| Clone Name | rbaal13g21 |
|---|---|
| Clone Library Name | barley_pub |
>PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 138 Score = 85.9 bits (211), Expect = 3e-17 Identities = 46/65 (70%), Positives = 46/65 (70%) Frame = -3 Query: 196 MSACVMXXXXXXXXXXXXLQRSKLGGVRPSARPSLVIXXXXXXXVQTAQPYGPGGGVAFK 17 MSACVM LQRSKLGGVRPSARPSLVI VQTAQPYGPGGGVAFK Sbjct: 1 MSACVMASLALKPSSSPLLQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVAFK 60 Query: 16 EGVDA 2 EGVDA Sbjct: 61 EGVDA 65
>PSBR_ARATH (P27202) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 140 Score = 29.6 bits (65), Expect = 2.2 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = -3 Query: 196 MSACVMXXXXXXXXXXXXLQRSKLGGVRPS---ARPSLVIXXXXXXXVQTAQPYGPGGGV 26 M+A VM ++++ G+ PS ARPS I ++T +P+G G + Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGL-PSLTRARPSFKIVASGVKKIKTDKPFGINGSM 59 Query: 25 AFKEGVDA 2 ++GVDA Sbjct: 60 DLRDGVDA 67
>PHK_RHOBA (Q7UH14) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -2 Query: 119 RATIGEAVVGHSGQEGEEGPDCPTLRAWWWS 27 +A + E +V H E G D P +R W WS Sbjct: 760 KALMQEKLVEHRRYINENGQDMPEIRDWEWS 790
>C75A6_CAMME (O04773) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H)| (Cytochrome P450 75A6) Length = 523 Score = 28.1 bits (61), Expect = 6.5 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 12 PSLNATPPPGP*GWAVWTFFAFLATMTNDGLAD 110 PS + PPGP GW + L TM + LAD Sbjct: 32 PSHHHHLPPGPTGWPIIGALPLLGTMPHVSLAD 64
>L52_ADE12 (P36715) Late L1 52 kDa protein| Length = 373 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -2 Query: 119 RATIGEAVVGHSGQEGEEGPDCPTL 45 RAT A V SG +E P CPTL Sbjct: 13 RATTASAAVALSGSGEQEEPQCPTL 37
>PHK_BRAJA (Q89S87) Probable phosphoketolase (EC 4.1.2.-)| Length = 801 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = -2 Query: 143 VTTIQAWRRATIGEAVVGHSGQEGEEGPDCPTLRAWWWSGVQG 15 + T A + + + ++ HS E G D P +R W W G G Sbjct: 759 LATRAAQVKQQLRDKLLEHSRYVREHGEDMPEIRDWVWPGKPG 801
>BPL1_MOUSE (Q920N2) Biotin--protein ligase (EC 6.3.4.-) (Biotin apo-protein| ligase) [Includes: Biotin--[methylmalonyl-CoA-carboxytransferase] ligase (EC 6.3.4.9); Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase (EC 6.3.4.10) (Holocarboxylase Length = 722 Score = 27.7 bits (60), Expect = 8.5 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = -2 Query: 197 HVCLCHGIFGSETIFLSSVTTIQAWRRATIGEAVVGHSGQEGEEGPDCP 51 H+ +CH E + SV + A I + HSG EG G CP Sbjct: 102 HLSICHECLELENSTIDSVRSASA---ENIPDLPCDHSGVEGAAGELCP 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,459,508 Number of Sequences: 219361 Number of extensions: 511195 Number of successful extensions: 1512 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1511 length of database: 80,573,946 effective HSP length: 47 effective length of database: 70,263,979 effective search space used: 1686335496 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)