ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal13f18 |
|---|---|
| Clone Library Name | barley_pub |
>ASPG4_ARATH (O65268) Putative L-asparaginase 4 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 4) [Contains: L-asparaginase 4 alpha subunit; L-asparaginase 4 beta subunit] Length = 407 Score = 200 bits (509), Expect = 3e-51 Identities = 99/187 (52%), Positives = 131/187 (70%), Gaps = 5/187 (2%) Frame = -1 Query: 749 QDCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVI 570 +D +MDTVG +CVD G++A G+SSGGIA+K+ GRVGLAA YGSGCWASSKGPFG PF++ Sbjct: 215 EDKIMDTVGVICVDNEGHIACGSSSGGIAMKISGRVGLAATYGSGCWASSKGPFGAPFLV 274 Query: 569 GCCATGAGEHLIRGFASRECCIXXXXXXXXXXXSCTKVLRSVV--QSSSEMSHDTGAGLL 396 GCC +GAGE+L+RGFA+RECC + KVLRSV+ +SS + D AG+L Sbjct: 275 GCCVSGAGEYLMRGFAARECCTSLALSQAGPASAAMKVLRSVMHQESSKIGTADKTAGIL 334 Query: 395 LVQSD--VTKRGESTVLEAAELVAAYSSPSFGIGYFGSNMSSPKVSMLRDSRAPS-GSIQ 225 +VQ+D V G L A E+ AAYSS SFG+GY+G+++ PK+S+LR R S + Sbjct: 335 VVQADASVVVPGSKPELNAVEIAAAYSSLSFGVGYYGNSIEKPKISILRTRRQMSEAGVD 394 Query: 224 HFATRVN 204 HF R++ Sbjct: 395 HFEARID 401
>TASP1_HUMAN (Q9H6P5) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 89.7 bits (221), Expect = 9e-18 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 8/178 (4%) Frame = -1 Query: 737 MDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCA 558 +DTVGAV VD GNVA+ SSGG+ALK GRVG AA+YG GCWA + G P+ Sbjct: 232 LDTVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAH-NPYSTAVST 290 Query: 557 TGAGEHLIRGFASRECCIXXXXXXXXXXXSCTKVLRSVVQSSSEMSHDTG--AGLLLVQS 384 +G GEHL+R +REC + + +++ SS ++ + G G+++++S Sbjct: 291 SGCGEHLVRTILAREC--SHALQAEDAHQALLETMQNKFISSPFLASEDGVLGGVIVLRS 348 Query: 383 ------DVTKRGESTVLEAAELVAAYSSPSFGIGYFGSNMSSPKVSMLRDSRAPSGSI 228 + + + T+L E + ++++ S +GY + K + SR P G++ Sbjct: 349 CRCSAEPDSSQNKQTLL--VEFLWSHTTESMCVGYMSAQDGKAKTHI---SRLPPGAV 401
>TASP1_MOUSE (Q8R1G1) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 88.6 bits (218), Expect = 2e-17 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 8/178 (4%) Frame = -1 Query: 737 MDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCA 558 +DTVGAV VD GNVA+ SSGG+ALK GRVG AA+YG GCWA + G P+ Sbjct: 232 LDTVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGA-QNPYSTAVST 290 Query: 557 TGAGEHLIRGFASRECCIXXXXXXXXXXXSCTKVLRSVVQSSSEMSHDTG--AGLLLVQS 384 +G GEHL+R +REC + + +++ SS ++ + G G+++++S Sbjct: 291 SGCGEHLVRTILAREC--SHALQAEDAHQALLETMQNKFISSPFLACEDGVLGGVIVLRS 348 Query: 383 ------DVTKRGESTVLEAAELVAAYSSPSFGIGYFGSNMSSPKVSMLRDSRAPSGSI 228 + + + T+L E + ++++ S +GY + K + SR P G++ Sbjct: 349 CRCSSESDSSQDKQTLL--VEFLWSHTTESMCVGYMSAQDGKAKTHI---SRLPPGAV 401
>ASGX_ECOLI (P37595) Putative L-asparaginase precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase) Length = 321 Score = 55.8 bits (133), Expect = 1e-07 Identities = 31/95 (32%), Positives = 49/95 (51%) Frame = -1 Query: 737 MDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCA 558 M TVGAV +D GN+A+ S+GG+ K+ GRVG + + G+GC+A++ + Sbjct: 177 MGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNAS-------VAVSC 229 Query: 557 TGAGEHLIRGFASRECCIXXXXXXXXXXXSCTKVL 453 TG GE IR A+ + +C +V+ Sbjct: 230 TGTGEVFIRALAAYDIAALMDYGGLSLAEACERVV 264
>ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 54.7 bits (130), Expect = 3e-07 Identities = 29/78 (37%), Positives = 44/78 (56%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 D + TVG V VD +GN+AS S+GG+ K+ GR+G + G+G +A+ + Sbjct: 188 DSQIGTVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANE--------LCA 239 Query: 566 CCATGAGEHLIRGFASRE 513 ATG GE +IR +R+ Sbjct: 240 VSATGKGEEIIRATVARD 257
>ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 53.9 bits (128), Expect = 5e-07 Identities = 29/78 (37%), Positives = 44/78 (56%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 D + TVG V VD +GN+AS S+GG+ K+ GR+G + G+G +A+ + Sbjct: 188 DSQIGTVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANE--------LCA 239 Query: 566 CCATGAGEHLIRGFASRE 513 ATG GE +IR +R+ Sbjct: 240 VSATGKGEAIIRATVARD 257
>ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase 1) [Contains: L-asparaginase 1 alpha subunit; L-asparaginase 1 beta subunit] Length = 315 Score = 53.1 bits (126), Expect = 9e-07 Identities = 30/78 (38%), Positives = 43/78 (55%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 D + TVG V VD GN+AS S+GG K+ GR+G + G+G +A+ + Sbjct: 178 DSQIGTVGCVAVDSAGNLASATSTGGYVNKMVGRIGDTPVIGAGTYAN--------HLCA 229 Query: 566 CCATGAGEHLIRGFASRE 513 ATG GE +IRG +R+ Sbjct: 230 ISATGKGEDIIRGTVARD 247
>ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 51.6 bits (122), Expect = 3e-06 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 D + TVG V VD +GN+AS S+GG+ K+ GR+G + G+G +A+ + Sbjct: 188 DSQIGTVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANE--------LCA 239 Query: 566 CCATGAGEHLIRGFASRE 513 ATG GE +I +R+ Sbjct: 240 VSATGKGEAIISATVARD 257
>ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] (Fragment) Length = 306 Score = 51.2 bits (121), Expect = 3e-06 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 D + TVG V VD GN+AS S+GG+ K+ GR+G + G+G +A+ + Sbjct: 169 DSQIGTVGCVAVDSQGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANE--------LCA 220 Query: 566 CCATGAGEHLIRGFASRE 513 ATG GE +I+ +R+ Sbjct: 221 VSATGKGEAIIQATVARD 238
>ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 2) [Contains: L-asparaginase 2 alpha subunit; L-asparaginase 2 beta subunit] Length = 325 Score = 50.1 bits (118), Expect = 8e-06 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 +TVG V VD G+ A+G S+GG+ K+ GR+G + + G+G +AS G T Sbjct: 194 ETVGCVVVDGKGHCAAGTSTGGLMNKMMGRIGDSPLIGAGTYASE--------FCGVSCT 245 Query: 554 GAGEHLIRGFASRE 513 G GE +IR +R+ Sbjct: 246 GEGEAIIRATLARD 259
>ASPG_SPOFR (O02467) N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (EC| 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosylasparagin Length = 320 Score = 50.1 bits (118), Expect = 8e-06 Identities = 27/68 (39%), Positives = 40/68 (58%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G V VD G+VA+G S+ G K+ GRVG + + G+G +A + V G AT Sbjct: 183 DTIGMVAVDSKGDVAAGTSTNGAKFKIPGRVGDSPIPGAGAYADNT-------VGGAAAT 235 Query: 554 GAGEHLIR 531 G G+ ++R Sbjct: 236 GNGDTMMR 243
>ASPG3_ARATH (Q56W64) Probable L-asparaginase 3 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 3) [Contains: L-asparaginase 3 alpha subunit; L-asparaginase 3 beta subunit] Length = 359 Score = 46.2 bits (108), Expect = 1e-04 Identities = 24/68 (35%), Positives = 36/68 (52%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+ +D G++A G S+ G K+ GRVG + GS +A + V GC AT Sbjct: 223 DTISMAVIDRMGHIAVGTSTNGATYKIPGRVGDGPIVGSSAYADDE-------VGGCGAT 275 Query: 554 GAGEHLIR 531 G G+ ++R Sbjct: 276 GDGDTMMR 283
>ASPG_MACFA (Q4R6C4) N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 346 Score = 45.4 bits (106), Expect = 2e-04 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G V + + G +A+G S+ GI K+ GRVG + + G+G +A AT Sbjct: 205 DTIGMVVIHKTGRIAAGTSTNGIKFKIHGRVGDSPVPGAGAYADDTAG-------AAAAT 257 Query: 554 GAGEHLIR 531 G G+ L+R Sbjct: 258 GEGDILMR 265
>ASPG_HUMAN (P20933) N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 346 Score = 45.4 bits (106), Expect = 2e-04 Identities = 24/68 (35%), Positives = 38/68 (55%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G V + + G++A+G S+ GI K+ GRVG + + G+G +A AT Sbjct: 205 DTIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPIPGAGAYADDTAG-------AAAAT 257 Query: 554 GAGEHLIR 531 G G+ L+R Sbjct: 258 GNGDILMR 265
>ASPG_MOUSE (Q64191) N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 346 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G V + + G+ A+G S+ GI K+ GRVG + + G+G +A AT Sbjct: 205 DTIGMVVIHKTGHTAAGTSTNGIKFKIPGRVGDSPIPGAGAYADDTAG-------AAAAT 257 Query: 554 GAGEHLIR 531 G G+ L+R Sbjct: 258 GDGDTLLR 265
>ASPG_FLAME (Q47898) N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 340 Score = 44.7 bits (104), Expect = 3e-04 Identities = 22/68 (32%), Positives = 39/68 (57%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G + +D GN++ ++ G+A K+ GRVG + + G+G + ++ + AT Sbjct: 196 DTIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNE-------IGAATAT 248 Query: 554 GAGEHLIR 531 G GE +IR Sbjct: 249 GHGEEVIR 256
>ASPG_RAT (P30919) N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosyla Length = 345 Score = 44.3 bits (103), Expect = 4e-04 Identities = 23/68 (33%), Positives = 37/68 (54%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G V + + G+ A+G S+ G+ K+ GRVG + + G+G +A AT Sbjct: 204 DTIGMVVIHKTGHTAAGTSTNGLKFKIPGRVGDSPIPGAGAYADDMAG-------AAAAT 256 Query: 554 GAGEHLIR 531 G G+ L+R Sbjct: 257 GDGDTLLR 264
>ASGX_PYRHO (O57971) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 305 Score = 42.4 bits (98), Expect = 0.002 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 + + TVGAV D + +G S+GG+ LK+ GRVG + G+G +A+ V G Sbjct: 170 EVLRSTVGAVAFDGE-EIVAGTSTGGVFLKMFGRVGDTPIIGAGTYANE--------VAG 220 Query: 566 CCATGAGEHLIR 531 TG GE IR Sbjct: 221 ASCTGLGEVAIR 232
>ASPG_CAEEL (Q21697) Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase| precursor (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain Length = 363 Score = 41.6 bits (96), Expect = 0.003 Identities = 24/68 (35%), Positives = 36/68 (52%) Frame = -1 Query: 734 DTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCAT 555 DT+G V D ++G SS G K+ GRVG + + G+G +A+ G G AT Sbjct: 211 DTIGMVVRDTENIFSAGTSSNGARFKIPGRVGDSPIPGAGAYANKFG--------GAAAT 262 Query: 554 GAGEHLIR 531 G G+ ++R Sbjct: 263 GDGDVMMR 270
>ASGX_PYRAB (Q9V262) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 305 Score = 41.6 bits (96), Expect = 0.003 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 + + TVGAV D V +G S+GG+ LK+ GRVG + G+G +A+ V G Sbjct: 170 EVLRSTVGAVAFDGE-EVVAGTSTGGVFLKMFGRVGDTPIIGAGTYANE--------VAG 220 Query: 566 CCATGAGEHLIR 531 TG GE I+ Sbjct: 221 ASCTGLGEVAIK 232
>ASGX_PYRKO (Q5JHT1) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 306 Score = 41.2 bits (95), Expect = 0.003 Identities = 27/72 (37%), Positives = 37/72 (51%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 + + TVGAV D V +G S+GG+ LK+ GRVG + G G +A+ V G Sbjct: 171 EVLRSTVGAVAFDGE-EVVAGTSTGGVFLKMFGRVGDTPIIGGGTYANE--------VAG 221 Query: 566 CCATGAGEHLIR 531 TG GE I+ Sbjct: 222 ASCTGLGEVAIK 233
>ASGX_PYRFU (Q8U4E6) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 306 Score = 41.2 bits (95), Expect = 0.003 Identities = 26/72 (36%), Positives = 38/72 (52%) Frame = -1 Query: 746 DCVMDTVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIG 567 + + TVGAV D + +G S+GG+ LK+ GRVG + G+G +A+ V G Sbjct: 171 EVLRSTVGAVAFDGE-EIVAGTSTGGVFLKMFGRVGDTPIIGAGTYANE--------VAG 221 Query: 566 CCATGAGEHLIR 531 TG GE I+ Sbjct: 222 ASCTGLGEVAIK 233
>ASGX_SYNY3 (P74383) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 329 Score = 40.8 bits (94), Expect = 0.005 Identities = 37/130 (28%), Positives = 53/130 (40%) Frame = -1 Query: 731 TVGAVCVDEYGNVASGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFVIGCCATG 552 T+G V +D G +A+G S+GG L+ GRV +AM G + T F G TG Sbjct: 173 TIGVVALDANGKIAAGTSTGGKGLERIGRVSDSAM--------PAGNYATRFA-GVSCTG 223 Query: 551 AGEHLIRGFASRECCIXXXXXXXXXXXSCTKVLRSVVQSSSEMSHDTGAGLLLVQSDVTK 372 GE +I EC + + + + + E + D GA L Q + Sbjct: 224 VGEDII-----NECLAAKVVIRVKDGQNLAQAMAKSITEALENNTDLGAIALDHQGHIAW 278 Query: 371 RGESTVLEAA 342 VL AA Sbjct: 279 GKTCPVLLAA 288
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 33.9 bits (76), Expect = 0.56 Identities = 20/61 (32%), Positives = 25/61 (40%) Frame = +1 Query: 553 PVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTAPTV 732 P QHP ++ P+ P HP P A P +S P + P P TH PT Sbjct: 158 PRGQHPPSHRRPSPPSRHG-HPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTP 216 Query: 733 S 735 S Sbjct: 217 S 217
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 33.9 bits (76), Expect = 0.56 Identities = 19/63 (30%), Positives = 27/63 (42%) Frame = +1 Query: 544 SPAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTA 723 SPAP + P + P+ P P P +P+ PS +PP AP + P + Sbjct: 105 SPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPS 164 Query: 724 PTV 732 P V Sbjct: 165 PPV 167 Score = 32.0 bits (71), Expect = 2.1 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +1 Query: 526 NPLIKCSPAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAP 687 +P + SPAP + P + P P P P + +P PS +PP AP Sbjct: 164 SPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAP 217 Score = 30.0 bits (66), Expect = 8.0 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = +1 Query: 544 SPAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTA 723 SPAP + P + P+ P P P A P+ P+ S PP AP + P S + Sbjct: 62 SPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPS-PAPPSPAPPSPAPPSPAPPSPAPPS 120 Query: 724 P 726 P Sbjct: 121 P 121
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 33.9 bits (76), Expect = 0.56 Identities = 29/120 (24%), Positives = 42/120 (35%), Gaps = 3/120 (2%) Frame = +1 Query: 376 VTSDWTSNSPAPVS*DISLLLCTTERRTLVQ---EEAGPDCDNDAEIQHSREANPLIKCS 546 +T D +S+SP L + T V E P + ++ A + Sbjct: 346 LTEDTSSDSPTSAPEKTPLPVSATAMAPSVDPSAEPTAPATTTPPDEMATQAATVAVTPE 405 Query: 547 PAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTAP 726 VA P T V + PL A P T ++ + PP T P +STH P Sbjct: 406 ETAVASPPATASVESSPLPAAAAATPGAGHTNTSSASAAKTPPTTPAPTTPPPTSTHATP 465
>POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1839 Score = 33.9 bits (76), Expect = 0.56 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Frame = +1 Query: 526 NP-LIKCSPAPVAQHPITNG-------VPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLD 681 NP L+K P HPI N +P+G L P I ANPT PS+ P D Sbjct: 672 NPSLLKQVPPEANLHPIHNPDLPSSTTLPSGALTLVPAKTPSIYANPTPPSSHPFTPLAD 731 Query: 682 APDATFPYSSTH 717 P A P H Sbjct: 732 DPTAVGPCLPFH 743
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 32.7 bits (73), Expect = 1.2 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +1 Query: 484 DCDNDAEIQHSREANPLIKCSPAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFS 663 D D+ A+ Q +A P +P+ A P T P P Q P P A P + S + Sbjct: 724 DSDSSAQ-QQMLQAQPPALQAPSGAASAPST-APPGTPQLPTQGPTPSATAVPPQGSPAT 781 Query: 664 AMPPLDAPDATFPYSSTH--TAPTV 732 + PP P + TH APT+ Sbjct: 782 SQPPNQTQSTVAPAAHTHIQQAPTL 806
>SECD_MYCTU (Q50634) Protein-export membrane protein secD| Length = 573 Score = 32.3 bits (72), Expect = 1.6 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +1 Query: 553 PVAQHPITNGVPNGPLDEAQHPEPYI-----AANPTRPSTFSAMPPLDAPDATFP 702 P A P +G P P AQ P PY + NPT P++ PP +AP AT P Sbjct: 148 PAAPPPAQSGAPASPQPGAQ-PRPYPQDPAPSPNPTSPASPPPAPPAEAP-ATDP 200
>MKL2_HUMAN (Q9ULH7) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) (Megakaryoblastic leukemia 2) Length = 1088 Score = 32.0 bits (71), Expect = 2.1 Identities = 15/43 (34%), Positives = 18/43 (41%) Frame = +1 Query: 547 PAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPP 675 PAP Q P N N L P P + P P+ S+ PP Sbjct: 808 PAPAVQQPFINKASNSVLQSRNAPLPSLQNGPNTPNKPSSPPP 850
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 32.0 bits (71), Expect = 2.1 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +1 Query: 547 PAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTAP 726 P P A HP T G+ P P++ P P T + PP P A P SS+ Sbjct: 1005 PPPAASHPTTGGLHQVPSQSPFPQHPFVPGGPP-PITPPSCPPTSTPPAG-PSSSSQPPC 1062 Query: 727 TVSIT 741 + +++ Sbjct: 1063 SAAVS 1067
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 31.6 bits (70), Expect = 2.8 Identities = 24/76 (31%), Positives = 35/76 (46%) Frame = +1 Query: 493 NDAEIQHSREANPLIKCSPAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMP 672 N A++ S P P P++ GVP PL +A +P Y T+P+ S+ P Sbjct: 1030 NTAQVASSNPYAP----PPQQRVATPLSGGVPPAPLPKASNP--YAPTATTQPNG-SSYP 1082 Query: 673 PLDAPDATFPYSSTHT 720 P T PY++ HT Sbjct: 1083 P------TGPYTNNHT 1092
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 31.2 bits (69), Expect = 3.6 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +1 Query: 544 SPAPVAQHPITNGVPNG--PLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTH 717 SP+P + HP+ P+ PL + P P+++A PS+ P +P + S H Sbjct: 416 SPSPGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPH 475
>SNPC2_RAT (Q68FX5) snRNA-activating protein complex subunit 2 (SNAPc subunit| 2) (snRNA-activating protein complex 45 kDa subunit) (SNAPc 45 kDa subunit) (Small nuclear RNA-activating complex polypeptide 2) Length = 359 Score = 30.8 bits (68), Expect = 4.7 Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 13/80 (16%) Frame = +1 Query: 511 HSREANPLIKCSPAPVAQHPITNGVPNGPLDEAQHPEPYIAANP-------------TRP 651 HS+ P C A V T P E PEP AA+P T P Sbjct: 138 HSKPGKPTKACGRALVFLS--TQDAQKDPAPEGSGPEPMTAADPTPEASVPEPKASGTNP 195 Query: 652 STFSAMPPLDAPDATFPYSS 711 T +P + PD P S Sbjct: 196 ETSGLVPEVSVPDPDAPTES 215
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.8 bits (68), Expect = 4.7 Identities = 20/64 (31%), Positives = 25/64 (39%) Frame = +1 Query: 544 SPAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTA 723 +P+P PIT L P P T P T + PP P T P S+T Sbjct: 1499 TPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTP-ITPPTSTTTLP 1557 Query: 724 PTVS 735 PT + Sbjct: 1558 PTTT 1561
>STH_HUMAN (Q8IWL8) Saitohin| Length = 128 Score = 30.8 bits (68), Expect = 4.7 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Frame = -3 Query: 654 RWPGWISCYVRLWVLGFIQRTIWYTICNWVLCNRSWRTLN*RICFP*MLYLSI------- 496 RWP I C V L +C W++ RTL+ +L LS Sbjct: 20 RWPALIECGVNLT----------QPLCEWMIQVARDRTLSLAWEVASLLTLSSSEVGLEG 69 Query: 495 IVTVWPCLLLHQSSALGGAEQQRDVS 418 + T+WP + S+ GAEQ R +S Sbjct: 70 VGTIWPSSYSSEESSRNGAEQGRQLS 95
>STH_GORGO (Q5YCU7) Saitohin| Length = 128 Score = 30.8 bits (68), Expect = 4.7 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Frame = -3 Query: 654 RWPGWISCYVRLWVLGFIQRTIWYTICNWVLCNRSWRTLN*RICFP*MLYLSI------- 496 RWP I C V L +C W++ RTL+ +L LS Sbjct: 20 RWPALIECGVNLT----------QPLCEWMIQVARDRTLSLAWEVASLLTLSSSEVGLEG 69 Query: 495 IVTVWPCLLLHQSSALGGAEQQRDVS 418 + T+WP + S+ GAEQ R +S Sbjct: 70 VGTIWPSSYSSEESSRNGAEQGRQLS 95
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 30.8 bits (68), Expect = 4.7 Identities = 19/60 (31%), Positives = 24/60 (40%) Frame = +1 Query: 547 PAPVAQHPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTAP 726 P P P+ P + P P ++A P P T A PP P T P + TAP Sbjct: 98 PPPQESKPVVPQGPGSAPGVSSAPPPAVSAPPANPPTTGA-PPGPGPTPTPPPAVPSTAP 156
>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 30.4 bits (67), Expect = 6.2 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 10/61 (16%) Frame = +1 Query: 472 EAGPDCDNDAEIQHSREANPLIKCSPAPVAQ---------HPITNGVPNGPLDEAQH-PE 621 ++ P+ D ++E + E + SP PV + HP+TNG+ PL+E+ H PE Sbjct: 140 DSEPELDEESEDEVEEEQEDR-QPSPEPVQENANSAYYDAHPVTNGIEE-PLEESSHEPE 197 Query: 622 P 624 P Sbjct: 198 P 198
>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 30.4 bits (67), Expect = 6.2 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 10/61 (16%) Frame = +1 Query: 472 EAGPDCDNDAEIQHSREANPLIKCSPAPVAQ---------HPITNGVPNGPLDEAQH-PE 621 ++ P+ D ++E + E + SP PV + HP+TNG+ PL+E+ H PE Sbjct: 140 DSEPELDEESEDEVEEEQEER-QPSPEPVQENANSGYYEAHPVTNGIEE-PLEESSHEPE 197 Query: 622 P 624 P Sbjct: 198 P 198
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 30.0 bits (66), Expect = 8.0 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = +1 Query: 523 ANPLIKCSPAPVAQHPITNGVPNGPLDEAQHPEPYIAANP-TRPSTFSAMPPLDAPDATF 699 A PL P+P A G+P GP P +A +P + P S+ P AP F Sbjct: 321 AQPLPGHLPSPHAMGQGMGGLPPGP-----EKGPTLAPSPHSLPPASSSAP---APPMRF 372 Query: 700 PYSSTHTAPTVSITQS 747 PYSS+ ++ + + S Sbjct: 373 PYSSSSSSSAAASSSS 388
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 30.0 bits (66), Expect = 8.0 Identities = 26/106 (24%), Positives = 46/106 (43%) Frame = +2 Query: 326 RQQQARQLRVQSILLSL*RQTGRATAQHRCRETSRCCSAPPSAELWCRRRQGQTVTMMLR 505 +QQQ + ++Q L T +++ + +S SAPP + R+ + Q + Sbjct: 660 QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVEQQQPPGL-- 717 Query: 506 YNIHGKQIL*LSVRQLRLHNTQLQMVYQMVLWMKPSTQSRT*QLIQ 643 N +Q L Q + H Q Q ++Q L +P Q + Q +Q Sbjct: 718 -NGQNQQTL----LQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQ 758
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 30.0 bits (66), Expect = 8.0 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +1 Query: 550 APVAQHPITNGVPNGPLDEAQHPEPY--IAANPTRPSTFSAMPPLDAPDATFPYSSTHTA 723 +PVA+ P T P EA+ PE A +PT S + P +P+A P + + TA Sbjct: 619 SPVAKSPTTKS-PTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPTAKSPEAKSPEAKSPTA 677
>LORI_HUMAN (P23490) Loricrin| Length = 316 Score = 30.0 bits (66), Expect = 8.0 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Frame = -1 Query: 722 AVCVDEYGNVASGASSGGIAL---------KVDGRVGLAAMYGSGCWASSKGPFGTPFV 573 AV YG V+SG SSGG + V G G + GSGC S G G+ +V Sbjct: 155 AVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGGGSGCGGGSSGGSGSGYV 213
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 30.0 bits (66), Expect = 8.0 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Frame = +1 Query: 541 CSPAPVAQHPITNGVPNGPLDEAQHP-EPYIAANPTRPSTFSAMPPLDAP 687 C +PV Q P + PNG LD +P P + P P PP P Sbjct: 405 CVSSPVPQMPPSPTAPNGSLDSVTYPVSPPPTSGPAAPPPPPPPPPPPPP 454
>PROP1_MOUSE (P97458) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 223 Score = 30.0 bits (66), Expect = 8.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 565 HPITNGVPNGPLDEAQHPEPYIAANPTRPSTFSAMPPLDAPDATFPYSSTHTAPT 729 +P T G P P P PY + P++PST +++ P+ +P + H APT Sbjct: 150 YPYTYGTPPPPAP--CFPHPYSHSLPSQPSTAASLALPPQPEDWYP--TLHPAPT 200
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 30.0 bits (66), Expect = 8.0 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = +1 Query: 523 ANPLIKCSPAPVAQHPITNGVPNGPLDEAQHPEPYIAANP-TRPSTFSAMPPLDAPDATF 699 A PL P+P A G+P GP P +A +P + P S+ P AP F Sbjct: 322 AQPLPGHLPSPHAMGQGMGGLPPGP-----EKGPTLAPSPHSLPPASSSAP---APPMRF 373 Query: 700 PYSSTHTAPTVSITQS 747 PYSS+ ++ + + S Sbjct: 374 PYSSSSSSSAAASSSS 389 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,366,662 Number of Sequences: 219361 Number of extensions: 2522314 Number of successful extensions: 8311 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 7563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8261 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7932903580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
