| Clone Name | rbaal13h17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U40959.1| Caenorhabditis elegans cosmid B0310, complete sequence Length = 39130 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 taagcccttgaagatacatg 61 |||||||||||||||||||| Sbjct: 25707 taagcccttgaagatacatg 25726
>dbj|AB223280.1| Aspergillus oryzae cDNA, contig sequence: AoEST0111 Length = 732 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 taccatcactactaagccct 49 |||||||||||||||||||| Sbjct: 349 taccatcactactaagccct 368
>dbj|AB223182.1| Aspergillus oryzae cDNA, contig sequence: AoEST0013 Length = 732 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 taccatcactactaagccct 49 |||||||||||||||||||| Sbjct: 146 taccatcactactaagccct 165
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taccatcactactaagccct 49 |||||||||||||||||||| Sbjct: 1917019 taccatcactactaagccct 1917000
>gb|AC097494.3| Homo sapiens BAC clone RP11-273B19 from 4, complete sequence Length = 144135 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cagctctgctttattccaag 82 |||||||||||||||||||| Sbjct: 39528 cagctctgctttattccaag 39547
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggcagtgacggcacgatct 131 ||||||||||||||||||| Sbjct: 2230637 ggcagtgacggcacgatct 2230655
>gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, complete sequence Length = 229563 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 tattccaagaaatgaagat 92 ||||||||||||||||||| Sbjct: 81505 tattccaagaaatgaagat 81487
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 aagcccttgaagatacatg 61 ||||||||||||||||||| Sbjct: 128514 aagcccttgaagatacatg 128496
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 atggcagctctgctttatt 77 ||||||||||||||||||| Sbjct: 3834126 atggcagctctgctttatt 3834108
>gb|AC021761.8| Homo sapiens chromosome 11, clone RP11-361M6, complete sequence Length = 182789 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 ccaagaaatgaagatcatc 96 ||||||||||||||||||| Sbjct: 113362 ccaagaaatgaagatcatc 113344
>dbj|AK042365.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630085E16 product:hypothetical protein, full insert sequence Length = 2492 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 ccttgaagatacatggcag 65 ||||||||||||||||||| Sbjct: 908 ccttgaagatacatggcag 926
>gb|AC013265.7| Homo sapiens BAC clone RP11-197H3 from 2, complete sequence Length = 151721 Score = 38.2 bits (19), Expect = 6.9 Identities = 26/27 (96%), Gaps = 1/27 (3%) Strand = Plus / Plus Query: 66 ctctgctttat-tccaagaaatgaaga 91 ||||||||||| ||||||||||||||| Sbjct: 36186 ctctgctttatctccaagaaatgaaga 36212
>gb|BC084926.1| Xenopus laevis hypothetical LOC495416, mRNA (cDNA clone IMAGE:6862501), partial cds Length = 1686 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 65 gctctgctttattccaagaaatg 87 ||||||||||| ||||||||||| Sbjct: 1068 gctctgctttactccaagaaatg 1090
>emb|CT009632.14| Mouse DNA sequence from clone RP23-5G10 on chromosome 16, complete sequence Length = 208600 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 tattccaagaaatgaagat 92 ||||||||||||||||||| Sbjct: 37671 tattccaagaaatgaagat 37653
>gb|BC110927.1| Xenopus laevis cDNA clone MGC:132056 IMAGE:6857297, complete cds Length = 3706 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 65 gctctgctttattccaagaaatg 87 ||||||||||| ||||||||||| Sbjct: 1041 gctctgctttactccaagaaatg 1063
>emb|AL607039.25| Mouse DNA sequence from clone RP23-313J14 on chromosome 11, complete sequence Length = 147376 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 ccttgaagatacatggcag 65 ||||||||||||||||||| Sbjct: 33347 ccttgaagatacatggcag 33329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,105,797 Number of Sequences: 3902068 Number of extensions: 1105797 Number of successful extensions: 75712 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 75650 Number of HSP's gapped (non-prelim): 63 length of query: 145 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 124 effective length of database: 17,151,101,840 effective search space: 2126736628160 effective search space used: 2126736628160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)