ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal12n09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ALL1_OLEEU (P19963) Major pollen allergen (Allergen Ole e 1) (Ol... 36 0.098
2CHE1_CHEAL (Q8LGR0) Pollen allergen Che a 1 precursor 34 0.49
3LIGV1_LIGVU (O82015) Major pollen allergen Lig v 1 32 1.9
4KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-ass... 31 4.1
5E316_ADE03 (P11320) Early E3 16 kDa glycoprotein 30 7.1
6UVRA_CHLMU (Q9PK60) UvrABC system protein A (UvrA protein) (Exci... 30 9.2
7GR85A_DROME (Q8INM9) Putative gustatory receptor 85a 30 9.2
8LOLB_LOLPR (Q7M1X5) Major pollen allergen Lol p 11 (Lol p XI) 30 9.2

>ALL1_OLEEU (P19963) Major pollen allergen (Allergen Ole e 1) (Ole e I)|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
 Frame = -3

Query: 521 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEVINYQ--AFTNYKGVYSVAETMP 348
           I+G+V CD C    I      + GA + + C  K    + +    +T  +G+YS+   + 
Sbjct: 13  IQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSM--LVE 70

Query: 347 ESDRWDSCLARPISSFHQHCTR---RGDAHSGVKFTYNKQSGSSHNV 216
              + + C    ISS  + C      G A   +KF  N  +G++  V
Sbjct: 71  RDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTV 117



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>CHE1_CHEAL (Q8LGR0) Pollen allergen Che a 1 precursor|
          Length = 168

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = -3

Query: 524 EIRGRVVCDVCADSAIGPEDHVLEGAEVAVLC--ITKSGEVINYQAFTNYKGVYSVAETM 351
           +++G V CD C    +     ++EGA V + C  IT   +    +A T+  G YS+    
Sbjct: 31  KVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNG 90

Query: 350 PESDRWDSCLARPISSFHQHCTRRGD---AHSGVKFTYNKQSGSSHNVKT 210
              D  D C    + S +  C+       A    K +    +G + ++++
Sbjct: 91  DFED--DICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRS 138



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>LIGV1_LIGVU (O82015) Major pollen allergen Lig v 1|
          Length = 145

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
 Frame = -3

Query: 521 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGE----VINYQAFTNYKGVYSVAET 354
           I+G+V CD C    I      + GA V + C  K GE          +T  +G+Y++   
Sbjct: 13  IQGQVYCDTCRARFITELSEFIPGAGVRLQC--KDGENGKVTFTEVGYTKAEGLYNM--L 68

Query: 353 MPESDRWDSCLARPISSFHQHCTR---RGDAHSGVKFTYNKQSGSSHNV 216
           +    + + C    ISS  + C      G     +KF  N  +G++  +
Sbjct: 69  IERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTI 117



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>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
 Frame = +2

Query: 188 CWQACRGTS*RCASSPTVCCM*T*PQSVHRPSWCN--------AGGSC*WASPGTNPIGR 343
           C   CR TS +     T CC  T   S  +PS C+         G SC   +   +  G+
Sbjct: 48  CQPCCRPTSCQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQ 107

Query: 344 SQALSLQRCRHPC 382
           S + +   CR  C
Sbjct: 108 SSSCAPVYCRRTC 120



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>E316_ADE03 (P11320) Early E3 16 kDa glycoprotein|
          Length = 146

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
 Frame = +1

Query: 43  PSVTDIGYNSRWADHYKHTVDQHLPYSDLTTSRPGM--------NPSYRFQLQYRGMLAG 198
           PS T++   ++ A H +H + + L  ++ TT + G         +P         G++AG
Sbjct: 57  PSTTNLPETNKLASHLQHRLSRSLLSANTTTPKTGGELRGLPTDDPWVVAGFVTLGVVAG 116

Query: 199 L*RNVLTLCELPDCLLYVNLTPECASPLLVQCWWK 303
               VL LC L         TP CA  +++ CW+K
Sbjct: 117 --GLVLILCYL--------YTPCCAYLVILCCWFK 141



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>UVRA_CHLMU (Q9PK60) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 1787

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 392 FTNYKGVYSVAETMPESDRWDSCLARPISSFHQHCTRRGDAH-SGVKFTYNKQSGSSHNV 216
           F N K V+S   T+PE+    + L+  + S H H  R    H SG+  + N  S    N+
Sbjct: 231 FDNQKRVFSTQTTLPETQNTYTPLSPDLFSSHSHKDRCPQCHGSGIFVSINDPSIIQQNL 290



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>GR85A_DROME (Q8INM9) Putative gustatory receptor 85a|
          Length = 397

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 223 CELPDCLLY-VNLTPECASPLLVQCWWKLLMGLARHESHRSLSGI 354
           C LP+C+++ +N         + +CWW L  GL     +R LS +
Sbjct: 186 CFLPECMIFSMNYLLFAILAEITRCWWSLQSGLKMVLLNRQLSTV 230



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>LOLB_LOLPR (Q7M1X5) Major pollen allergen Lol p 11 (Lol p XI)|
          Length = 134

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -3

Query: 521 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSG--EVINYQAFTNYKGVYSV 363
           + GRV CD C         H +EGA VAV C    G    +  +A T+  G Y +
Sbjct: 8   VTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKI 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,703,331
Number of Sequences: 219361
Number of extensions: 1814349
Number of successful extensions: 5165
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5163
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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