ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6l05 |
|---|---|
| Clone Library Name | barley_pub |
>TERM_ADECR (Q96682) DNA terminal protein (Bellett protein) (pTP protein)| Length = 723 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +3 Query: 96 FVFHQIAVFLLLPPSRPPRAHFLLLFPCPHLYKDMKIILNLC--YIFRQRNFVR*QQIKL 269 + +H++ + L P L L+P PHL + ++ C Y+F R++ R + ++ Sbjct: 168 YQYHRLMLMNLSPREPATEGWPLFLYPPPHLLVGYQYLVRTCNDYVFDTRSYSRLKYTEI 227 Query: 270 HI 275 H+ Sbjct: 228 HL 229
>TERM_ADECC (Q65947) DNA terminal protein (Bellett protein) (pTP protein)| Length = 608 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +3 Query: 96 FVFHQIAVFLLLPPSRPPRAHFLLLFPCPHLYKDMKIILNLC--YIFRQRNFVR*QQIKL 269 + +H++ + L P L L+P PHL + ++ C Y+F R++ R + ++ Sbjct: 53 YQYHRLMLMNLSPREPATEGWPLFLYPPPHLLVGYQYLVRTCNDYVFDTRSYSRLKYTEI 112 Query: 270 HI 275 H+ Sbjct: 113 HL 114
>TEGU_SHV21 (Q01056) Probable large tegument protein| Length = 2469 Score = 30.8 bits (68), Expect = 3.3 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Frame = +2 Query: 29 VQNKQSMCITYSMLFLHRAKHIFCFSPNSC--VPFAPX-XXXXXXXXXXXXXMSPPVQRH 199 VQ ++C + SM L + K IF F P+SC VP +P +SPP + Sbjct: 138 VQYFLAICNSKSMGILIKDKKIFIFDPHSCPLVPNSPAHVFSTSNVNDAIEYLSPP---N 194 Query: 200 ENYSKSVLYISAKKF 244 Y+ S LY K++ Sbjct: 195 VQYTGSFLYFVPKEY 209
>F262_BOVIN (P26285) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 530 Score = 30.4 bits (67), Expect = 4.3 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%) Frame = +2 Query: 284 SYFL*KA-----YLSCPFLSIYKQTPIQYICNKKT 373 +YFL K YL CP +I+K TP+ Y C +T Sbjct: 400 AYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVET 434
>F262_HUMAN (O60825) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 505 Score = 30.4 bits (67), Expect = 4.3 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%) Frame = +2 Query: 284 SYFL*KA-----YLSCPFLSIYKQTPIQYICNKKT 373 +YFL K YL CP +I+K TP+ Y C +T Sbjct: 400 AYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVET 434
>OR2T3_HUMAN (Q8NH03) Olfactory receptor 2T3| Length = 318 Score = 29.3 bits (64), Expect = 9.6 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 7/44 (15%) Frame = +1 Query: 463 CVLLISGPLMILWGLFLQVRHCL-------SHRRGLAMCMGHAV 573 C+L++ P+M++ + + H + HR+ LA C H + Sbjct: 208 CILMLLAPIMVISSSYTLILHLIHRMNSAAGHRKALATCSSHMI 251
>F262_RAT (Q9JJH5) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) (RH2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 557 Score = 29.3 bits (64), Expect = 9.6 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = +2 Query: 284 SYFL*KA-----YLSCPFLSIYKQTPIQYICNKKT 373 +YFL K YL CP I+K TP+ Y C +T Sbjct: 403 AYFLDKGADELPYLRCPLHIIFKLTPVAYGCKVET 437
>F262_MOUSE (P70265) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 519 Score = 29.3 bits (64), Expect = 9.6 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = +2 Query: 284 SYFL*KA-----YLSCPFLSIYKQTPIQYICNKKT 373 +YFL K YL CP I+K TP+ Y C +T Sbjct: 403 AYFLDKGADELPYLRCPLHIIFKLTPVAYGCKVET 437 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,243,592 Number of Sequences: 219361 Number of extensions: 1704288 Number of successful extensions: 3987 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3896 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3986 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
