ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal12p10 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 347 bits (889), Expect = 2e-95 Identities = 169/169 (100%), Positives = 169/169 (100%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG Sbjct: 296 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 355 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA Sbjct: 356 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 415 Query: 268 NQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122 NQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 416 NQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 273 bits (697), Expect = 4e-73 Identities = 129/169 (76%), Positives = 149/169 (88%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G Sbjct: 306 APTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLG 365 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 +E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDA Sbjct: 366 VEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDA 425 Query: 268 NQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122 N DA+ G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 426 NADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 272 bits (695), Expect = 7e-73 Identities = 129/171 (75%), Positives = 149/171 (87%), Gaps = 2/171 (1%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV G Sbjct: 306 APTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVG 365 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 ++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDA Sbjct: 366 VDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDA 425 Query: 268 NQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122 N DA+K G+FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 426 NNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 268 bits (685), Expect = 1e-71 Identities = 126/167 (75%), Positives = 146/167 (87%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVC GIF+TD V E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G Sbjct: 304 APTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVG 363 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 ++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDA Sbjct: 364 VDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDA 423 Query: 268 NQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 128 N+DA+ G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 424 NKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 237 bits (604), Expect = 2e-62 Identities = 111/133 (83%), Positives = 125/133 (93%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG G Sbjct: 293 APTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIG 352 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 +ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG A Sbjct: 353 VENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQA 412 Query: 268 NQDAMKTGSFYGK 230 N DAMKTG+FYGK Sbjct: 413 NDDAMKTGAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 235 bits (599), Expect = 9e-62 Identities = 110/132 (83%), Positives = 124/132 (93%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV TG Sbjct: 296 APTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTG 355 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 +ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDA Sbjct: 356 VENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDA 415 Query: 268 NQDAMKTGSFYG 233 N DAMKTGSFYG Sbjct: 416 NSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 222 bits (566), Expect = 6e-58 Identities = 103/132 (78%), Positives = 122/132 (92%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ G Sbjct: 306 APTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVG 365 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 +++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDA Sbjct: 366 VDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDA 425 Query: 268 NQDAMKTGSFYG 233 N DAM TG+FYG Sbjct: 426 NSDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 221 bits (564), Expect = 1e-57 Identities = 102/131 (77%), Positives = 122/131 (93%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV TG Sbjct: 302 APTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETG 361 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 +ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+A Sbjct: 362 VENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEA 421 Query: 268 NQDAMKTGSFY 236 N+DAMKTGSF+ Sbjct: 422 NEDAMKTGSFF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 221 bits (562), Expect = 2e-57 Identities = 106/130 (81%), Positives = 120/130 (92%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV TG Sbjct: 310 APTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTG 369 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 IE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA Sbjct: 370 IEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 429 Query: 268 NQDAMKTGSF 239 N DA+ TG+F Sbjct: 430 NADAINTGNF 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 219 bits (558), Expect = 5e-57 Identities = 105/128 (82%), Positives = 120/128 (93%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV TG Sbjct: 305 APTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTG 364 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 IE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA Sbjct: 365 IELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 424 Query: 268 NQDAMKTG 245 N DA+ TG Sbjct: 425 NADAINTG 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 219 bits (557), Expect = 7e-57 Identities = 101/130 (77%), Positives = 120/130 (92%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV G Sbjct: 306 APTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVG 365 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 ++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDA Sbjct: 366 VDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDA 425 Query: 268 NQDAMKTGSF 239 NQDA+K G+F Sbjct: 426 NQDAIKRGTF 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 215 bits (547), Expect = 1e-55 Identities = 104/131 (79%), Positives = 115/131 (87%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVC GIF+TDNV E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV TG Sbjct: 310 APTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTG 369 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 IE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDA Sbjct: 370 IEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDA 429 Query: 268 NQDAMKTGSFY 236 N DA+ GSF+ Sbjct: 430 NADAINNGSFF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 210 bits (535), Expect = 2e-54 Identities = 94/131 (71%), Positives = 120/131 (91%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ G Sbjct: 308 APTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVG 367 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 ++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+A Sbjct: 368 VDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNA 427 Query: 268 NQDAMKTGSFY 236 N+DA+K+GSF+ Sbjct: 428 NEDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 202 bits (513), Expect = 9e-52 Identities = 91/131 (69%), Positives = 118/131 (90%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIGVCKGIF+TD V ++ +V++VD PGQSIDFFGALRARVYDDEVRKW+ G Sbjct: 310 APTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVG 369 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 269 ++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+A Sbjct: 370 VDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNA 429 Query: 268 NQDAMKTGSFY 236 N+DA+K+GSF+ Sbjct: 430 NEDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 171 bits (432), Expect = 2e-42 Identities = 79/107 (73%), Positives = 93/107 (86%) Frame = -1 Query: 628 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 449 APTR+DRIG+C GIF+TD V E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW G Sbjct: 303 APTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVG 362 Query: 448 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 308 +E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 363 VERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 145 bits (365), Expect = 1e-34 Identities = 72/116 (62%), Positives = 87/116 (75%) Frame = -1 Query: 625 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 446 PTR+DRIGVC GIFQ DNV V +VDTFPGQSIDFFGALRARVYDD VR+W+ TG+ Sbjct: 280 PTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGV 339 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 278 + IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 340 DKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 112 bits (279), Expect = 1e-24 Identities = 49/110 (44%), Positives = 74/110 (67%) Frame = -1 Query: 625 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 446 P RD+++G+ GIF D +S V K+VD+FP QSIDFF ALR+R+YD+++R ++ G Sbjct: 180 PHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGY 239 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 296 EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 240 ENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 106 bits (265), Expect = 5e-23 Identities = 48/110 (43%), Positives = 72/110 (65%) Frame = -1 Query: 625 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 446 P RDD++G+ GIF D +S + ++VDTFP QSIDFF ALR+R+YD ++R ++ G Sbjct: 180 PNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGF 239 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 296 E I R+VNS + P F++P ++ L+E G++++ EQ V QL D Y Sbjct: 240 ERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = -1 Query: 547 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 368 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 3.4 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +3 Query: 195 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 371 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 372 STVI 383 I Sbjct: 302 QAFI 305
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -1 Query: 550 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 371 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 370 KLLEYGHMLVQEQDNVKRV 314 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 4.5 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +2 Query: 464 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 589 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 300 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 404 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -3 Query: 248 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 141 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +2 Query: 125 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 298 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 299 GVSKLHTLDIVLL 337 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1 Query: 466 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 359 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 29.3 bits (64), Expect = 10.0 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -1 Query: 574 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 398 NV DE +K VDTF G +D G + + + +++W S G + G + + Sbjct: 92 NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148 Query: 397 FEQPKMTVEKLLEYGHM 347 P T + GHM Sbjct: 149 ASDPSRTFKNKRMPGHM 165
>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 10.0 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 266 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 265 QDAMKTGSFYGKGAQQGTLPVPEGCT 188 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 10.0 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 266 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 265 QDAMKTGSFYGKGAQQGTLPVPEGCT 188 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 10.0 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 266 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 265 QDAMKTGSFYGKGAQQGTLPVPEGCT 188 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 10.0 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 445 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 266 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 265 QDAMKTGSFYGKGAQQGTLPVPEGCT 188 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 343 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 176 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 343 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 176 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 343 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 176 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 343 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 176 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 366 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -1 Query: 562 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 392 + +V V+T S D A+ ARV D+++ ++GS +E ++ V+ +G + ++ Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280
>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA| Length = 616 Score = 29.3 bits (64), Expect = 10.0 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Frame = +2 Query: 428 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 580 P+ N +D ADP LA LI P +V+G + GVDDL DR+V +I VG Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199 Query: 581 LEDTLA 598 D A Sbjct: 200 AADAPA 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,117,434 Number of Sequences: 219361 Number of extensions: 1712512 Number of successful extensions: 5125 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5122 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
