ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal13h20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 150192 tactccctccgtaaactaatataagagcatttagaacactactttagtaatttaaacact 150251 Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||||||||||||| Sbjct: 150252 cttatattagtttacagagggagta 150276 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 150216 cttatattagtttacggagggagta 150192
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| Sbjct: 34594 tactccctccgtaaactaatataagagcatttagaatactactttagtaatctaaacact 34535 Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||||||||||||| Sbjct: 34534 cttatattagtttacagagggagta 34510 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| ||||||||||| |||||| |||| ||||| |||||| Sbjct: 34510 tactccctctgtaaactaatataagagtgtttagattactaaagtagtattctaaatgct 34569 Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 34570 cttatattagtttacggagggagta 34594
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene, nuclear gene encoding plastid protein, partial cds Length = 9285 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 6382 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 6441 Query: 81 cttatattagtttacagagggagtacat 108 |||||||| ||||||||||||||||||| Sbjct: 6442 cttatattggtttacagagggagtacat 6469 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| |||||| ||||| |||| ||||||| Sbjct: 6467 gtactccctctgtaaaccaatataagagtgtttagatcactaaaatagtgttctaaacgc 6408 Query: 80 gcttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 6407 tcttatattagtttacggagggagta 6382
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons 1-3 Length = 2155 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 17 taagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaa 76 ||||||||||| | ||||| |||||||| |||||||||||||||| |||||||||||||| Sbjct: 1250 taagtactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaa 1309 Query: 77 catgcttatattagtttacagagggagta 105 | ||||||||||||||||||||||||| Sbjct: 1310 cgctcttatattagtttacagagggagta 1338 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| |||||||||||| |||||| |||| |||| |||||| Sbjct: 1338 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 1279 Query: 81 cttatattagtttacagagggagtacatatcaa 113 |||||||||||||||| |||||||| |||||| Sbjct: 1278 tttatattagtttacagggggagtacttatcaa 1246
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 |||||||||||||||||| |||||||||||| |||||| ||||| |||| |||||||| Sbjct: 6404 aagtactccctccgtaaactaatataagagcgtttagatcactaaagtagtgatctaaac 6345 Query: 78 atgcttatattagtttacagagggagtac 106 | |||||||||||||||||||||||||| Sbjct: 6344 actcttatattagtttacagagggagtac 6316 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| ||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 6316 gtactccctctgtaaactaatataagagtgtttagatcactactttagtgatctaaacgc 6375 Query: 80 gcttatattagtttacagagggagtac 106 ||||||||||||||| |||||||||| Sbjct: 6376 tcttatattagtttacggagggagtac 6402
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 19 agtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaaca 78 ||||||||||| ||||| |||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 1387 agtactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacg 1446 Query: 79 tgcttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 1447 ctcttatattagtttacggagggagta 1473 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||||||||| ||||||| |||| |||| |||||||| Sbjct: 1473 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 1414 Query: 81 cttatattagtttacagagggagtac 106 |||||||||||||||||||||||||| Sbjct: 1413 cttatattagtttacagagggagtac 1388
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||||||||||||||||||||| ||| || |||||||||||| |||||||| Sbjct: 829 gtactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgc 770 Query: 80 gcttatattagtttacagagggagt 104 ||||||||||||||| |||||||| Sbjct: 769 tcttatattagtttactgagggagt 745 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 22 actccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatgc 81 |||||||| ||||| |||||||||||| |||||| ||||| |||| ||| ||||| | Sbjct: 745 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 804 Query: 82 ttatattagtttacagagggagtac 106 |||||||| ||||| |||||||||| Sbjct: 805 ttatattaatttacggagggagtac 829 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 58 actattttagtaatctaaacatgcttatattagtttacagagggagta 105 ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 8876 actattttagtgatctaaacgatcttatatttctttacagagggagta 8829
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||| Sbjct: 2711 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 2770 Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||||||||||||| Sbjct: 2771 cttatattagtttacagagggagta 2795 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 16 ctaagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaa 75 |||| ||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| Sbjct: 2800 ctaattactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaa 2741 Query: 76 acatgcttatattagtttacagagggagta 105 || ||||||||||||||| ||||||||| Sbjct: 2740 acgctcttatattagtttacggagggagta 2711
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||||| | |||||||| |||||||||| | |||||| || Sbjct: 201072 tactccctccgtaaactaatataaaaacatttagatcactattttacttatctaagcact 201013 Query: 81 cttatattagtttacagagggagtac 106 |||||||||||||||||| ||||||| Sbjct: 201012 cttatattagtttacagatggagtac 200987 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| |||||| ||||||| Sbjct: 29739 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 29798 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 29799 tcttatattagtttacagaggga 29821 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| |||| ||||||| Sbjct: 29827 aagtattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaa 29768 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 29767 ggtcttatattagtttacagagggagtaca 29738 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 ttatattagtttacagagggagta 105 |||||||||||||| ||||||||| Sbjct: 201049 ttatattagtttacggagggagta 201072
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA, complete cds Length = 975 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||| Sbjct: 725 gtactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgc 666 Query: 80 gcttatattagtttacagagggagta 105 |||||||||||||||||||||||| Sbjct: 665 ttttatattagtttacagagggagta 640 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| |||||||| |||||||||| ||||| |||| |||||||| Sbjct: 640 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 699 Query: 81 cttatattagtttacagagggagtacat 108 ||||||||||||||| |||||||||||| Sbjct: 700 cttatattagtttacggagggagtacat 727
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene, complete cds Length = 1003 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||| Sbjct: 817 gtactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgc 758 Query: 80 gcttatattagtttacagagggagta 105 |||||||||||||||||||||||| Sbjct: 757 ttttatattagtttacagagggagta 732 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| |||||||| |||||||||| ||||| |||| |||||||| Sbjct: 732 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 791 Query: 81 cttatattagtttacagagggagtacat 108 ||||||||||||||| |||||||||||| Sbjct: 792 cttatattagtttacggagggagtacat 819
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA, complete cds Length = 1151 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||| Sbjct: 715 gtactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgc 656 Query: 80 gcttatattagtttacagagggagta 105 |||||||||||||||||||||||| Sbjct: 655 ttttatattagtttacagagggagta 630 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| |||||||| |||||||||| ||||| |||| |||||||| Sbjct: 630 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 689 Query: 81 cttatattagtttacagagggagtacat 108 ||||||||||||||| |||||||||||| Sbjct: 690 cttatattagtttacggagggagtacat 717
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 |||||||||||||||||||||||||||| |||||| |||| |||||| |||||||| Sbjct: 2811 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 2870 Query: 81 cttatattagtttacagagggagta 105 |||||| ||||||||||| |||||| Sbjct: 2871 cttatagtagtttacagacggagta 2895 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 |||||| || ||||| || ||||||||| |||||| ||||| ||||||||||||| Sbjct: 2895 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 2836 Query: 81 cttatattagtttacagagggagta 105 ||||||||| ||||| ||||||||| Sbjct: 2835 cttatattaatttacggagggagta 2811
>gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 839 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/88 (88%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatc--taaac 77 ||||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 576 gtacttcctccgtaaaccaatatacgagcatttagaacactattttagtaatctataaac 517 Query: 78 atgcttatattagtttacagagggagta 105 | ||||||||||||||| |||||||| Sbjct: 516 acttttatattagtttacaaagggagta 489
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 |||||||||||||||||||||||||||| |||||| |||| |||||| |||||||| Sbjct: 1567 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 1626 Query: 81 cttatattagtttacagagggagta 105 |||||| ||||||||||| |||||| Sbjct: 1627 cttatagtagtttacagacggagta 1651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 |||||| || ||||| || ||||||||| |||||| ||||| ||||||||||||| Sbjct: 1651 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 1592 Query: 81 cttatattagtttacagagggagta 105 ||||||||| ||||| ||||||||| Sbjct: 1591 cttatattaatttacggagggagta 1567
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||||| |||||| ||||| |||||| |||||||| |||||||||||||||| Sbjct: 7551 taatataagagcgtttagatcactactttagtgatctaaacgctcttatattagtttaca 7610 Query: 97 gagggagta 105 ||||||||| Sbjct: 7611 gagggagta 7619 Score = 60.0 bits (30), Expect = 8e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| |||||||||||| |||||| ||||| |||| |||||||| Sbjct: 7619 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 7560 Query: 81 cttatattagtttacagagggagtac 106 |||||||||||| ||| ||||||||| Sbjct: 7559 cttatattagttcaca-agggagtac 7535
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 952 taatataagaacatttagaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 952 taatataagaacatttagaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| |||||| ||||||| Sbjct: 277 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| |||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaa 248 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 249 ggtcttatattagtttacagagggagtaca 278
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds Length = 9585 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 24 tccctccgtaaattaatataagagcatttagaacacta--ttttagtaatctaaacatgc 81 ||||| ||||||||||||||| |||||||||| ||||| || ||||||| |||||| | Sbjct: 9163 tcccttcgtaaattaatataaaagcatttagatcactactttatagtaatttaaacactc 9222 Query: 82 ttatattagtttacagagggagtac 106 |||||||| ||||| |||||||||| Sbjct: 9223 ttatattaatttacggagggagtac 9247 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 19 agtactccctccgtaaattaatataagag 47 ||||||||||||||||||||||||||||| Sbjct: 9248 agtactccctccgtaaattaatataagag 9220
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||||||||| ||||| |||||||| |||||||||| || || ||||||| ||||||| Sbjct: 103753 aagtactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaac 103694 Query: 78 atgcttatattagtttacagaggga 102 ||||||||||||||| |||||| Sbjct: 103693 gctcttatattagtttacggaggga 103669 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 24 tccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatgctt 83 |||||||||||| |||||||||||| ||||||| |||| || | ||||||| || Sbjct: 103669 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 103728 Query: 84 atattagtttacagagggagtac 106 ||||||||||||| ||||||||| Sbjct: 103729 atattagtttacaaagggagtac 103751
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 10777 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 10718 Query: 97 gagggagta 105 || |||||| Sbjct: 10717 gatggagta 10709
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 62498 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 62439 Query: 97 gagggagta 105 || |||||| Sbjct: 62438 gatggagta 62430
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| ||||||||||||||||| | || || |||| ||||||||| Sbjct: 738 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 797 Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 798 cttatattagtttacggagggagta 822 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| ||||||||||| |||||| |||||||||| | || |||| Sbjct: 822 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 763 Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 762 cttatattagtttaccgagggagta 738
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 11547 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 11488 Query: 97 gagggagta 105 || |||||| Sbjct: 11487 gatggagta 11479
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| ||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 21737 tactccctctgtaaagaaatataagagcgtttagatcactactttagtgatctaaacgct 21678 Query: 81 cttatattagtttacagagggagta 105 |||||||| ||||||||||||||| Sbjct: 21677 cttatatttatttacagagggagta 21653 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| |||||| ||||||||||| |||||| ||||| |||| |||||||| Sbjct: 21653 tactccctctgtaaataaatataagagcgtttagatcactaaagtagtgatctaaacgct 21712 Query: 81 cttatattagtttacagagggagta 105 |||||||| ||||||||||||||| Sbjct: 21713 cttatatttctttacagagggagta 21737
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| Sbjct: 953 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 894 Query: 97 gagggagta 105 || |||||| Sbjct: 893 gatggagta 885
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| Sbjct: 953 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 894 Query: 97 gagggagta 105 || |||||| Sbjct: 893 gatggagta 885
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| Sbjct: 953 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 894 Query: 97 gagggagta 105 || |||||| Sbjct: 893 gatggagta 885
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 952 taatataaaaacatttagaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 952 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| ||||||||| |||||||| |||| |||||| |||||||||| Sbjct: 2259 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 2318 Query: 81 cttatattagtttacagagggagtacat 108 |||||||| | ||| |||||||||||| Sbjct: 2319 cttatatttctgtacggagggagtacat 2346
>ref|NM_196302.1| Oryza sativa (japonica cultivar-group) putative translation initiation factor 2B beta subunit (OSJNBa0068A07.14), mRNA Length = 1245 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 312 tgagtactgaagctcatgcaatctcagaactcaccacagtcaagtaaaacagatggtgat 371 |||||||||||| |||||||| | ||||||| ||| |||| || | | ||||||||||| Sbjct: 1067 tgagtactgaagttcatgcaacttgagaactcgccaaagtcgagcagatcagatggtgat 1008 Query: 372 ttaagctccttcagtaaaacctc 394 ||||| || |||||||||||||| Sbjct: 1007 ttaagttcattcagtaaaacctc 985
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 312 tgagtactgaagctcatgcaatctcagaactcaccacagtcaagtaaaacagatggtgat 371 |||||||||||| |||||||| | ||||||| ||| |||| || | | ||||||||||| Sbjct: 96829 tgagtactgaagttcatgcaacttgagaactcgccaaagtcgagcagatcagatggtgat 96888 Query: 372 ttaagctccttcagtaaaacctc 394 ||||| || |||||||||||||| Sbjct: 96889 ttaagttcattcagtaaaacctc 96911
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 69.9 bits (35), Expect = 9e-09 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| |||||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataaga-cttttagatcactactttagtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 67.9 bits (34), Expect = 3e-08 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| |||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaa 248 Query: 78 atgcttatattagtttacagagggagtaca 107 | ||||||||||||||||||||||||||| Sbjct: 249 gt-cttatattagtttacagagggagtaca 277
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 312 tgagtactgaagctcatgcaatctcagaactcaccacagtcaagtaaaacagatggtgat 371 |||||||||||| |||||||| | ||||||| ||| |||| || | | ||||||||||| Sbjct: 12576742 tgagtactgaagttcatgcaacttgagaactcgccaaagtcgagcagatcagatggtgat 12576801 Query: 372 ttaagctccttcagtaaaacctc 394 ||||| || |||||||||||||| Sbjct: 12576802 ttaagttcattcagtaaaacctc 12576824
>dbj|AK068830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B16, full insert sequence Length = 2415 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 312 tgagtactgaagctcatgcaatctcagaactcaccacagtcaagtaaaacagatggtgat 371 |||||||||||| |||||||| | ||||||| ||| |||| || | | ||||||||||| Sbjct: 1914 tgagtactgaagttcatgcaacttgagaactcgccaaagtcgagcagatcagatggtgat 1855 Query: 372 ttaagctccttcagtaaaacctc 394 ||||| || |||||||||||||| Sbjct: 1854 ttaagttcattcagtaaaacctc 1832
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 312 tgagtactgaagctcatgcaatctcagaactcaccacagtcaagtaaaacagatggtgat 371 |||||||||||| |||||||| | ||||||| ||| |||| || | | ||||||||||| Sbjct: 12584082 tgagtactgaagttcatgcaacttgagaactcgccaaagtcgagcagatcagatggtgat 12584141 Query: 372 ttaagctccttcagtaaaacctc 394 ||||| || |||||||||||||| Sbjct: 12584142 ttaagttcattcagtaaaacctc 12584164
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 67.9 bits (34), Expect = 3e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 21 tactccctccgtaaa-ttaatataagagcatttagaacactattttagtaatctaaacat 79 ||||||||||||||| |||||||||||| |||||| |||||||||| | || |||| Sbjct: 780 tactccctccgtaaacttaatataagagtgtttagatcactattttaatgatttaaatgc 721 Query: 80 gcttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 720 tcttatattagtttaccgagggagta 695 Score = 60.0 bits (30), Expect = 8e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||| ||||| ||||||||||||||||| | || || |||| ||||||||| Sbjct: 695 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 754 Query: 81 cttatatt-agtttacagagggagta 105 |||||||| ||||||| ||||||||| Sbjct: 755 cttatattaagtttacggagggagta 780
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 22 actccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatgc 81 |||||||||||||| ||||||||||| |||||| ||| |||||| | |||| ||| | Sbjct: 177661 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 177720 Query: 82 ttatattagtttacagaggga 102 ||||||||||||||| ||||| Sbjct: 177721 ttatattagtttacaaaggga 177741 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cttatattagtttacagagggagt 104 ||||||||||||||| |||||||| Sbjct: 177684 cttatattagtttacggagggagt 177661
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacacta 61 ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 614 tactccctccgtaaactaatataagagcatttagatcacta 574 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||| ||||||||| Sbjct: 590 cttatattagtttacggagggagta 614
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 16758 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 16699 Query: 97 gagggagta 105 || |||||| Sbjct: 16698 gatggagta 16690
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 905 taatataaaaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 846 Query: 97 gagggagta 105 || |||||| Sbjct: 845 gatggagta 837
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 97 gagggagta 105 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||| ||||||| ||||||||||||||| ||||||||||||||| Sbjct: 952 taatataaaaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 97 gagggagta 105 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 97 gagggagta 105 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 952 taatataaaaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 97 gagggagta 105 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 97 gagggagta 105 || |||||| Sbjct: 891 gatggagta 883
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds Length = 4768 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 1190 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 1132 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 1131 tcttatattagtttacagaggga 1109 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 1103 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 1161 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 1162 ggtcttatattagtttacagagggagtaca 1191
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial cds Length = 1437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein (rga2) gene, partial cds Length = 1436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene, partial cds Length = 1438 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial cds Length = 1435 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial cds Length = 1438 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial cds Length = 1437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene, partial cds Length = 1437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 275 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 217 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 216 tcttatattagtttacagaggga 194 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 188 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 246 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 247 ggtcttatattagtttacagagggagtaca 276
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial cds Length = 1436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 275 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 217 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 216 tcttatattagtttacagaggga 194 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 188 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 246 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 247 ggtcttatattagtttacagagggagtaca 276
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial cds Length = 1437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 218 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 217 tcttatattagtttacagaggga 195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 247 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 248 ggtcttatattagtttacagagggagtaca 277
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacat 79 |||||||||| ||||| |||||||||| | |||||| ||||| || ||| ||||||| Sbjct: 47494 gtactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaagg 47552 Query: 80 gcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 47553 tcttatattagtttacagaggga 47575 Score = 60.0 bits (30), Expect = 8e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||| |||||| ||||| |||||||||| | |||||| ||||| | ||| ||||||| Sbjct: 47581 aagtattccctctgtaaactaatataagaccttttagatcactaagt-agtgatctaaaa 47523 Query: 78 atgcttatattagtttacagagggagtaca 107 ||||||||||||||||||||||||||| Sbjct: 47522 ggtcttatattagtttacagagggagtaca 47493
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 950 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 891 Query: 97 gag 99 ||| Sbjct: 890 gag 888
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 24 tccctccgtaaattaatataagagcatttagaac 57 |||||||||||| ||||||||||||||||||||| Sbjct: 88536 tccctccgtaaactaatataagagcatttagaac 88569
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein (rga2) gene, partial cds Length = 1441 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/85 (84%), Gaps = 2/85 (2%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttagaacactatt--ttagtaatctaaac 77 |||||||||| ||||| |||||||||| | |||||| ||||| | ||||| ||||||| Sbjct: 279 gtactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaa 220 Query: 78 atgcttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 219 ggtcttatattagtttacagaggga 195 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/92 (83%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattt--tagtaatctaa 75 ||||| |||||| ||||| |||||||||| | |||||| ||||| | |||| |||||| Sbjct: 189 aagtattccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaa 248 Query: 76 acatgcttatattagtttacagagggagtaca 107 | ||||||||||||||||||||||||||| Sbjct: 249 aaggtcttatattagtttacagagggagtaca 280
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 ||||||||||||| | || |||||||||||| |||||| |||| || | |||||||| Sbjct: 1788 aagtactccctccatgaagtaatataagagcgtttagataactaaagtaatgatctaaac 1729 Query: 78 atgcttatattagtttacagagggagtac 106 | ||||||||||||||||| ||||||| Sbjct: 1728 gtttttatattagtttacagaaggagtac 1700
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||| |||| || ||||||||||||||| ||||||||||||||| Sbjct: 953 taatataacaacatttaaaacattactttagtaatctaaacgcttttatattagtttaca 894 Query: 97 gagggagta 105 || |||||| Sbjct: 893 gatggagta 885
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||| |||| || ||||||||||||||| ||||||||||||||| Sbjct: 953 taatataacaacatttaaaacattactttagtaatctaaacgcttttatattagtttaca 894 Query: 97 gagggagta 105 || |||||| Sbjct: 893 gatggagta 885
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 37 taatataagagcatttagaacactattttagtaatctaaacatgcttatattagtttaca 96 |||||||| | |||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 952 taatataaaaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 893 Query: 97 gagggagta 105 || |||||| Sbjct: 892 gatggagta 884
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 17 taagtactccctccgtaaattaatataagagcatttagaacacta 61 ||||||||||||| ||||| |||||||||||| |||||| ||||| Sbjct: 1030 taagtactccctctgtaaactaatataagagcttttagatcacta 986 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 50 tttagaacactattttagtaatctaaacatgcttatattagtttacagagggagtac 106 |||||| ||||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 971 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagtac 1027
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 |||||||| | |||| |||||||| | ||||||||| |||| || ||||||||| | Sbjct: 89631 tactcccttcttaaactaatataaaaacatttagaaaactaaaataataatctaaatact 89572 Query: 81 cttatattagtttacagagggagtaca 107 ||||||||||||||||| |||||||| Sbjct: 89571 gttatattagtttacagaaggagtaca 89545
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 20 gtactccctccgtaaattaatataagagcattta 53 ||||| |||||||||| ||||||||||||||||| Sbjct: 73049 gtacttcctccgtaaactaatataagagcattta 73082 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 cttatattagtttacagagggagtacat 108 ||||||||||||||| |||| ||||||| Sbjct: 73074 cttatattagtttacggaggaagtacat 73047
>gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate synthase 4 mRNA, partial cds Length = 2642 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 81 cttatattagtttacagagggagta 105 ||||||||||||||||||||||||| Sbjct: 1423 cttatattagtttacagagggagta 1447
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1062 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactat 62 |||||||||||| ||||| ||||||||||| |||||| |||||| Sbjct: 886 aagtactccctctgtaaagaaatataagagcgtttagatcactat 842
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 |||||||||||| |||| |||||||||| ||||||| ||||| ||| || |||||||| Sbjct: 11759 aagtactccctctataaagaaatataagagtatttagatcactactttggtgatctaaac 11700 Score = 44.1 bits (22), Expect = 0.49 Identities = 70/86 (81%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||| |||| |||||| ||| | |||| ||||||| | Sbjct: 11672 tactccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaaatact 11731 Query: 81 cttatattagtttacagagggagtac 106 |||||||| |||| ||||||||||| Sbjct: 11732 cttatatttctttatagagggagtac 11757
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 18 aagtactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaac 77 |||||||||||| |||| |||||||||| ||||||| ||||| ||| || |||||||| Sbjct: 14477 aagtactccctctataaagaaatataagagtatttagatcactactttggtgatctaaac 14418 Score = 44.1 bits (22), Expect = 0.49 Identities = 70/86 (81%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| |||||| |||| |||||| ||| | |||| ||||||| | Sbjct: 14390 tactccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaaatact 14449 Query: 81 cttatattagtttacagagggagtac 106 |||||||| |||| ||||||||||| Sbjct: 14450 cttatatttctttatagagggagtac 14475
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 38 aatataagagcatttagaacactattttagtaatctaaacatgcttatatt 88 ||||||||||| |||||| ||||| |||||| ||||| ||| |||||||| Sbjct: 4306 aatataagagcgtttagatcactactttagtgatctagacactcttatatt 4356
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||| ||| Sbjct: 4947 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 5006 Query: 81 cttatattagtttac 95 |||||||| |||||| Sbjct: 5007 cttatatttgtttac 5021
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacactattttagtaatctaaacatg 80 ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||| ||| Sbjct: 4716 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 4775 Query: 81 cttatattagtttac 95 |||||||| |||||| Sbjct: 4776 cttatatttgtttac 4790
>emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 17 taagtactccctccgtaaattaatataagag 47 |||||||| |||||||||| ||||||||||| Sbjct: 600 taagtacttcctccgtaaactaatataagag 630
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence Length = 208153 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 taaacatgcttatattagttta 94 |||||||||||||||||||||| Sbjct: 143313 taaacatgcttatattagttta 143334
>gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA sequence Length = 1768 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 cttatattagtttacagagggagtac 106 ||||||||||| |||||||||||||| Sbjct: 413 cttatattagtctacagagggagtac 438
>gb|AF458265.1| Triticum aestivum isolate Can3842 rga2 protein (rga2) gene, partial cds Length = 1392 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 cttatattagtttacagaggga 102 |||||||||||||||||||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AY106052.1| Zea mays PCO147693 mRNA sequence Length = 716 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 312 tgagtactgaagctcatgcaatctcagaactcaccacagtcaagtaaaacagatggtgat 371 ||||||||||| ||||||||||| ||||||| ||| | || || ||| ||||||| ||| Sbjct: 420 tgagtactgaaattcatgcaatctgagaactcgccaaaatcgagcaaatcagatggcgat 361 Query: 372 tt 373 || Sbjct: 360 tt 359
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 24 tccctccgtaaattaatataagagcatttagaacacta 61 ||||||||||||| |||||||||| |||||| ||||| Sbjct: 71 tccctccgtaaataaatataagagtgtttagatcacta 108
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 agtactccctccgtaaattaatataagag 47 |||||||||||||| | |||||||||||| Sbjct: 15615 agtactccctccgtcacttaatataagag 15587
>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete sequence Length = 201050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 aatgcacaaacttattctcag 161 ||||||||||||||||||||| Sbjct: 72374 aatgcacaaacttattctcag 72394
>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence Length = 193068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 aatgcacaaacttattctcag 161 ||||||||||||||||||||| Sbjct: 35845 aatgcacaaacttattctcag 35825
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 agtactccctccgtaaattaatataagag 47 |||||||||||||| | |||||||||||| Sbjct: 26367574 agtactccctccgtcacttaatataagag 26367546 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aatgcacaaacttattctca 160 |||||||||||||||||||| Sbjct: 11563281 aatgcacaaacttattctca 11563262
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence Length = 255501 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 atattagtttacagagggagt 104 ||||||||||||||||||||| Sbjct: 148409 atattagtttacagagggagt 148429
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete sequence Length = 134728 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 19 agtactccctccgtaaattaatataagag 47 |||||||||||||| | |||||||||||| Sbjct: 23066 agtactccctccgtcacttaatataagag 23094
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacacta 61 |||||||| ||||| |||||||||||| |||||| ||||| Sbjct: 47946 tactccctatgtaaaataatataagagcgtttagatcacta 47986
>gb|AC126047.3| Mus musculus BAC clone RP23-195C14 from X, complete sequence Length = 193191 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 43 aagagcatttagaacactattttagtaat 71 |||||||||||||| | |||||||||||| Sbjct: 63371 aagagcatttagaaaagtattttagtaat 63399
>gb|AC128681.6| Homo sapiens 12 BAC RP11-65M12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60492 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 tgctcaaatgcacaaacttat 155 ||||||||||||||||||||| Sbjct: 9523 tgctcaaatgcacaaacttat 9543
>tpg|BK005008.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 5 (WRKY5) gene, complete cds Length = 5379 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 taatctaaacatgcttatatt 88 ||||||||||||||||||||| Sbjct: 4479 taatctaaacatgcttatatt 4499
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 aaatgtagaagccaatgcgggcacc 459 |||||||||||||||||| |||||| Sbjct: 808627 aaatgtagaagccaatgctggcacc 808603
>dbj|AK148812.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120449I22 product:unclassifiable, full insert sequence Length = 900 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 atattagtttacagagggagt 104 ||||||||||||||||||||| Sbjct: 266 atattagtttacagagggagt 286
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 taatctaaacatgcttatatt 88 ||||||||||||||||||||| Sbjct: 2120022 taatctaaacatgcttatatt 2120002 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 cttatattagtttacagagggagtacat 108 |||||||||| |||||||||||||||| Sbjct: 19895535 cttatattaggctacagagggagtacat 19895562
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 agtactccctccgtaaattaatataagag 47 |||||||||||||| | |||||||||||| Sbjct: 26458883 agtactccctccgtcacttaatataagag 26458855 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aatgcacaaacttattctca 160 |||||||||||||||||||| Sbjct: 11560044 aatgcacaaacttattctca 11560025
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 ctccctccgtaaattaatataagagcatt 51 ||||||| |||||| |||||||||||||| Sbjct: 11110 ctccctctgtaaataaatataagagcatt 11082
>emb|BX544883.7| Mouse DNA sequence from clone RP23-302B23 on chromosome X, complete sequence Length = 133236 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 43 aagagcatttagaacactattttagtaat 71 |||||||||||||| | |||||||||||| Sbjct: 107826 aagagcatttagaaaagtattttagtaat 107854
>gb|AC137764.6| Mus musculus chromosome 3, clone RP24-512E12, complete sequence Length = 148074 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 aagtaaaacagatggtgattt 373 ||||||||||||||||||||| Sbjct: 82159 aagtaaaacagatggtgattt 82139
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 taatctaaacatgcttatatt 88 ||||||||||||||||||||| Sbjct: 86863 taatctaaacatgcttatatt 86843
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 20 gtactccctccgtaaattaatataagagcatttaga 55 |||||| ||| ||||| |||||||||||||||||| Sbjct: 117382 gtactctctctgtaaacaaatataagagcatttaga 117347
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 cttatattagtttacagagggagtacat 108 |||||||||| |||||||||||||||| Sbjct: 36699 cttatattaggctacagagggagtacat 36726
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcaagtaaaacagatggtga 370 |||||||||||||||||||| Sbjct: 24060 tcaagtaaaacagatggtga 24079
>emb|CT030567.1| Xenopus tropicalis finished cDNA, clone TNeu051d06 Length = 1802 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tgtgcattttgccaacctcc 181 |||||||||||||||||||| Sbjct: 1487 tgtgcattttgccaacctcc 1506
>emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg6 gene) Length = 2007 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tttacagagggagtacatat 110 |||||||||||||||||||| Sbjct: 1906 tttacagagggagtacatat 1887
>ref|XM_766226.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_38_8946_6349) partial mRNA Length = 2598 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 tactgatgcagtgcagaagc 421 |||||||||||||||||||| Sbjct: 2124 tactgatgcagtgcagaagc 2143
>gb|AC137819.19| Medicago truncatula clone mth2-21i24, complete sequence Length = 116989 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcgttggatcaacaacattt 284 |||||||||||||||||||| Sbjct: 17123 tcgttggatcaacaacattt 17142
>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part of a novel gene, a ribosomal protein S12 (RPS12) pseudogene, the 5' end of a novel gene, an ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (ATP5J2) psuedogene and part of a novel gene, complete sequence Length = 134566 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaattaatataagagcattt 52 |||||||||||||||||||| Sbjct: 2094 aaattaatataagagcattt 2075
>emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chromosome 9 Contains a novel gene (FLJ20808) and a ribosomal protein L23a (RPL23A) pseudogene, complete sequence Length = 150771 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tgcagaaagaacatctagtc 262 |||||||||||||||||||| Sbjct: 58637 tgcagaaagaacatctagtc 58656
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 taggcaggtaggtatcgtta 501 |||||||||||||||||||| Sbjct: 3933464 taggcaggtaggtatcgtta 3933483
>gb|AC140120.2| Homo sapiens 3 BAC RP11-106F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 74350 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ttttgccaacctcctgactctcaa 191 |||||||| ||||||||||||||| Sbjct: 15285 ttttgccatcctcctgactctcaa 15308
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aatctaaacatgcttatatt 88 |||||||||||||||||||| Sbjct: 97235 aatctaaacatgcttatatt 97254
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aatgcacaaacttattctca 160 |||||||||||||||||||| Sbjct: 113853 aatgcacaaacttattctca 113834
>gb|AC109353.3| Homo sapiens BAC clone RP11-521B22 from 4, complete sequence Length = 54527 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 catatcaactttctactctt 125 |||||||||||||||||||| Sbjct: 49410 catatcaactttctactctt 49429
>gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, complete sequence Length = 158094 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ttttgccaacctcctgactctcaa 191 ||||||||||||||||| |||||| Sbjct: 43560 ttttgccaacctcctgaatctcaa 43583
>gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, complete cds Length = 1957 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tttacagagggagtacatat 110 |||||||||||||||||||| Sbjct: 1856 tttacagagggagtacatat 1837
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aatctaaacatgcttatatt 88 |||||||||||||||||||| Sbjct: 29294189 aatctaaacatgcttatatt 29294208
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 78 atgcttatattagtttacagagggagtacata 109 ||||||||||| || |||||||||||||||| Sbjct: 11883907 atgcttatatttgtggacagagggagtacata 11883938
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tttacagagggagtacatat 110 |||||||||||||||||||| Sbjct: 23215335 tttacagagggagtacatat 23215316
>gb|AC105914.4| Homo sapiens BAC clone RP13-577H12 from 4, complete sequence Length = 91995 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 tagtaatctaaacatgcttatatt 88 |||||||||||| ||||||||||| Sbjct: 3101 tagtaatctaaatatgcttatatt 3078
>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds Length = 9755 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 21 tactccctccgtaaattaatataagagcatttagaacact 60 ||||||||||||||| |||||||||| |||||| |||| Sbjct: 7969 tactccctccgtaaagaaatataagagtgtttagatcact 8008
>gb|AC145217.2| Homo sapiens BAC clone RP11-527C10 from 2, complete sequence Length = 138179 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 taatacaaaagtaataacaa 532 |||||||||||||||||||| Sbjct: 32668 taatacaaaagtaataacaa 32687
>gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complete sequence Length = 194995 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 taatacaaaagtaataacaa 532 |||||||||||||||||||| Sbjct: 128260 taatacaaaagtaataacaa 128241
>gb|AC007749.3| Homo sapiens BAC clone RP11-574O16 from 2, complete sequence Length = 193644 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 cagagctcttggttcctaagtactccct 28 |||| |||||||||||||||| |||||| Sbjct: 40151 cagaactcttggttcctaagtcctccct 40178
>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown, complete sequence Length = 182330 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ttttgccaacctcctgactctcaa 191 ||||||||||||||||| |||||| Sbjct: 3573 ttttgccaacctcctgaatctcaa 3550
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence Length = 214838 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tttagaacactattttagta 69 |||||||||||||||||||| Sbjct: 197738 tttagaacactattttagta 197719
>gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequence Length = 94001 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 atacaaaagtaataacaaggataa 538 ||||||||| |||||||||||||| Sbjct: 29178 atacaaaagcaataacaaggataa 29201
>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218969 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 tttgcttacataatcccaaataca 238 |||||| ||||||||||||||||| Sbjct: 188351 tttgctaacataatcccaaataca 188328
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tttacagagggagtacatat 110 |||||||||||||||||||| Sbjct: 50097 tttacagagggagtacatat 50078
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 78 atgcttatattagtttacagagggagtacata 109 ||||||||||| || |||||||||||||||| Sbjct: 162192 atgcttatatttgtggacagagggagtacata 162223
>dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1212_C09 Length = 120818 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 78 atgcttatattagtttacagagggagtacata 109 ||||||||||| || |||||||||||||||| Sbjct: 33052 atgcttatatttgtggacagagggagtacata 33083
>dbj|AK105421.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B11, full insert sequence Length = 2653 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aatgcacaaacttattctca 160 |||||||||||||||||||| Sbjct: 2601 aatgcacaaacttattctca 2582
>gb|AC153898.4| Mus musculus 6 BAC RP23-55J19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 234760 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 344 accacagtcaagtaaaacagatggtgat 371 |||||| |||| |||||||||||||||| Sbjct: 76244 accacattcaaataaaacagatggtgat 76271
>emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chromosome 2, complete sequence Length = 169281 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 aatacaaaagtaataacaag 533 |||||||||||||||||||| Sbjct: 61521 aatacaaaagtaataacaag 61502
>emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on chromosome 15, complete sequence Length = 202342 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcaaagcaagctgcaccaga 207 |||||||||||||||||||| Sbjct: 143314 tcaaagcaagctgcaccaga 143295 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,348,219 Number of Sequences: 3902068 Number of extensions: 5348219 Number of successful extensions: 104030 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102861 Number of HSP's gapped (non-prelim): 1142 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
