ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13c21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185071.1| Oryza sativa (japonica cultivar-group), mRNA 525 e-146
2gb|BT018892.1| Zea mays clone EL01T0206C07.d mRNA sequence 363 5e-97
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 281 2e-72
4gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genom... 281 2e-72
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 281 2e-72
6dbj|AK067956.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 8e-56
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
8dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
9dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone... 50 0.010
10gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.64
11emb|X99260.1|BB103G Bacteriophage B103 genomic sequence 44 0.64
12emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 44 0.64
13gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromo... 42 2.5
14ref|XM_418827.1| PREDICTED: Gallus gallus similar to KIAA0342 pr... 42 2.5
15gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosom... 42 2.5
16gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, c... 42 2.5
17emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on ch... 42 2.5
18gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, c... 42 2.5
19gb|AC020644.7| Homo sapiens chromosome 10 clone RP11-552O21, com... 42 2.5
20gb|AC018980.10| Homo sapiens chromosome 10 clone RP11-476F14, co... 42 2.5
21gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and... 42 2.5
22gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, c... 42 2.5
23gb|AC007378.4| Homo sapiens BAC clone RP11-78I14 from 2, complet... 42 2.5
24gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, c... 42 2.5
25gb|AC125159.4| Mus musculus BAC clone RP24-394C23 from 6, comple... 42 2.5
26ref|NM_129441.2| Arabidopsis thaliana ATP binding / GTP binding ... 40 10.0
27gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, comp... 40 10.0
28gb|BT017853.1| Zea mays clone EL01N0511C02.c mRNA sequence 40 10.0
29gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 10.0
30gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 10.0
31ref|XM_425424.1| PREDICTED: Gallus gallus similar to extracellul... 40 10.0
32ref|XM_591829.2| PREDICTED: Bos taurus similar to CG3764-PA (LOC... 40 10.0
33gb|BT012402.1| Arabidopsis thaliana At2g38850 mRNA, complete cds 40 10.0
34gb|BT012131.1| Arabidopsis thaliana At2g38850 mRNA, complete cds 40 10.0
35ref|XM_883751.1| Candida albicans SC5314 hypothetical protein (C... 40 10.0
36ref|XM_716236.1| Candida albicans SC5314 hypothetical protein (C... 40 10.0
37gb|AC121970.2| Mus musculus BAC clone RP24-275B23 from 1, comple... 40 10.0
38gb|AY422215.1| Erwinia amylovora strain UTRJ2 plasmid pEU30 comp... 40 10.0
39ref|XM_721623.1| Plasmodium yoelii yoelii str. 17XNL erythrocyte... 40 10.0
40gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete... 40 10.0
41gb|AC004957.1| Homo sapiens PAC clone RP5-1093O17 from 7, comple... 40 10.0
42emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chro... 40 10.0
43emb|AL009047.1|HS1156N12 Human DNA sequence from clone RP5-1156N... 40 10.0
44emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 10.0
45emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 10.0
46emb|AL022104.2|SPBC16H5 S.pombe chromosome II cosmid c16H5 40 10.0
47ref|NM_001021847.1| Schizosaccharomyces pombe 972h- hypothetical... 40 10.0
48emb|BX648247.1|HSM808395 Homo sapiens mRNA; cDNA DKFZp686P15108 ... 40 10.0
49gb|AY104326.1| Zea mays PCO064465 mRNA sequence 40 10.0
50gb|AF090441.1|AF090441 Gallus gallus extracellular reelin (Reln)... 40 10.0
51dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 10.0 
>ref|NM_185071.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2122

 Score =  525 bits (265), Expect = e-146
 Identities = 583/689 (84%), Gaps = 7/689 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   agtctgatcttgggcgattggagttcttgtgagagttcttgt---gcagtggcagcag-- 99
            |||||||||| |||||  | ||||||||||| ||| ||||||   | |||||||| ||  
Sbjct: 1816 agtctgatctcgggcgcgttgagttcttgtgggagatcttgttgtggagtggcaggagtg 1757

                                                                        
Query: 100  -cgagcggctgccacgtttccttctagcaaagcaacgccagtaaaaaagccaaaacaata 158
             ||| |||||||| ||||| |||||| | || || |||||||||| |||||||||  | |
Sbjct: 1756 acgatcggctgccccgttttcttctaccgaaacatcgccagtaaagaagccaaaaagaca 1697

                                                                        
Query: 159  gcaatagcgatatggggatcgcccatctgtccagatcgagaagtggactgtacacgatgg 218
              ||||  |  |||||||||||||||||||||||||||||||  || || || ||||| |
Sbjct: 1696 ataatacggcaatggggatcgcccatctgtccagatcgagaatggggctatatacgatag 1637

                                                                        
Query: 219  tttcccaggaagaaacgatgatgtgccaggctggattatagtacaacgattccgctgacc 278
            ||||||| ||||| || ||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 1636 tttcccacgaagagacaatgatgtgccaagctggattatagtacaatgactctgctgacc 1577

                                                                        
Query: 279  agaacattctcgtataagtttctaggaagatgaacatcacccaagcagcaatttcaagta 338
            ||||||| ||||| || || || |||||||||||||||||||| ||| |||| |||||||
Sbjct: 1576 agaacatcctcgtgtacgtctccaggaagatgaacatcacccaggcaacaatctcaagta 1517

                                                                        
Query: 339  aaaagaacttgatgacaaagcgcccaagcacgaccatgaccagagcgaaggtcaccaacc 398
            |||||||||||||||||||||||||||  || |||||||| || | |||||| |||||||
Sbjct: 1516 aaaagaacttgatgacaaagcgcccaataaccaccatgactagggagaaggttaccaacc 1457

                                                                        
Query: 399  aattgaagagtttgttattgtactccttgatgaaaagagcacgagatttgaggagcatct 458
            |||||||||| |||||||||||||||||||| |||||||||||||| ||||  |||||||
Sbjct: 1456 aattgaagagcttgttattgtactccttgataaaaagagcacgagacttgacaagcatct 1397

                                                                        
Query: 459  ttgacatcctatgctcgtatctttcccttgcaggccccacgcattctgttacaaacgtcc 518
            ||||||| ||  ||||||| |||||| ||||||| ||||| |||||  |||||||  | |
Sbjct: 1396 ttgacattctgcgctcgtagctttcctttgcagggcccacacattcccttacaaaacttc 1337

                                                                        
Query: 519  gattgcagtnnnnnnnnncctgcattgaactttgccatggaaggaagtttcaagacctga 578
            |||||||||         |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 1336 gattgcagt-gaaaaaaccctgcattgaactttgccatggaagggagcttcaagacttga 1278

                                                                        
Query: 579  aggtgatccatttgatcttcacattccgagaaacgtgcttcgcaaagcttggatgattga 638
            ||||| ||||||| |||||||||||| ||||| |||||||| || ||||| |||||||||
Sbjct: 1277 aggtggtccattttatcttcacattctgagaagcgtgcttcacacagctttgatgattga 1218

                                                                        
Query: 639  tactcattagctagaaggaagcttttgtacacctttttaatctcatcttcaagcttgagg 698
            |||||||| |||||||||||| || ||||||||||||| |||||||| |||||||| |||
Sbjct: 1217 tactcatttgctagaaggaagtttctgtacaccttttttatctcatcatcaagcttaagg 1158

                                         
Query: 699  actgactgtacagcatgatgcttaccaaa 727
            | ||||||  ||||||| || ||||||||
Sbjct: 1157 attgactgagcagcatggtgtttaccaaa 1129
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>gb|BT018892.1| Zea mays clone EL01T0206C07.d mRNA sequence
          Length = 1944

 Score =  363 bits (183), Expect = 5e-97
 Identities = 261/287 (90%)
 Strand = Plus / Minus

                                                                        
Query: 179  gcccatctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatg 238
            ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 1529 gcccatctgtccagatcaagaattgggctgtacacgatggtttcccaggaagaaacaatg 1470

                                                                        
Query: 239  atgtgccaggctggattatagtacaacgattccgctgaccagaacattctcgtataagtt 298
            |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || || 
Sbjct: 1469 atgtgccaagctggattatagtacagcgattccgctgaccagaacattctcgtgtacgtc 1410

                                                                        
Query: 299  tctaggaagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaag 358
            ||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||
Sbjct: 1409 tctaggaagatgaacatcacccaggcggcgatttcaagtaggaagaacttgatgacaaag 1350

                                                                        
Query: 359  cgcccaagcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattg 418
            ||||| |  || |||||||||| || ||||||||||||||||||||| || |||||||||
Sbjct: 1349 cgcccgatgaccaccatgaccaaagagaaggtcaccaaccaattgaaaagcttgttattg 1290

                                                           
Query: 419  tactccttgatgaaaagagcacgagatttgaggagcatctttgacat 465
            |||||||||||||||||||||||||| |||   ||||||||||||||
Sbjct: 1289 tactccttgatgaaaagagcacgagacttggcaagcatctttgacat 1243



 Score =  180 bits (91), Expect = 4e-42
 Identities = 166/191 (86%)
 Strand = Plus / Minus

                                                                        
Query: 537  cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 596
            ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| | ||||
Sbjct: 1172 cctgcattgaattttgccatcgaaggaagtttcaagacttgaaggtgatccatcttatct 1113

                                                                        
Query: 597  tcacattccgagaaacgtgcttcgcaaagcttggatgattgatactcattagctagaagg 656
            ||||| || || || || ||||| || ||||| || |||||||| |||||||||||||| 
Sbjct: 1112 tcacactcagaaaagcgagcttcacacagctttgacgattgatattcattagctagaagt 1053

                                                                        
Query: 657  aagcttttgtacacctttttaatctcatcttcaagcttgaggactgactgtacagcatga 716
            ||| || |||||||||||||||| |||||||||||||||||  |||||||  ||||||||
Sbjct: 1052 aagtttctgtacacctttttaatatcatcttcaagcttgagtgctgactgagcagcatga 993

                       
Query: 717  tgcttaccaaa 727
            || || |||||
Sbjct: 992  tgtttgccaaa 982
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  281 bits (142), Expect = 2e-72
 Identities = 241/274 (87%)
 Strand = Plus / Minus

                                                                            
Query: 185      ctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatgatgtgc 244
                ||||||||||||||||  || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 32882585 ctgtccagatcgagaatggggctatatacgatagtttcccacgaagagacaatgatgtgc 32882526

                                                                            
Query: 245      caggctggattatagtacaacgattccgctgaccagaacattctcgtataagtttctagg 304
                || ||||||||||||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 32882525 caagctggattatagtacaatgactctgctgaccagaacatcctcgtgtacgtctccagg 32882466

                                                                            
Query: 305      aagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaagcgccca 364
                ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 32882465 aagatgaacatcacccaggcaacaatctcaagtaaaaagaacttgatgacaaagcgccca 32882406

                                                                            
Query: 365      agcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtactcc 424
                |  || |||||||| || | |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 32882405 ataaccaccatgactagggagaaggttaccaaccaattgaagagcttgttattgtactcc 32882346

                                                  
Query: 425      ttgatgaaaagagcacgagatttgaggagcatct 458
                ||||| |||||||||||||| ||||  |||||||
Sbjct: 32882345 ttgataaaaagagcacgagacttgacaagcatct 32882312



 Score =  167 bits (84), Expect = 6e-38
 Identities = 123/136 (90%)
 Strand = Plus / Minus

                                                                            
Query: 537      cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 596
                |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 32881721 cctgcattgaactttgccatggaagggagcttcaagacttgaaggtggtccattttatct 32881662

                                                                            
Query: 597      tcacattccgagaaacgtgcttcgcaaagcttggatgattgatactcattagctagaagg 656
                |||||||| ||||| |||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 32881661 tcacattctgagaagcgtgcttcacacagctttgatgattgatactcatttgctagaagg 32881602

                                
Query: 657      aagcttttgtacacct 672
                ||| || |||||||||
Sbjct: 32881601 aagtttctgtacacct 32881586
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>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete
              sequence
          Length = 151479

 Score =  281 bits (142), Expect = 2e-72
 Identities = 241/274 (87%)
 Strand = Plus / Plus

                                                                          
Query: 185    ctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatgatgtgc 244
              ||||||||||||||||  || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 107590 ctgtccagatcgagaatggggctatatacgatagtttcccacgaagagacaatgatgtgc 107649

                                                                          
Query: 245    caggctggattatagtacaacgattccgctgaccagaacattctcgtataagtttctagg 304
              || ||||||||||||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 107650 caagctggattatagtacaatgactctgctgaccagaacatcctcgtgtacgtctccagg 107709

                                                                          
Query: 305    aagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaagcgccca 364
              ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 107710 aagatgaacatcacccaggcaacaatctcaagtaaaaagaacttgatgacaaagcgccca 107769

                                                                          
Query: 365    agcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtactcc 424
              |  || |||||||| || | |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 107770 ataaccaccatgactagggagaaggttaccaaccaattgaagagcttgttattgtactcc 107829

                                                
Query: 425    ttgatgaaaagagcacgagatttgaggagcatct 458
              ||||| |||||||||||||| ||||  |||||||
Sbjct: 107830 ttgataaaaagagcacgagacttgacaagcatct 107863



 Score =  167 bits (84), Expect = 6e-38
 Identities = 123/136 (90%)
 Strand = Plus / Plus

                                                                          
Query: 537    cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 596
              |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 108454 cctgcattgaactttgccatggaagggagcttcaagacttgaaggtggtccattttatct 108513

                                                                          
Query: 597    tcacattccgagaaacgtgcttcgcaaagcttggatgattgatactcattagctagaagg 656
              |||||||| ||||| |||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 108514 tcacattctgagaagcgtgcttcacacagctttgatgattgatactcatttgctagaagg 108573

                              
Query: 657    aagcttttgtacacct 672
              ||| || |||||||||
Sbjct: 108574 aagtttctgtacacct 108589
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  281 bits (142), Expect = 2e-72
 Identities = 241/274 (87%)
 Strand = Plus / Minus

                                                                            
Query: 185      ctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatgatgtgc 244
                ||||||||||||||||  || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 32973095 ctgtccagatcgagaatggggctatatacgatagtttcccacgaagagacaatgatgtgc 32973036

                                                                            
Query: 245      caggctggattatagtacaacgattccgctgaccagaacattctcgtataagtttctagg 304
                || ||||||||||||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 32973035 caagctggattatagtacaatgactctgctgaccagaacatcctcgtgtacgtctccagg 32972976

                                                                            
Query: 305      aagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaagcgccca 364
                ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 32972975 aagatgaacatcacccaggcaacaatctcaagtaaaaagaacttgatgacaaagcgccca 32972916

                                                                            
Query: 365      agcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtactcc 424
                |  || |||||||| || | |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 32972915 ataaccaccatgactagggagaaggttaccaaccaattgaagagcttgttattgtactcc 32972856

                                                  
Query: 425      ttgatgaaaagagcacgagatttgaggagcatct 458
                ||||| |||||||||||||| ||||  |||||||
Sbjct: 32972855 ttgataaaaagagcacgagacttgacaagcatct 32972822



 Score =  167 bits (84), Expect = 6e-38
 Identities = 123/136 (90%)
 Strand = Plus / Minus

                                                                            
Query: 537      cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 596
                |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 32972231 cctgcattgaactttgccatggaagggagcttcaagacttgaaggtggtccattttatct 32972172

                                                                            
Query: 597      tcacattccgagaaacgtgcttcgcaaagcttggatgattgatactcattagctagaagg 656
                |||||||| ||||| |||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 32972171 tcacattctgagaagcgtgcttcacacagctttgatgattgatactcatttgctagaagg 32972112

                                
Query: 657      aagcttttgtacacct 672
                ||| || |||||||||
Sbjct: 32972111 aagtttctgtacacct 32972096
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>dbj|AK067956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127B03, full
            insert sequence
          Length = 2380

 Score =  226 bits (114), Expect = 8e-56
 Identities = 273/326 (83%)
 Strand = Plus / Minus

                                                                        
Query: 173  gggatcgcccatctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaa 232
            |||||| |||||||||| | ||| |||| |||  | ||||| ||||||||||| ||||| 
Sbjct: 1883 gggatcacccatctgtcaatatcaagaactgggttatacacaatggtttcccatgaagag 1824

                                                                        
Query: 233  acgatgatgtgccaggctggattatagtacaacgattccgctgaccagaacattctcgta 292
            ||||| |||||||||   ||||| ||||||||| |||| |  |||||||| | |||||| 
Sbjct: 1823 acgatcatgtgccagatgggattgtagtacaacaattctgacgaccagaataatctcgtg 1764

                                                                        
Query: 293  taagtttctaggaagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatg 352
            || || |||| ||||||||| |||||||| ||||||| ||| ||||||||||||||||| 
Sbjct: 1763 tatgtctctaagaagatgaatatcacccatgcagcaacttcgagtaaaaagaacttgatc 1704

                                                                        
Query: 353  acaaagcgcccaagcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttg 412
            ||||||||| ||| ||| | ||||||||  | ||| ||||||| ||||||||| ||||||
Sbjct: 1703 acaaagcgcgcaatcacaatcatgaccaaggagaacgtcaccagccaattgaatagtttg 1644

                                                                        
Query: 413  ttattgtactccttgatgaaaagagcacgagatttgaggagcatctttgacatcctatgc 472
            || |||||||||||||||||||||||||||||  |   ||||||||||||||||||| | 
Sbjct: 1643 ttgttgtactccttgatgaaaagagcacgagaccttgcgagcatctttgacatcctacgt 1584

                                      
Query: 473  tcgtatctttcccttgcaggccccac 498
            || || |||||| | |||||||||||
Sbjct: 1583 tcatagctttccttggcaggccccac 1558
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  198 bits (100), Expect = 2e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                           
Query: 209     tacacgatggtttcccaggaagaaacgatgatgtgccaggctggattatagtacaacgat 268
               ||||| ||||||||||| ||||| ||||| |||||||||   ||||| ||||||||| ||
Sbjct: 4350350 tacacaatggtttcccatgaagagacgatcatgtgccagatgggattgtagtacaacaat 4350291

                                                                           
Query: 269     tccgctgaccagaacattctcgtataagtttctaggaagatgaacatcacccaagcagca 328
               || |  |||||||| | |||||| || || |||| ||||||||| |||||||| ||||||
Sbjct: 4350290 tctgacgaccagaataatctcgtgtatgtctctaagaagatgaatatcacccatgcagca 4350231

                                                                           
Query: 329     atttcaagtaaaaagaacttgatgacaaagcgcccaagcacgaccatgaccagagcgaag 388
               | ||| ||||||||||||||||| ||||||||| ||| ||| | ||||||||  | ||| 
Sbjct: 4350230 acttcgagtaaaaagaacttgatcacaaagcgcgcaatcacaatcatgaccaaggagaac 4350171

                                                                       
Query: 389     gtcaccaaccaattgaagagtttgttattgtactccttgatgaaaagagcacgaga 444
               ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 4350170 gtcaccagccaattgaatagtttgttgttgtactccttgatgaaaagagcacgaga 4350115
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>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score =  198 bits (100), Expect = 2e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                          
Query: 209    tacacgatggtttcccaggaagaaacgatgatgtgccaggctggattatagtacaacgat 268
              ||||| ||||||||||| ||||| ||||| |||||||||   ||||| ||||||||| ||
Sbjct: 171404 tacacaatggtttcccatgaagagacgatcatgtgccagatgggattgtagtacaacaat 171345

                                                                          
Query: 269    tccgctgaccagaacattctcgtataagtttctaggaagatgaacatcacccaagcagca 328
              || |  |||||||| | |||||| || || |||| ||||||||| |||||||| ||||||
Sbjct: 171344 tctgacgaccagaataatctcgtgtatgtctctaagaagatgaatatcacccatgcagca 171285

                                                                          
Query: 329    atttcaagtaaaaagaacttgatgacaaagcgcccaagcacgaccatgaccagagcgaag 388
              | ||| ||||||||||||||||| ||||||||| ||| ||| | ||||||||  | ||| 
Sbjct: 171284 acttcgagtaaaaagaacttgatcacaaagcgcgcaatcacaatcatgaccaaggagaac 171225

                                                                      
Query: 389    gtcaccaaccaattgaagagtttgttattgtactccttgatgaaaagagcacgaga 444
              ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 171224 gtcaccagccaattgaatagtttgttgttgtactccttgatgaaaagagcacgaga 171169
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>dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375b,
             complete sequence
          Length = 61653

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 362   ccaagcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtac 421
             |||| ||| ||||||||||| | ||||| ||||||||||||||| ||  |||  ||||||
Sbjct: 17813 ccaatcactaccatgaccagggagaaggccaccaaccaattgaaaagcctgtggttgtac 17872

                  
Query: 422   tcctt 426
             |||||
Sbjct: 17873 tcctt 17877
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>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete
             sequence
          Length = 196474

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 417   tgtactccttgatgaaaagagc 438
             ||||||||||||||||||||||
Sbjct: 48447 tgtactccttgatgaaaagagc 48426
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>emb|X99260.1|BB103G Bacteriophage B103 genomic sequence
          Length = 18630

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 250   tggattatagtacaacgattcc 271
             ||||||||||||||||||||||
Sbjct: 15996 tggattatagtacaacgattcc 15975
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 137     cagtaaaaaagccaaaacaata 158
               ||||||||||||||||||||||
Sbjct: 1367299 cagtaaaaaagccaaaacaata 1367320
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>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete
              sequence
          Length = 155024

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    aatttcaagtaaaaagaactt 348
              |||||||||||||||||||||
Sbjct: 143162 aatttcaagtaaaaagaactt 143182
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>ref|XM_418827.1| PREDICTED: Gallus gallus similar to KIAA0342 protein (LOC420728),
            mRNA
          Length = 12717

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 18   ctccctgcagaaacaaagcct 38
            |||||||||||||||||||||
Sbjct: 7537 ctccctgcagaaacaaagcct 7517
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>gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosome 6, complete sequence
          Length = 137122

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 573    acctgaaggtgatccatttga 593
              |||||||||||||||||||||
Sbjct: 135747 acctgaaggtgatccatttga 135767
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>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence
          Length = 190653

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    tgatcttgggcgattggagttcttg 73
             ||||||||||| |||||||||||||
Sbjct: 83384 tgatcttgggccattggagttcttg 83408
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>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a
              novel gene, the Tob1 gene for transducer of ErbB-2.1, the
              gene for a novel protein (AY100450) (WFIKKN-like growth and
              differentiation factor-associated serum protein 1) (Gasp1),
              a novel gene, the gene for a novel protein (3300001P08Rik)
              (Luc7a) and one CpG island, complete sequence
          Length = 188962

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 562    gaagtttcaagacctgaaggtgatc 586
              ||||||||||| |||||||||||||
Sbjct: 137445 gaagtttcaaggcctgaaggtgatc 137469
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>gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, complete sequence
          Length = 180741

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 328 aatttcaagtaaaaagaactt 348
           |||||||||||||||||||||
Sbjct: 539 aatttcaagtaaaaagaactt 559
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>gb|AC020644.7| Homo sapiens chromosome 10 clone RP11-552O21, complete sequence
          Length = 197720

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 434   agagcacgagatttgaggagcatct 458
             |||||||||| ||||||||||||||
Sbjct: 84532 agagcacgagttttgaggagcatct 84556
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>gb|AC018980.10| Homo sapiens chromosome 10 clone RP11-476F14, complete sequence
          Length = 197709

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 434   agagcacgagatttgaggagcatct 458
             |||||||||| ||||||||||||||
Sbjct: 84530 agagcacgagttttgaggagcatct 84554
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>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial
             sequence
          Length = 236303

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 372   ccatgaccagagcgaaggtca 392
             |||||||||||||||||||||
Sbjct: 87218 ccatgaccagagcgaaggtca 87238
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>gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, complete sequence
          Length = 151800

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   aatttcaagtaaaaagaactt 348
             |||||||||||||||||||||
Sbjct: 72895 aatttcaagtaaaaagaactt 72875
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>gb|AC007378.4| Homo sapiens BAC clone RP11-78I14 from 2, complete sequence
          Length = 179357

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   ccatgaccagagcgaaggtca 392
             |||||||||||||||||||||
Sbjct: 91944 ccatgaccagagcgaaggtca 91924
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>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence
          Length = 192533

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 328    aatttcaagtaaaaagaactt 348
              |||||||||||||||||||||
Sbjct: 104588 aatttcaagtaaaaagaactt 104568
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>gb|AC125159.4| Mus musculus BAC clone RP24-394C23 from 6, complete sequence
          Length = 190966

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 573   acctgaaggtgatccatttga 593
             |||||||||||||||||||||
Sbjct: 44404 acctgaaggtgatccatttga 44424
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>ref|NM_129441.2| Arabidopsis thaliana ATP binding / GTP binding / GTPase AT2G38840
            mRNA, complete cds
          Length = 2281

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 176  atcgcccatctgtccagatcgagaagtggactgtacacga 215
            ||||||||||||||||  |||||||  ||||| |||||||
Sbjct: 1907 atcgcccatctgtccaagtcgagaacaggactatacacga 1868
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>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 703   actgtacagcatgatgctta 722
             ||||||||||||||||||||
Sbjct: 62413 actgtacagcatgatgctta 62394
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>gb|BT017853.1| Zea mays clone EL01N0511C02.c mRNA sequence
          Length = 882

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 aagagcacgagatttgagga 452
           ||||||||||||||||||||
Sbjct: 60  aagagcacgagatttgagga 79
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     aacttgatgacaaagcgccc 363
               ||||||||||||||||||||
Sbjct: 1137092 aacttgatgacaaagcgccc 1137111
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
              genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 135    gccagtaaaaaagccaaaacaata 158
              |||| |||||||||||||||||||
Sbjct: 812050 gccaataaaaaagccaaaacaata 812027
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>ref|XM_425424.1| PREDICTED: Gallus gallus similar to extracellular reelin (LOC427850),
            mRNA
          Length = 12363

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  tgaacatcacccaagcagca 328
            ||||||||||||||||||||
Sbjct: 7896 tgaacatcacccaagcagca 7915
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>ref|XM_591829.2| PREDICTED: Bos taurus similar to CG3764-PA (LOC514041), mRNA
          Length = 3006

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  gaccatgaccagagcgaagg 389
            ||||||||||||||||||||
Sbjct: 2479 gaccatgaccagagcgaagg 2498
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>gb|BT012402.1| Arabidopsis thaliana At2g38850 mRNA, complete cds
          Length = 546

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 176 atcgcccatctgtccagatcgagaagtggactgtacacga 215
           ||||||||||||||||  |||||||  ||||| |||||||
Sbjct: 413 atcgcccatctgtccaagtcgagaacaggactatacacga 374
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>gb|BT012131.1| Arabidopsis thaliana At2g38850 mRNA, complete cds
          Length = 939

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 176 atcgcccatctgtccagatcgagaagtggactgtacacga 215
           ||||||||||||||||  |||||||  ||||| |||||||
Sbjct: 465 atcgcccatctgtccaagtcgagaacaggactatacacga 426
to top
>ref|XM_883751.1| Candida albicans SC5314 hypothetical protein (CaJ7.0262) partial
           mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 aacaatagcaatagcgatat 171
           ||||||||||||||||||||
Sbjct: 529 aacaatagcaatagcgatat 548
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>ref|XM_716236.1| Candida albicans SC5314 hypothetical protein (CaO19.6488) partial
           mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 aacaatagcaatagcgatat 171
           ||||||||||||||||||||
Sbjct: 529 aacaatagcaatagcgatat 548
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>gb|AC121970.2| Mus musculus BAC clone RP24-275B23 from 1, complete sequence
          Length = 179612

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   aagccaaaacaatagcaata 164
             ||||||||||||||||||||
Sbjct: 39905 aagccaaaacaatagcaata 39924
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>gb|AY422215.1| Erwinia amylovora strain UTRJ2 plasmid pEU30 complete sequence
          Length = 30314

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   acgatggtttcccaggaaga 231
             ||||||||||||||||||||
Sbjct: 25308 acgatggtttcccaggaaga 25327
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>ref|XM_721623.1| Plasmodium yoelii yoelii str. 17XNL erythrocyte membrane protein
           (PY06125) partial mRNA
          Length = 4998

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 aacaatagcaatagcgatat 171
           ||||||||||||||||||||
Sbjct: 481 aacaatagcaatagcgatat 500



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 aacaatagcaatagcgatat 171
           ||||||||||||||||||||
Sbjct: 193 aacaatagcaatagcgatat 212
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>gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete sequence
          Length = 94255

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   tggaaggaagtttcaagacc 575
             ||||||||||||||||||||
Sbjct: 28412 tggaaggaagtttcaagacc 28431
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>gb|AC004957.1| Homo sapiens PAC clone RP5-1093O17 from 7, complete sequence
          Length = 160687

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ggagttcttgtgagagttct 83
              ||||||||||||||||||||
Sbjct: 126794 ggagttcttgtgagagttct 126813
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>emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chromosome 13 Contains a
             ribosomal protein L39 (RPL39) pseudogene and the 3' end of
             a novel gene, complete sequence
          Length = 105247

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   gcaatttcaagtaaaaagaa 345
             ||||||||||||||||||||
Sbjct: 84586 gcaatttcaagtaaaaagaa 84567
to top
>emb|AL009047.1|HS1156N12 Human DNA sequence from clone RP5-1156N12 on chromosome X, complete
             sequence
          Length = 146360

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 663   ttgtacacctttttaatctc 682
             ||||||||||||||||||||
Sbjct: 71519 ttgtacacctttttaatctc 71538
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 135    gccagtaaaaaagccaaaacaata 158
              |||| |||||||||||||||||||
Sbjct: 885140 gccaataaaaaagccaaaacaata 885117
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 135    gccagtaaaaaagccaaaacaata 158
              |||| |||||||||||||||||||
Sbjct: 904551 gccaataaaaaagccaaaacaata 904528
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>emb|AL022104.2|SPBC16H5 S.pombe chromosome II cosmid c16H5
          Length = 35660

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   ttgatgaaaagagcacgaga 444
             ||||||||||||||||||||
Sbjct: 16087 ttgatgaaaagagcacgaga 16068
to top
>ref|NM_001021847.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC16H5.08c), partial mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 ttgatgaaaagagcacgaga 444
           ||||||||||||||||||||
Sbjct: 713 ttgatgaaaagagcacgaga 694
to top
>emb|BX648247.1|HSM808395 Homo sapiens mRNA; cDNA DKFZp686P15108 (from clone DKFZp686P15108)
          Length = 7737

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 556  tggaaggaagtttcaagacc 575
            ||||||||||||||||||||
Sbjct: 3502 tggaaggaagtttcaagacc 3483
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>gb|AY104326.1| Zea mays PCO064465 mRNA sequence
          Length = 879

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 aagagcacgagatttgagga 452
           ||||||||||||||||||||
Sbjct: 176 aagagcacgagatttgagga 195
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>gb|AF090441.1|AF090441 Gallus gallus extracellular reelin (Reln) mRNA, partial cds
          Length = 10634

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  tgaacatcacccaagcagca 328
            ||||||||||||||||||||
Sbjct: 5461 tgaacatcacccaagcagca 5480
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    aacaatagcaatagcgatat 171
              ||||||||||||||||||||
Sbjct: 489828 aacaatagcaatagcgatat 489847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,518,235
Number of Sequences: 3902068
Number of extensions: 6518235
Number of successful extensions: 120773
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120398
Number of HSP's gapped (non-prelim): 374
length of query: 727
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 704
effective length of database: 17,143,297,704
effective search space: 12068881583616
effective search space used: 12068881583616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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