ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal13g12 |
|---|---|
| Clone Library Name | barley_pub |
>LGUL_HAEIN (P44638) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 38.9 bits (89), Expect = 0.011 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWL-WVGSEMIHLMELPNPDPLTGRPEHGG 412 +L+RS+ FYQD+LG+++ N + Y A+L + E +EL + + EHG Sbjct: 12 DLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIEL-TYNWGVDKYEHGT 70 Query: 411 RDRHTCIAIRDVLKLKEIFDKAEISYTLS----KSGRPAI-FARDPDGNALEFTQ 262 H I + D+ E + + T K G I F DPDG +EF + Sbjct: 71 AYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIE 125
>MCEE_MOUSE (Q9D1I5) Methylmalonyl-CoA epimerase, mitochondrial precursor (EC| 5.1.99.1) (DL-methylmalonyl-CoA racemase) Length = 178 Score = 38.5 bits (88), Expect = 0.015 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 12/113 (10%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLME-LPNPDPLTG--RPEH 418 +LE++ +FY+D+LG +V+ P + ++ +G+ + L+ L + P+TG + Sbjct: 59 DLEKASSFYRDVLGAQVSEVVPLPEHGVSVVFVNLGNTKMELLHPLGSDSPITGFLQKNK 118 Query: 417 GGRDRHTCIAIRDV---------LKLKEIFDKAEISYTLSKSGRPAIFARDPD 286 G H CI + ++ K++ + D+A+I G+P IF D Sbjct: 119 AGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKI----GAHGKPVIFLHPKD 167
>MCEE_HUMAN (Q96PE7) Methylmalonyl-CoA epimerase, mitochondrial precursor (EC| 5.1.99.1) (DL-methylmalonyl-CoA racemase) Length = 176 Score = 37.4 bits (85), Expect = 0.032 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLME-LPNPDPLTG--RPEH 418 +LE++ AFY++ILG +V+ A P + ++ +G+ + L+ L P+ G + Sbjct: 57 DLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGRDSPIAGFLQKNK 116 Query: 417 GGRDRHTCIAIRDV------LKLKEIFDKAEISYTLSKSGRPAIFARDPD 286 G H CI + ++ LK K+I +E + G+P IF D Sbjct: 117 AGGMHHICIEVDNINAAVMDLKKKKIRSLSE-EVKIGAHGKPVIFLHPKD 165
>LGUL_BRAOG (Q39366) Putative lactoylglutathione lyase (EC 4.4.1.5)| (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 282 Score = 37.0 bits (84), Expect = 0.042 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGR 409 +L+R++ FY + G+KV R + Y A+L G E + + + + G Sbjct: 27 DLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTG 86 Query: 408 DRHTCIAIRDVLKLKEIFDKAEISYT-----LSKSGRPAIFARDPDGNALEFTQV*QVRV 244 H I+ +DV K+ E + T + G F +DPDG E Q Sbjct: 87 FGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELIQ------ 140 Query: 243 RFPTRTPHRMVLVRL 199 R PT P V++R+ Sbjct: 141 RGPTPEPLCQVMLRV 155
>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin| heavy chain) Length = 3110 Score = 34.3 bits (77), Expect = 0.27 Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 7/144 (4%) Frame = -2 Query: 528 RPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCIAIRDVLKLKEIFDK 349 R D + Y+ W + + L N P TG P + D C + + E Sbjct: 156 RSLDDVEYK-PWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLE---N 211 Query: 348 AEISYTLSKSGRPAIFARDPDGNALEFTQV*QVRVRFPTRTPHRMVLVRLLYARP----- 184 EI +L +GRP+ A DP LEFT +R+RF L+ + P Sbjct: 212 GEIHISLI-NGRPS--ADDPSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDP 268 Query: 183 --CCRSYCLANKIWLGQFCLCLVH 118 R Y I +G C+C H Sbjct: 269 IVTRRYYYSVKDISVGGMCICYGH 292
>LAMA2_MOUSE (Q60675) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin| heavy chain) Length = 3106 Score = 34.3 bits (77), Expect = 0.27 Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 7/144 (4%) Frame = -2 Query: 528 RPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCIAIRDVLKLKEIFDK 349 R D + Y+ W + + L N P TG P + D C + + E Sbjct: 152 RSLDDVEYK-PWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLE---N 207 Query: 348 AEISYTLSKSGRPAIFARDPDGNALEFTQV*QVRVRFPTRTPHRMVLVRLLYARP----- 184 EI +L +GRP+ A DP LEFT +R+RF L+ + P Sbjct: 208 GEIHISLI-NGRPS--ADDPSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDP 264 Query: 183 --CCRSYCLANKIWLGQFCLCLVH 118 R Y I +G C+C H Sbjct: 265 IVTRRYYYSVKDISVGGMCICYGH 288
>LGUL_NEIMB (P0A0T3) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 138 Score = 33.9 bits (76), Expect = 0.36 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGR 409 NLE+S+ FYQ++LG+K+ + + + A++ G E + + T R + G Sbjct: 12 NLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNA 71 Query: 408 DRHTCIAIRDVLKLKEIFDKAEISYTLS----KSGRPAI-FARDPDGNALEFTQ 262 H + + D + E + + K G I F DPDG +EF Q Sbjct: 72 YGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQ 125
>LGUL_NEIMA (P0A0T2) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 138 Score = 33.9 bits (76), Expect = 0.36 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGR 409 NLE+S+ FYQ++LG+K+ + + + A++ G E + + T R + G Sbjct: 12 NLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNA 71 Query: 408 DRHTCIAIRDVLKLKEIFDKAEISYTLS----KSGRPAI-FARDPDGNALEFTQ 262 H + + D + E + + K G I F DPDG +EF Q Sbjct: 72 YGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQ 125
>YWKD_BACSU (P45871) Hypothetical protein ywkD| Length = 128 Score = 32.0 bits (71), Expect = 1.4 Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 5/109 (4%) Frame = -2 Query: 582 ERSMAFYQDILGLKV-NPARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRD 406 E+S AFY LG +V ++ Y+ GS +I L P+P RPE G Sbjct: 17 EKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPPERQTRPEAAGL- 75 Query: 405 RHTCIAIRDVLK-LKEIFDK---AEISYTLSKSGRPAIFARDPDGNALE 271 RH + + K ++E+ +K E T +G+ F DPD LE Sbjct: 76 RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPLE 124
>FBLN5_RAT (Q9WVH8) Fibulin-5 precursor (FIBL-5) (Developmental arteries and| neural crest EGF-like protein) (Dance) (Embryonic vascular EGF repeat-containing protein) (EVEC) Length = 448 Score = 31.2 bits (69), Expect = 2.3 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%) Frame = +1 Query: 160 C*TVRPATRSCVQ*SYKHHSVRCS-GWKSDSHLLHL-----CKFQRVSIRVSCKDRWTPR 321 C T P ++CV +Y RC G++ + +H C F + C ++ Sbjct: 211 CETENPCVQTCVN-TYGSFICRCDPGYELEEDGIHCSDMDECSFSEFLCQHECVNQPGSY 269 Query: 322 FAECVADFRFVKDFFQLQDISDC-YTGMTITP 414 F C + ++D QDI++C + T TP Sbjct: 270 FCSCPPGYVLLEDNRSCQDINECEHRNHTCTP 301
>LGUL_SALTY (P0A1Q2) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSE 475 +L+RS+AFY ++LG+K+ N + Y A++ G E Sbjct: 12 DLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPE 49
>LGUL_SALTI (P0A1Q3) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSE 475 +L+RS+AFY ++LG+K+ N + Y A++ G E Sbjct: 12 DLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPE 49
>CTF1B_FUSSO (P52959) Cutinase transcription factor 1 beta| Length = 882 Score = 30.0 bits (66), Expect = 5.2 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 1/120 (0%) Frame = -2 Query: 579 RSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRH 400 R A + + +++ R LP G + + + +IHL+E+ NP P E R Sbjct: 601 RDAAMHITRMATELHQCRLERFLPTTGVTVILPAMIIHLLEMKNPAPQA--RERATRGFR 658 Query: 399 TCIAIRDVLKLKEIFDKAEISY-TLSKSGRPAIFARDPDGNALEFTQV*QVRVRFPTRTP 223 C+ + + KL+E++ A+ + L + R A + + +V V F +TP Sbjct: 659 QCMRVME--KLREVYAAADYATGFLDAALRKAAIDINASVGPSTLAMMKRVPVEFSAQTP 716
>LGUL_SYNY3 (Q55595) Probable lactoylglutathione lyase (EC 4.4.1.5)| (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 131 Score = 29.6 bits (65), Expect = 6.7 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 5/114 (4%) Frame = -2 Query: 588 NLERSMAFYQDILGLKVNPARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGR 409 +L++S+ FY DILG+ + + + A++ G E + + + T + + G Sbjct: 12 DLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNG 71 Query: 408 DRHTCIAIRDVL----KLKEIFDKAEISYTLSKSGRPAI-FARDPDGNALEFTQ 262 H + + D+ K+++ K K G I F DPDG +E Q Sbjct: 72 FGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIELIQ 125
>FBLN5_MOUSE (Q9WVH9) Fibulin-5 precursor (FIBL-5) (Developmental arteries and| neural crest EGF-like protein) (Dance) Length = 448 Score = 29.3 bits (64), Expect = 8.8 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Frame = +1 Query: 160 C*TVRPATRSCVQ*SYKHHSVRCS-GWKSDSHLLHL-----CKFQRVSIRVSCKDRWTPR 321 C T P ++CV +Y RC G++ + +H C F + C ++ Sbjct: 211 CETENPCVQTCVN-TYGSFICRCDPGYELEEDGIHCSDMDECSFSEFLCQHECVNQPGSY 269 Query: 322 FAECVADFRFVKDFFQLQDISDC 390 F C + + D QDI++C Sbjct: 270 FCSCPPGYVLLDDNRSCQDINEC 292 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,076,374 Number of Sequences: 219361 Number of extensions: 1986765 Number of successful extensions: 4976 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4840 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4968 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
