ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC161876.3| Mus musculus BAC clone RP24-388H6 from chromosome... 46 0.11
2gb|AC139299.3| Mus musculus BAC clone RP23-335D20 from 1, comple... 46 0.11
3emb|AL035475.7|PFMAL4P2 Plasmodium falciparum MAL4P2 44 0.44
4gb|U43283.1| Caenorhabditis elegans cosmid T25G12, complete sequ... 44 0.44
5emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in ... 44 0.44
6emb|BX470120.5| Zebrafish DNA sequence from clone CH211-11I16 in... 44 0.44
7gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence... 44 0.44
8emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chro... 44 0.44
9gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, com... 42 1.7
10gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosom... 42 1.7
11emb|BX927336.18| Zebrafish DNA sequence from clone CH211-215P11 ... 42 1.7
12gb|AC155167.4| Mus musculus BAC clone RP23-309M3 from chromosome... 42 1.7
13emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in... 42 1.7
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
15emb|CR556714.4| Zebrafish DNA sequence from clone DKEY-29P13 in ... 42 1.7
16dbj|AP003102.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.7
17gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
18emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
19gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, com... 40 6.8
20gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosom... 40 6.8
21gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
22gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, com... 40 6.8
23gb|AC122398.2| Mus musculus BAC clone RP24-90M8 from chromosome ... 40 6.8
24gb|AC005078.1| Homo sapiens BAC clone CTA-252K19 from 7, complet... 40 6.8
25emb|CR936462.9| Zebrafish DNA sequence from clone DKEY-259H22 in... 40 6.8
26emb|AM001268.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
27emb|AM001264.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
28emb|AM001262.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
29emb|AM001261.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
30emb|AM001259.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
31emb|AM001258.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
32emb|AM003145.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
33emb|AM003139.1| Drosophila melanogaster partial Ten-a gene, intr... 40 6.8
34emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on ch... 40 6.8
35emb|AL359435.7| Human DNA sequence from clone RP11-530J24 on chr... 40 6.8
36emb|AL356291.8| Human DNA sequence from clone RP11-417K10 on chr... 40 6.8
37emb|AL158203.12| Human DNA sequence from clone RP11-93B10 on chr... 40 6.8
38gb|AC020656.33| Homo sapiens 12 BAC RP11-1143G9 (Roswell Park Ca... 40 6.8
39emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 40 6.8
40emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chrom... 40 6.8
41emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 40 6.8
42emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, c... 40 6.8
43gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome... 40 6.8
44emb|CR376829.10| Zebrafish DNA sequence from clone CH211-218I18 ... 40 6.8
45gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, com... 40 6.8
46gb|AY325007.1| Scenopinus fenestralis 16S ribosomal RNA gene, pa... 40 6.8
47gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, comp... 40 6.8
48gb|AC079789.7| Homo sapiens BAC clone RP11-475B2 from 4, complet... 40 6.8
49gb|AC009554.14| Homo sapiens, clone RP11-16B9, complete sequence 40 6.8
50gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, compl... 40 6.8
51dbj|AK134924.1| Mus musculus adult male olfactory brain cDNA, RI... 40 6.8
52gb|AC093875.1| Homo sapiens BAC clone RP11-625B21 from 4, comple... 40 6.8
53gb|AC091894.2| Homo sapiens chromosome 5 clone RP11-138J23, comp... 40 6.8
54gb|AC090568.5| Homo sapiens chromosome 8, clone RP11-69I13, comp... 40 6.8
55gb|AC154403.2| Mus musculus BAC clone RP24-239F20 from chromosom... 40 6.8
56dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
57dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
58gb|AC027559.17| Homo sapiens chromosome 15, clone RP11-89K11, co... 40 6.8
59gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromos... 40 6.8
60gb|AC093823.2| Homo sapiens BAC clone RP11-384K20 from 2, comple... 40 6.8
61gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, comp... 40 6.8
62dbj|AP006527.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
63emb|BX119954.10| Zebrafish DNA sequence from clone CH211-286O14,... 40 6.8
64emb|AJ336347.1|HSA336347 Homo sapiens genomic sequence surroundi... 40 6.8
65gb|AC140272.3| Mus musculus BAC clone RP23-332G6 from 8, complet... 40 6.8
66emb|BX649245.16| Zebrafish DNA sequence from clone CH211-213C4 i... 40 6.8
67emb|BX005479.5| Zebrafish DNA sequence from clone DKEY-209E8 in ... 40 6.8
68gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
69emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20... 40 6.8
70emb|CT025589.9| Mouse DNA sequence from clone RP24-149O16 on chr... 40 6.8
71gb|AC140456.4| Mus musculus BAC clone RP23-49D19 from 18, comple... 40 6.8
72gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, comple... 40 6.8
73emb|CR385050.10| Zebrafish DNA sequence from clone DKEY-22I16 in... 40 6.8
74gb|U39385.1|PJU39385 Paragastrozona japonica 16S ribosomal RNA g... 40 6.8
75gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 6.8
76emb|AL137228.4|CNS01DWJ Human chromosome 14 DNA sequence BAC R-3... 40 6.8
77emb|AL122126.4|CNS01DT1 Human chromosome 14 DNA sequence BAC R-3... 40 6.8

>gb|AC161876.3| Mus musculus BAC clone RP24-388H6 from chromosome 1, complete
            sequence
          Length = 174149

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 80   tatacatttttatatttttatag 102
            |||||||||||||||||||||||
Sbjct: 7047 tatacatttttatatttttatag 7025



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>gb|AC139299.3| Mus musculus BAC clone RP23-335D20 from 1, complete sequence
          Length = 204848

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 80     tatacatttttatatttttatag 102
              |||||||||||||||||||||||
Sbjct: 131926 tatacatttttatatttttatag 131948



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>emb|AL035475.7|PFMAL4P2 Plasmodium falciparum MAL4P2
          Length = 234081

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 79     ctatacatttttatatttttat 100
              ||||||||||||||||||||||
Sbjct: 121802 ctatacatttttatatttttat 121823



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>gb|U43283.1| Caenorhabditis elegans cosmid T25G12, complete sequence
          Length = 40161

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 82    tacatttttatatttttatagt 103
             ||||||||||||||||||||||
Sbjct: 36428 tacatttttatatttttatagt 36407



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>emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in linkage group 7, complete
              sequence
          Length = 210545

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 84     catttttatatttttatagtca 105
              ||||||||||||||||||||||
Sbjct: 135056 catttttatatttttatagtca 135077



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>emb|BX470120.5| Zebrafish DNA sequence from clone CH211-11I16 in linkage group 7,
              complete sequence
          Length = 164968

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 84     catttttatatttttatagtca 105
              ||||||||||||||||||||||
Sbjct: 106452 catttttatatttttatagtca 106431



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>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence
          Length = 124230

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 452  aatgcttccctaaaaccaaagc 473
            ||||||||||||||||||||||
Sbjct: 7363 aatgcttccctaaaaccaaagc 7384



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>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete
              sequence
          Length = 208030

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 452    aatgcttccctaaaaccaaagc 473
              ||||||||||||||||||||||
Sbjct: 196872 aatgcttccctaaaaccaaagc 196851



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>gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, complete sequence
          Length = 183786

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    atacatttttatatttttata 101
             |||||||||||||||||||||
Sbjct: 15333 atacatttttatatttttata 15353



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>gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosome 9, complete sequence
          Length = 217329

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     atacatttttatatttttata 101
              |||||||||||||||||||||
Sbjct: 157875 atacatttttatatttttata 157895



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>emb|BX927336.18| Zebrafish DNA sequence from clone CH211-215P11 in linkage group 5,
             complete sequence
          Length = 200686

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    tacatttttatatttttatag 102
             |||||||||||||||||||||
Sbjct: 26548 tacatttttatatttttatag 26568



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>gb|AC155167.4| Mus musculus BAC clone RP23-309M3 from chromosome 14, complete sequence
          Length = 159473

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    atatttttatagtcactgtca 111
             |||||||||||||||||||||
Sbjct: 27662 atatttttatagtcactgtca 27642



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>emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in linkage group 17,
             complete sequence
          Length = 150656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    ctatacatttttatattttta 99
             |||||||||||||||||||||
Sbjct: 30837 ctatacatttttatattttta 30817



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 69       tttttctctcctatacatttttatatttt 97
                |||||||||| |||| |||||||||||||
Sbjct: 15248171 tttttctctcatatatatttttatatttt 15248199



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>emb|CR556714.4| Zebrafish DNA sequence from clone DKEY-29P13 in linkage group 11,
             complete sequence
          Length = 124598

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    atacatttttatatttttata 101
             |||||||||||||||||||||
Sbjct: 96484 atacatttttatatttttata 96504



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>dbj|AP003102.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-386B1, complete
             sequence
          Length = 73529

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    tttttatagtcactgtcactg 114
             |||||||||||||||||||||
Sbjct: 70442 tttttatagtcactgtcactg 70422



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 69       tttttctctcctatacatttttatatttt 97
                |||||||||| |||| |||||||||||||
Sbjct: 15202454 tttttctctcatatatatttttatatttt 15202482



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>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151541

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 69    tttttctctcctatacatttttatatttt 97
             |||||||||| |||| |||||||||||||
Sbjct: 23564 tttttctctcatatatatttttatatttt 23592



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>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence
          Length = 185321

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    aattacatatttttctctcctata 83
             |||||||||||| |||||||||||
Sbjct: 57350 aattacatatttgtctctcctata 57327



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>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete
            sequence
          Length = 148213

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   acatttttatatttttatag 102
            ||||||||||||||||||||
Sbjct: 6913 acatttttatatttttatag 6894



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>gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0017K22, complete sequence
          Length = 176399

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    ttttatagtcactgtcactg 114
             ||||||||||||||||||||
Sbjct: 41092 ttttatagtcactgtcactg 41111



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>gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, complete sequence
          Length = 198670

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     tacatttttatatttttatagtca 105
              ||||||| ||||||||||||||||
Sbjct: 182069 tacatttatatatttttatagtca 182092



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>gb|AC122398.2| Mus musculus BAC clone RP24-90M8 from chromosome 18, complete sequence
          Length = 215758

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatacatttttatattttta 99
              ||||||||||||||||||||
Sbjct: 130079 tatacatttttatattttta 130098



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>gb|AC005078.1| Homo sapiens BAC clone CTA-252K19 from 7, complete sequence
          Length = 73231

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tacatttttatatttttata 101
             ||||||||||||||||||||
Sbjct: 61175 tacatttttatatttttata 61194



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>emb|CR936462.9| Zebrafish DNA sequence from clone DKEY-259H22 in linkage group 5,
             complete sequence
          Length = 40246

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cattagcatagcaaatgact 412
             ||||||||||||||||||||
Sbjct: 14395 cattagcatagcaaatgact 14414



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>emb|AM001268.1| Drosophila melanogaster partial Ten-a gene, intron, line ZBMEL131,
           fragment ID 233
          Length = 451

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 193 ctatacatttttatattttt 174



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>emb|AM001264.1| Drosophila melanogaster partial Ten-a gene, intron, line ZBMEL191,
           fragment ID 233
          Length = 451

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 193 ctatacatttttatattttt 174



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>emb|AM001262.1| Drosophila melanogaster partial Ten-a gene, intron, line ZBMEL377,
           fragment ID 233
          Length = 451

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 193 ctatacatttttatattttt 174



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>emb|AM001261.1| Drosophila melanogaster partial Ten-a gene, intron, line ZBMEL384,
           fragment ID 233
          Length = 451

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 193 ctatacatttttatattttt 174



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>emb|AM001259.1| Drosophila melanogaster partial Ten-a gene, intron, line ZBMEL82,
           fragment ID 233
          Length = 453

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 188 ctatacatttttatattttt 169



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>emb|AM001258.1| Drosophila melanogaster partial Ten-a gene, intron, line ZBMEL84,
           fragment ID 233
          Length = 462

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 193 ctatacatttttatattttt 174



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>emb|AM003145.1| Drosophila melanogaster partial Ten-a gene, intron, line MEL15,
           fragment ID 233
          Length = 397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 128 ctatacatttttatattttt 109



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>emb|AM003139.1| Drosophila melanogaster partial Ten-a gene, intron, line MEL01,
           fragment ID 233
          Length = 397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ctatacatttttatattttt 98
           ||||||||||||||||||||
Sbjct: 128 ctatacatttttatattttt 109



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>emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on chromosome 10 Contains the
             3' end of the LIPA gene for lipase A lysosomal acid
             cholesterol esterase (Wolman disease), a novel zinc finger
             pseudogene and the CH25 gene for cholesterol
             25-hydroxylase, complete sequence
          Length = 148151

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatacatttttatattttta 99
             ||||||||||||||||||||
Sbjct: 71199 tatacatttttatattttta 71180



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>emb|AL359435.7| Human DNA sequence from clone RP11-530J24 on chromosome 1, complete
            sequence
          Length = 156947

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   tttttatatttttatagtcactgt 109
            ||||||| ||||||||||||||||
Sbjct: 1454 tttttatttttttatagtcactgt 1477



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>emb|AL356291.8| Human DNA sequence from clone RP11-417K10 on chromosome 1, complete
             sequence
          Length = 35993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    tttttatatttttatagtcactgt 109
             ||||||| ||||||||||||||||
Sbjct: 35447 tttttatttttttatagtcactgt 35470



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>emb|AL158203.12| Human DNA sequence from clone RP11-93B10 on chromosome Xq12-13.1,
              complete sequence
          Length = 162680

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatacatttttatattttta 99
              ||||||||||||||||||||
Sbjct: 112636 tatacatttttatattttta 112655



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>gb|AC020656.33| Homo sapiens 12 BAC RP11-1143G9 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 123070

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   aatggcacaatcatctagaa 259
             ||||||||||||||||||||
Sbjct: 52740 aatggcacaatcatctagaa 52759



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>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
             hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    catttttatatttttatagtcact 107
             |||||||||||||||||| |||||
Sbjct: 56509 catttttatatttttatattcact 56532



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>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5
          Length = 335050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tacatttttatatttttata 101
             ||||||||||||||||||||
Sbjct: 48476 tacatttttatatttttata 48495



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>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatacatttttatattttta 99
              ||||||||||||||||||||
Sbjct: 252079 tatacatttttatattttta 252098



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>emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, complete sequence
          Length = 124330

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tacatttttatatttttata 101
             ||||||||||||||||||||
Sbjct: 38815 tacatttttatatttttata 38834



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tacatttttatatttttata 101
            ||||||||||||||||||||
Sbjct: 9078 tacatttttatatttttata 9059



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>gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome 16, complete sequence
          Length = 201384

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tacatttttatatttttata 101
              ||||||||||||||||||||
Sbjct: 121879 tacatttttatatttttata 121860



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>emb|CR376829.10| Zebrafish DNA sequence from clone CH211-218I18 in linkage group 8,
              complete sequence
          Length = 197983

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatacatttttatattttta 99
              ||||||||||||||||||||
Sbjct: 104906 tatacatttttatattttta 104887



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>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence
          Length = 163126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    tcattagcatagcaaatgactggg 415
              ||||||||| ||||||||||||||
Sbjct: 107546 tcattagcaaagcaaatgactggg 107523



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>gb|AY325007.1| Scenopinus fenestralis 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 518

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 78  cctatacatttttatatttttata 101
           |||||| |||||||||||||||||
Sbjct: 216 cctatagatttttatatttttata 239



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>gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, complete sequence
          Length = 169989

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 397    agcatagcaaatgactggggcaca 420
              |||||||||| |||||||||||||
Sbjct: 113006 agcatagcaagtgactggggcaca 112983



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>gb|AC079789.7| Homo sapiens BAC clone RP11-475B2 from 4, complete sequence
          Length = 198586

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   tatacatttttatattttta 99
            ||||||||||||||||||||
Sbjct: 8478 tatacatttttatattttta 8459



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>gb|AC009554.14| Homo sapiens, clone RP11-16B9, complete sequence
          Length = 197639

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tacatttttatatttttata 101
              ||||||||||||||||||||
Sbjct: 109290 tacatttttatatttttata 109309



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>gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, complete sequence
          Length = 91296

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tacatttttatatttttata 101
             ||||||||||||||||||||
Sbjct: 23892 tacatttttatatttttata 23873



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>dbj|AK134924.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430519A17
            product:unclassifiable, full insert sequence
          Length = 1923

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   acatttttatatttttatag 102
            ||||||||||||||||||||
Sbjct: 1825 acatttttatatttttatag 1806



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>gb|AC093875.1| Homo sapiens BAC clone RP11-625B21 from 4, complete sequence
          Length = 180418

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    tatatttttatagtcactgtcact 113
             |||||||||||| |||||||||||
Sbjct: 99922 tatatttttatattcactgtcact 99899



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>gb|AC091894.2| Homo sapiens chromosome 5 clone RP11-138J23, complete sequence
          Length = 175552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tacatttttatatttttata 101
             ||||||||||||||||||||
Sbjct: 15917 tacatttttatatttttata 15936



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>gb|AC090568.5| Homo sapiens chromosome 8, clone RP11-69I13, complete sequence
          Length = 166398

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    tcattagcatagcaaatgactggg 415
              ||||||||| ||||||||||||||
Sbjct: 163998 tcattagcaaagcaaatgactggg 164021



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>gb|AC154403.2| Mus musculus BAC clone RP24-239F20 from chromosome 16, complete sequence
          Length = 131387

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 65     catatttttctctcctatacatttttat 92
              |||||||||| ||||| |||||||||||
Sbjct: 106471 catatttttcgctcctttacatttttat 106444



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 95       ttttatagtcactgtcactg 114
                ||||||||||||||||||||
Sbjct: 15986402 ttttatagtcactgtcactg 15986421



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      catttttatatttttatagt 103
               ||||||||||||||||||||
Sbjct: 6067915 catttttatatttttatagt 6067896



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>gb|AC027559.17| Homo sapiens chromosome 15, clone RP11-89K11, complete sequence
          Length = 130473

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    tttttctctcctatacatttttat 92
             ||||||||||||||| ||||||||
Sbjct: 31731 tttttctctcctatatatttttat 31708



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>gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromosome 7, complete sequence
          Length = 207176

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 69     tttttctctcctatacatttttat 92
              ||||||||||||||| ||||||||
Sbjct: 140532 tttttctctcctatatatttttat 140555



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>gb|AC093823.2| Homo sapiens BAC clone RP11-384K20 from 2, complete sequence
          Length = 155705

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    atacatttttatatttttat 100
             ||||||||||||||||||||
Sbjct: 17300 atacatttttatatttttat 17281



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>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence
          Length = 175075

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   tgcccttgtccctttttccc 498
             ||||||||||||||||||||
Sbjct: 81651 tgcccttgtccctttttccc 81670



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>dbj|AP006527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0603H10
          Length = 137828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    catttttatatttttatagt 103
             ||||||||||||||||||||
Sbjct: 65489 catttttatatttttatagt 65470



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>emb|BX119954.10| Zebrafish DNA sequence from clone CH211-286O14, complete sequence
          Length = 155287

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 80     tatacatttttatatttttatagtcact 107
              |||| |||||| ||||||||||||||||
Sbjct: 117581 tatatatttttttatttttatagtcact 117554



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>emb|AJ336347.1|HSA336347 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-DF10RS
          Length = 731

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  atacatttttatatttttat 100
           ||||||||||||||||||||
Sbjct: 549 atacatttttatatttttat 568



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>gb|AC140272.3| Mus musculus BAC clone RP23-332G6 from 8, complete sequence
          Length = 228667

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    tacatttttatatttttatagtca 105
             ||||||| ||||||||||||||||
Sbjct: 31191 tacatttatatatttttatagtca 31214



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>emb|BX649245.16| Zebrafish DNA sequence from clone CH211-213C4 in linkage group 22,
              complete sequence
          Length = 201091

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     atacatttttatatttttat 100
              ||||||||||||||||||||
Sbjct: 175892 atacatttttatatttttat 175873



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>emb|BX005479.5| Zebrafish DNA sequence from clone DKEY-209E8 in linkage group 3, complete
              sequence
          Length = 171793

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatacatttttatattttta 99
              ||||||||||||||||||||
Sbjct: 143675 tatacatttttatattttta 143694



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 95       ttttatagtcactgtcactg 114
                ||||||||||||||||||||
Sbjct: 16079584 ttttatagtcactgtcactg 16079603



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>emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20 on chromosome Xq23 Contains
             the TEX13B gene for testis expressed sequence 13B, a novel
             pseudogene, the 3' end of the MID2 gene for midline 2
             (FXY2, RNF60, TRIM1), a novel  gene and a CpG island,
             complete sequence
          Length = 118456

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tacatttttatatttttata 101
             ||||||||||||||||||||
Sbjct: 54406 tacatttttatatttttata 54387



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>emb|CT025589.9| Mouse DNA sequence from clone RP24-149O16 on chromosome 16, complete
              sequence
          Length = 159420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 65     catatttttctctcctatacatttttat 92
              |||||||||| ||||| |||||||||||
Sbjct: 117399 catatttttcgctcctttacatttttat 117372



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>gb|AC140456.4| Mus musculus BAC clone RP23-49D19 from 18, complete sequence
          Length = 172872

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     aattacatatttttctctcctata 83
              |||||||||| |||||||||||||
Sbjct: 115147 aattacatatgtttctctcctata 115124



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>gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, complete sequence
          Length = 209942

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ctatacatttttatattttt 98
             ||||||||||||||||||||
Sbjct: 60651 ctatacatttttatattttt 60632



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>emb|CR385050.10| Zebrafish DNA sequence from clone DKEY-22I16 in linkage group 1,
            complete sequence
          Length = 145760

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   tatacatttttatattttta 99
            ||||||||||||||||||||
Sbjct: 9492 tatacatttttatattttta 9473



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>gb|U39385.1|PJU39385 Paragastrozona japonica 16S ribosomal RNA gene, mitochondrial gene
           encoding mitochondrial RNA, partial sequence
          Length = 866

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  atacatttttatatttttat 100
           ||||||||||||||||||||
Sbjct: 145 atacatttttatatttttat 126



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>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH001H24, complete sequence
          Length = 118144

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    catttttatatttttatagt 103
             ||||||||||||||||||||
Sbjct: 73198 catttttatatttttatagt 73179



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>emb|AL137228.4|CNS01DWJ Human chromosome 14 DNA sequence BAC R-369N15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160901

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatacatttttatattttta 99
             ||||||||||||||||||||
Sbjct: 88682 tatacatttttatattttta 88663



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>emb|AL122126.4|CNS01DT1 Human chromosome 14 DNA sequence BAC R-30H9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 150076

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     atttttatatttttatagtc 104
              ||||||||||||||||||||
Sbjct: 112677 atttttatatttttatagtc 112658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,435,847
Number of Sequences: 3902068
Number of extensions: 4435847
Number of successful extensions: 142128
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141664
Number of HSP's gapped (non-prelim): 464
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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