ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal12o07 |
|---|---|
| Clone Library Name | barley_pub |
>VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| Length = 182 Score = 178 bits (451), Expect = 1e-44 Identities = 78/128 (60%), Positives = 106/128 (82%) Frame = -2 Query: 545 DLHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTG 366 D+HI RG++DE+ YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+LQRQ DVDIL++G Sbjct: 55 DVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISG 114 Query: 365 HTHQFKAYKHEGGVVINPGSATGAHSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKV 186 HTH+F+A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV Sbjct: 115 HTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKV 174 Query: 185 DKIDFKKT 162 ++I++KK+ Sbjct: 175 ERIEYKKS 182
>VPS29_HUMAN (Q9UBQ0) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| (hVPS29) (PEP11) Length = 182 Score = 177 bits (450), Expect = 1e-44 Identities = 78/127 (61%), Positives = 105/127 (82%) Frame = -2 Query: 545 DLHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTG 366 D+HI RG++DE+ YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+LQRQ DVDIL++G Sbjct: 55 DVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISG 114 Query: 365 HTHQFKAYKHEGGVVINPGSATGAHSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKV 186 HTH+F+A++HE INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV Sbjct: 115 HTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKV 174 Query: 185 DKIDFKK 165 ++I++KK Sbjct: 175 ERIEYKK 181
>PEP11_YEAST (P38759) Protein PEP11| Length = 282 Score = 70.9 bits (172), Expect = 2e-12 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 21/116 (18%) Frame = -2 Query: 545 DLHITRGEYDEDARYPETKT------------------VTIGQFKLGLCHGHQVVPWGDL 420 ++ I RGE+D + P TK + G K+G C G+ VVP D Sbjct: 57 NITIVRGEFD-NGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDP 115 Query: 419 DSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSS---ITYDVNPS 261 SL L RQLDVDIL+ G TH +AY EG +NPGS TGA ++ I +DV S Sbjct: 116 LSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171 Score = 42.4 bits (98), Expect = 9e-04 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = -2 Query: 290 SSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 165 S I +PSF L+DI G +Y+Y ++GEVKVDK+ ++K Sbjct: 240 SDINGSNSPSFCLLDIQGNTCTLYIYLYVNGEVKVDKVVYEK 281
>Y1774_METTH (O27802) Putative metallophosphoesterase MTH1774 (EC 3.1.4.-)| Length = 172 Score = 57.4 bits (137), Expect = 3e-08 Identities = 33/88 (37%), Positives = 50/88 (56%) Frame = -2 Query: 500 PETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVV 321 P ++ I F++GL HG +V P GD L L +L D+L++GHTHQ + E V+ Sbjct: 69 PRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELEDMVL 127 Query: 320 INPGSATGAHSSITYDVNPSFVLMDIDG 237 +NPGS T + +PS +++ IDG Sbjct: 128 LNPGSPT-----VPRLTDPSVMVLRIDG 150
>Y623_METJA (Q58040) Putative metallophosphoesterase MJ0623 (EC 3.1.4.-)| Length = 192 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/67 (35%), Positives = 38/67 (56%) Frame = -2 Query: 500 PETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVV 321 P + + I K+G+ HG V P GD L +L +++ VD+L++GHTH ++ Sbjct: 99 PRKEILEINDIKIGVIHGDVVYPRGDRLKLRLLGKEMGVDVLISGHTHTPFIDDCRDILL 158 Query: 320 INPGSAT 300 +NPGS T Sbjct: 159 LNPGSPT 165
>Y207_MYCGE (P47449) Putative metallophosphoesterase MG207 (EC 3.1.4.-)| Length = 163 Score = 34.7 bits (78), Expect = 0.18 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 11/88 (12%) Frame = -2 Query: 497 ETKTVTIGQFKLGLCHGHQ-----VVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHE 333 E + +GQ L HGHQ + W L L + +Q D+L+ GH+H K Sbjct: 60 EIEIFQLGQINFVLMHGHQAPRDNLKKWYQL--LVLKAQQYPCDVLIFGHSHIEYTNKIN 117 Query: 332 GGVVINPGS------ATGAHSSITYDVN 267 +INPGS T S T+ VN Sbjct: 118 MIQLINPGSLQLPRNQTNTPSYCTFIVN 145
>YSNB_BACSU (P94559) Putative metallophosphoesterase ysnB (EC 3.1.4.-)| Length = 171 Score = 33.9 bits (76), Expect = 0.31 Identities = 20/77 (25%), Positives = 36/77 (46%) Frame = -2 Query: 536 ITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTH 357 + +G D + + +T G K+ + HGH L ++ +L D++ GH+H Sbjct: 52 VVKGNCDFAGDFKDELLLTAGSRKILVTHGHLHGIKQTLLNVYYRAEELGADVICFGHSH 111 Query: 356 QFKAYKHEGGVVINPGS 306 + G ++INPGS Sbjct: 112 IAGSEVLRGKLMINPGS 128
>YFCE_ECOLI (P67095) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.3 bits (72), Expect = 0.89 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Frame = -2 Query: 485 VTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 306 V + + +L L HGH P ++L L + D+LV GHTH A + NPGS Sbjct: 94 VLLEKQRLFLTHGHLFGP----ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGS 146 Query: 305 ATGAHSSITYDVNP-SFVLMDIDGLRVVVYVYELIDGEVKVD 183 SI NP S+ ++D D L V+ + I +V ++ Sbjct: 147 V-----SIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVAIN 183
>YFCE_ECOL6 (P67096) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.3 bits (72), Expect = 0.89 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Frame = -2 Query: 485 VTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 306 V + + +L L HGH P ++L L + D+LV GHTH A + NPGS Sbjct: 94 VLLEKQRLFLTHGHLFGP----ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGS 146 Query: 305 ATGAHSSITYDVNP-SFVLMDIDGLRVVVYVYELIDGEVKVD 183 SI NP S+ ++D D L V+ + I +V ++ Sbjct: 147 V-----SIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVAIN 183
>YFCE_ECO57 (P67097) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.3 bits (72), Expect = 0.89 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Frame = -2 Query: 485 VTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 306 V + + +L L HGH P ++L L + D+LV GHTH A + NPGS Sbjct: 94 VLLEKQRLFLTHGHLFGP----ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGS 146 Query: 305 ATGAHSSITYDVNP-SFVLMDIDGLRVVVYVYELIDGEVKVD 183 SI NP S+ ++D D L V+ + I +V ++ Sbjct: 147 V-----SIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVAIN 183
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -3 Query: 382 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMASV 230 TSSSP T SS S+ +SST A + T+ S TST S S+ Sbjct: 208 TSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSI 258
>PCP_MYCTU (P0A5R4) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -1 Query: 486 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 322 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 321 HQPWLSHGRPQQHHI 277 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>PCP_MYCBO (P0A5R5) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -1 Query: 486 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 322 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 321 HQPWLSHGRPQQHHI 277 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 313 P AR P G S G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQG-SRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAP 398
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -1 Query: 453 PWPSGCS--MGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 328 P P G S G PGLP + G GHP P +G + G Sbjct: 1130 PGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDG 1173
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 31.2 bits (69), Expect = 2.0 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = -3 Query: 382 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMAS 233 ++SS T SS TST SSST P + + +S +TST +S + T +S Sbjct: 204 STSSSSTSTSSSSTSTS--SSSTSTSPSSTSTSSSLTSTSSSSTSTSQSS 251
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -1 Query: 444 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 265 SG S RP AG GH H G GG R HG P H P Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 865 Query: 264 ELRAHGH*WPP 232 R H H PP Sbjct: 866 GHRGHDHRGPP 876
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -1 Query: 444 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 265 SG S RP AG GH H G GG R HG P H P Sbjct: 809 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 866 Query: 264 ELRAHGH*WPP 232 R H H PP Sbjct: 867 GHRGHDHRGPP 877
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -1 Query: 444 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 265 SG S RP AG GH H G GG R HG P H P Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 865 Query: 264 ELRAHGH*WPP 232 R H H PP Sbjct: 866 GHRGHDHRGPP 876
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Frame = -1 Query: 441 GCSMGRPGLPSDASAAAGCGHPRHRAHPSVQG-LQARGGCRHQPWLSHGRPQQHHI*RQP 265 G MG P + G HR H G + A GG R HG P H P Sbjct: 791 GGGMGGGHRPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGGPHGHRPHDVP 850 Query: 264 ELRAHGH*WPP 232 R H H PP Sbjct: 851 GHRGHDHRGPP 861
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = -1 Query: 423 PGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQPELRAHGH 244 PG + AS G HR++ QG + H P H QQHH +Q L+ H Sbjct: 3874 PGTTAAASVGGGNLSKFHRSYSMGQGWASLAQHNHPP--PHHPQQQHHQQQQMNLQLQQH 3931 Query: 243 *WPP 232 PP Sbjct: 3932 QAPP 3935
>P936_METJA (Q58346) Phosphodiesterase MJ0936 (EC 3.1.4.-)| Length = 166 Score = 30.8 bits (68), Expect = 2.6 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -2 Query: 488 TVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPG 309 +V I K + HGH L M + D+++ GHTH+ + + +VINPG Sbjct: 85 SVEIDDLKFFITHGHHQ------SVLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPG 138 Query: 308 SATG 297 G Sbjct: 139 ECCG 142
>AKR1_USTMA (Q4P6L3) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 844 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 376 SSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSW 248 ++PGTP+SS ++T+ +S ST+ P P +S SW Sbjct: 2 AAPGTPLSS--SATQAISVSTVDAPSDPLLSSQSAQLDGHSSW 42
>MDFI_MOUSE (P70331) MyoD family inhibitor (Myogenic repressor I-mf)| Length = 251 Score = 30.4 bits (67), Expect = 3.4 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Frame = -1 Query: 447 PSGCS---MGRPGLPSDASAAAGCGHPRHR---AHPSV---QGLQARGGCRHQPWLSHGR 295 P+G S + PG A A G HR HPS+ G ++RG R + Sbjct: 100 PNGSSHDHLSEPGSAGHAGNGALGGSKAHRKLQTHPSLGSQAGRKSRGSARSASQV---- 155 Query: 294 PQQHHI*RQPELRAHGH*WPPCCCLR 217 P Q + P +R H P CCLR Sbjct: 156 PLQAQEGKAPAVRIHRQTASPTCCLR 181
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -1 Query: 414 PSDASAAAGCGHPRHRAHPSVQGLQARGG-CRHQPWLSHGR 295 PS + + HP H AHPS L + GG H W HGR Sbjct: 55 PSHGAHPSHGAHPSHGAHPSHGALPSHGGQVPHSGW-GHGR 94 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = -1 Query: 429 GRPGL-PSDASAAAGCGHPRHRAHPSVQGLQARGG-CRHQPWLSHGRPQQH 283 GRPG PS + A HP H AHPS + G H SHG H Sbjct: 37 GRPGAHPSHGAHPAHGAHPSHGAHPSHGAHPSHGAHPSHGALPSHGGQVPH 87
>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF| Length = 365 Score = 30.4 bits (67), Expect = 3.4 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 93 RKNKNKQDRISVMWKAPSAMHRGGLLEVDLVNLHL 197 R ++ QDR + W+AP A+ R GL + D + L L Sbjct: 43 RSHRCSQDRDLIQWEAPRALLRAGLDDGDQLELEL 77
>HXD13_HUMAN (P35453) Homeobox protein Hox-D13 (Hox-4I)| Length = 335 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 310 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 176 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 235 Query: 309 LSHGRPQQHH 280 + +PQ H Sbjct: 236 CTKDQPQGSH 245
>HXD13_CARPS (Q5EU41) Homeobox protein Hox-D13| Length = 333 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 310 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 174 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 233 Query: 309 LSHGRPQQHH 280 + +PQ H Sbjct: 234 CAKDQPQGSH 243
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 382 TSSSPGTPI-SSRPTSTRGVSSSTLA-QPRAPTAASHMTSTRASCS 251 TSSSP T +S P+ST SSST A AP+ AS TS S S Sbjct: 60 TSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTS 105 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3 Query: 382 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWT 245 T+++ TP ++ PTST ++T A PT AS T T + + T Sbjct: 150 TATATSTPTTTTPTST----TTTTATTTVPTTASTTTDTTTAATTT 191
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 4.4 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = -3 Query: 472 SSS*GYAMAIRLFHGATWTP*RCF---SGSWMWTSSSPGTPISSR--PTSTRGVSSSTLA 308 SSS G A+ ++ T TP SGS + SS PGT ++R T+T V++ ++A Sbjct: 4547 SSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMA 4606 Query: 307 QPRAPTAASHMTSTRASCSWTLMAS 233 P + T S + + + T+ A+ Sbjct: 4607 TPSSSTQTSGTPPSLTTTATTITAT 4631
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -1 Query: 429 GRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 328 G+PG+P G G P P + GL+ GG Sbjct: 1346 GQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGG 1379
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 382 TSSSPGTPI-SSRPTSTRGVSSSTLA-QPRAPTAASHMTSTRASCS 251 TSSSP T +S P+ST SSST A AP+ AS TS S S Sbjct: 60 TSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTS 105 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3 Query: 382 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWT 245 T+++ TP ++ PTST ++T A PT AS T T + + T Sbjct: 150 TATATSTPTTTTPTST----TTTTATTTVPTTASTTTDTTTAATTT 191
>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)| Length = 339 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 310 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 180 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 239 Query: 309 LSHGRPQQHH 280 + +PQ H Sbjct: 240 CAKDQPQGSH 249
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 313 P AR P G G PG P A AA G+P P +G G P Sbjct: 353 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 405
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 313 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -1 Query: 474 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 313 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -3 Query: 382 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRAS 257 TSS+P TP S+ TST SST + T+A T+ + S Sbjct: 673 TSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQES 714
>Y126_MYCPN (P75349) Putative metallophosphoesterase MG207 homolog (EC 3.1.4.-)| (C09_orf159) Length = 159 Score = 29.6 bits (65), Expect = 5.8 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -2 Query: 458 LCHGHQVVPWGDLDS----LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 306 L HGHQ P DL L + D+L+ GH+H +G VINPGS Sbjct: 73 LMHGHQA-PRHDLKQWYKMLVDQAKSYLCDVLIVGHSHIEHYETIDGIQVINPGS 126
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 5.8 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = -3 Query: 442 RLFHGATWTP*RCFSGSWMWTSSSPGTPISSRPTSTR---GVSSSTLAQPRAPTAA 284 RL G + P S S +SS+P P PTST+ SS++LA+P+AP AA Sbjct: 477 RLPSGPSLPPSSSSSSSSSSSSSAPQRP--GGPTSTQVNASSSSNSLAEPQAPQAA 530
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -1 Query: 456 MPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 313 MP P G S G G+ ++ GH R P QGL + G +P Sbjct: 963 MPGPRG-SPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEP 1009
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = -3 Query: 379 SSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMAS 233 +++P T + PT+ G + +T A P TAAS +T A+ + + A+ Sbjct: 88 ATAPTTAAAGAPTTATGKAPATAAAPVPTTAASKAPTTAAAATHSTAAA 136
>PPN1_DEBHA (Q6BKG0) Endopolyphosphatase (EC 3.6.1.10)| Length = 713 Score = 29.3 bits (64), Expect = 7.6 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 21 WFSISSRRVQLVRETKQKSSGRWGRKNKNKQDRI 122 W S++ R + V+E K KS+ + +K KNK R+ Sbjct: 629 WISLARRLGKPVKEKKNKSNKKSKKKKKNKDKRL 662
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -1 Query: 456 MPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 313 MP P G S G G+ ++ GH R P QGL + G +P Sbjct: 963 MPGPRG-SPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEP 1009
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 6/57 (10%) Frame = -1 Query: 477 WPVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGL------QARGGC 325 +P Q P GC G PG P + + GH P G+ GGC Sbjct: 79 YPEQCNCGPKSEGCPAGPPGPPGEGGQSGEPGHDGDDGKPGAPGVIVAITHDIPGGC 135
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = -3 Query: 370 PGTPISSRPTSTRGVSSSTLAQPRA--PTAASHMTSTR 263 P P+ PT + GVSSST A P A P+A+S STR Sbjct: 1951 PKPPLPPLPTGS-GVSSSTAAAPGATSPSASSASASTR 1987
>DNAJ_STRT2 (Q5M6D0) Chaperone protein dnaJ| Length = 377 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 500 PETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDI 378 P T VT G+ CHGH V+ L M++RQ+ D+ Sbjct: 156 PGTSPVTCGR-----CHGHGVINVDTQTPLGMMRRQVTCDV 191
>DNAJ_STRT1 (Q5M1T7) Chaperone protein dnaJ| Length = 377 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 500 PETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDI 378 P T VT G+ CHGH V+ L M++RQ+ D+ Sbjct: 156 PGTSPVTCGR-----CHGHGVINVDTQTPLGMMRRQVTCDV 191
>CG019_HUMAN (Q9H9Y3) Protein C7orf19| Length = 180 Score = 28.9 bits (63), Expect = 9.9 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Frame = -1 Query: 468 QARAMPWPSGCSMGRPGLPSDASAAAGCGHPR-----HRAHPSVQGLQARGGCRHQPWLS 304 +AR +PWP G G A AG H + HP+V+G G Q W S Sbjct: 12 KARLVPWPRGFL----GRGHGEEAPAGPAHQSWARRGSKQHPAVRGSLRPGMRGWQTWES 67 Query: 303 HGR 295 GR Sbjct: 68 QGR 70
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Frame = -1 Query: 465 ARAMPWPSGC--------SMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 328 A+ +P P G +G+PGLP A GHP P +G Q G Sbjct: 728 AQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Frame = -1 Query: 465 ARAMPWPSGC--------SMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 328 A+ +P P G +G+PGLP A GHP P +G Q G Sbjct: 728 AQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Frame = -1 Query: 465 ARAMPWPSGC--------SMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 328 A+ +P P G +G+PGLP A GHP P +G Q G Sbjct: 730 AQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Frame = -1 Query: 465 ARAMPWPSGC--------SMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 328 A+ +P P G +G+PGLP A GHP P +G Q G Sbjct: 730 AQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783
>RD23B_HUMAN (P54727) UV excision repair protein RAD23 homolog B (hHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 409 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = -3 Query: 382 TSSSPGTPISSRPTSTRGVSSS---TLAQPRAPTAASHMTSTRAS 257 ++ +P T S P ST V+SS T+AQ P A TST AS Sbjct: 81 STPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPAS 125
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 888 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Frame = -1 Query: 372 HRAHPSVQG-LQARGGCRHQPWLSHGRPQQHHI*RQPELRAHGH*WPP 232 HR+H G + GG R HG P H P R H H PP Sbjct: 779 HRSHDGPGGNMGGSGGHRSHEGPGHGGPHGHRPHDVPSHRGHDHRGPP 826 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,331,485 Number of Sequences: 219361 Number of extensions: 1869487 Number of successful extensions: 7030 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 6047 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6961 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
