: 87366 aaaattttgtttataatgga 87347
>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence Length = 202603 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 109330 ggatgcaaaacaaaacaaaa 109311
>emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chromosome 9, complete sequence Length = 148870 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 34934 ggatgcaaaacaaaacaaaa 34953
>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete sequence Length = 169474 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aggaatgctagaatatttct 205 |||||||||||||||||||| Sbjct: 135487 aggaatgctagaatatttct 135506
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 tctaaatcgtaattattataaaga 511 |||||||||||| ||||||||||| Sbjct: 1553962 tctaaatcgtaaatattataaaga 1553985
>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence Length = 188745 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ttttcgatacattttcttgtttgt 151 ||||||| |||||||||||||||| Sbjct: 122802 ttttcgaaacattttcttgtttgt 122779
>gb|AC171241.2| Mus musculus BAC clone RP23-94E5 from chromosome 14, complete sequence Length = 244795 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ggatgcaaaacaaaacaaaa 546 |||||||||||||||||||| Sbjct: 65455 ggatgcaaaacaaaacaaaa 65436
>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence Length = 147111 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ttttcgatacattttcttgtttgt 151 ||||||| |||||||||||||||| Sbjct: 116830 ttttcgaaacattttcttgtttgt 116807
>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete sequence Length = 132773 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 atatgtgtgtatcaatatataaat 466 |||||||||||| ||||||||||| Sbjct: 118201 atatgtgtgtataaatatataaat 118224
>dbj|AP000076.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 12/19 Length = 100000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 tgcaaaacaaaacaaaattt 549 |||||||||||||||||||| Sbjct: 42886 tgcaaaacaaaacaaaattt 42905 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,411,203 Number of Sequences: 3902068 Number of extensions: 10411203 Number of successful extensions: 750589 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 748999 Number of HSP's gapped (non-prelim): 1590 length of query: 695 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 672 effective length of database: 17,143,297,704 effective search space: 11520296057088 effective search space used: 11520296057088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
