Clone Name	rbaal12n09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_465260.1| Oryza sativa (japonica cultivar-group), mRNA	412	e-112
2	gb|AY104587.1| Zea mays PCO104634 mRNA sequence	311	2e-81
3	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	250	5e-63
4	dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic D...	250	5e-63
5	dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D...	250	5e-63
6	ref|NM_124867.2| Arabidopsis thaliana unknown protein AT5G54855 ...	117	5e-23
7	gb|AY093718.1| Arabidopsis thaliana AT1g27100/T7N9_16 mRNA, comp...	117	5e-23
8	gb|AF410270.1|AF410270 Arabidopsis thaliana unknown protein mRNA...	117	5e-23
9	dbj|AK118946.1| Arabidopsis thaliana At5g54855 mRNA for unknown ...	117	5e-23
10	dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	113	8e-22
11	gb|AY088675.1| Arabidopsis thaliana clone 9159 mRNA, complete se...	109	1e-20
12	emb|BX830033.1|CNS0A053 Arabidopsis thaliana Full-length cDNA Co...	84	7e-13
13	gb|AY364845.1| Virus PhiCh1 pBgB51 capsid protein, int1, and cap...	42	2.4
14	gb|AY364843.1| Virus PhiCh1 pBgB5 ORF34-5, integrase, and ORF36-...	42	2.4
15	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	42	2.4
16	gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, compl...	42	2.4
17	gb|AF440695.1| Virus PhiCh1, complete genome	42	2.4
18	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.4
19	gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome...	42	2.4
20	gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase g...	40	9.6
21	gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, co...	40	9.6
22	gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynt...	40	9.6
23	emb|CR674137.2|CNS0FJ4V Tetraodon nigroviridis full-length cDNA	40	9.6
24	gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, compl...	40	9.6
25	emb|Z82188.2|HS151B14 Human DNA sequence from clone RP1-151B14 o...	40	9.6
26	emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chr...	40	9.6
27	gb|BC023640.1| Homo sapiens, clone IMAGE:4890344, mRNA	40	9.6
28	emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ...	40	9.6
29	emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ...	40	9.6
30	gb|AE012496.1| Xanthomonas campestris pv. campestris str. ATCC 3...	40	9.6
31	gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, c...	40	9.6
32	gb|AF196488.2|AF196488 Mycobacterium smegmatis hypothetical prot...	40	9.6
33	gb|CP000249.1| Frankia sp. CcI3, complete genome	40	9.6
34	gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome...	40	9.6
35	gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...	40	9.6
36	gb|AC022088.5|AC022088 Homo sapiens chromosome 5 clone CTB-110D2...	40	9.6
37	gb|AC120182.8| Mus musculus chromosome 1, clone RP24-501C2, comp...	40	9.6
38	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	9.6
39	gb|AF031418.3| Pseudomonas putida FliK (fliK), FliL, FliM (fliM)...	40	9.6
40	gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome...	40	9.6
41	dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...	40	9.6
42	gb|AC008572.6|AC008572 Homo sapiens chromosome 5 clone CTC-551A1...	40	9.6
43	gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, comp...	40	9.6
44	gb|M63676.1|SERERYAA Saccharopolyspora erythraea EryA (eryA) gen...	40	9.6
45	gb|AC142191.5| Mus musculus BAC clone RP24-530N5 from 6, complet...	40	9.6
46	emb|AL512361.3|CNS07EFA Human chromosome 14 DNA sequence BAC R-3...	40	9.6

---

>ref|XM_465260.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 468

 Score =  412 bits (208), Expect = e-112
 Identities = 340/384 (88%)
 Strand = Plus / Minus

                                                                       
Query: 189 gttggcaggcttgtagaggaacgtcttgacgttgtgcgagctccccgactgtttgttgta 248
           ||||||||||||||||||||||||||||||| |||| ||| | || ||  | ||| ||||
Sbjct: 447 gttggcaggcttgtagaggaacgtcttgacggtgtgagagtttcctgaaggcttgctgta 388

                                                                       
Query: 249 tgtgaacttgaccccagagtgtgcatcgcccctcctggtgcaatgctggtggaagctgct 308
           ||||||||||||||||||||||| ||| |||||| | |||||||||||||| ||||||||
Sbjct: 387 tgtgaacttgaccccagagtgtgtatcacccctcttagtgcaatgctggtgaaagctgct 328

                                                                       
Query: 309 gatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgtctctgcaacgct 368
           ||||||||| |||| ||| || ||||| ||||| ||||| ||||| ||||| |||||  |
Sbjct: 327 gatgggccttgccaagcatgactcccaacggtcactctctggcatcgtctccgcaacaat 268

                                                                       
Query: 369 gtagacacccttgtagtttgtgaacgcctggtagttgatgacctcaccagatttcgtgat 428
           ||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||
Sbjct: 267 gtagacacccttggagtttgtgaaggcctggtagttgataacttcaccagatctcgtgat 208

                                                                       
Query: 429 gcacagaacagcaacctcagcgccttcgaggacgtggtcctcggggccgatggcagagtc 488
           ||| || || |||||||| || |||||||||||||||||||||||||||||||| | |||
Sbjct: 207 gcagaggacggcaacctcggcaccttcgaggacgtggtcctcggggccgatggcggcgtc 148

                                                                       
Query: 489 cgcgcagacgtcgcagacgacgcggccgcggatctcccccgtccaagcctcggccgccgg 548
           | |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 147 cccgcagacgtcgcagacgacgtggccgcggatctcccccgtccacgcctcggccgccgg 88

                                   
Query: 549 ggccgcggccagcaggaaagcgag 572
           ||||||  ||||||| || |||||
Sbjct: 87  ggccgctaccagcagcaaggcgag 64

---

>gb|AY104587.1| Zea mays PCO104634 mRNA sequence
          Length = 903

 Score =  311 bits (157), Expect = 2e-81
 Identities = 307/357 (85%)
 Strand = Plus / Minus

                                                                       
Query: 191 tggcaggcttgtagaggaacgtcttgacgttgtgcgagctccccgactgtttgttgtatg 250
           |||| |||||||||||||| | ||||||| |||||| | |||| |||  ||||||||| |
Sbjct: 599 tggccggcttgtagaggaaaggcttgacggtgtgcgggttcccagacgatttgttgtaag 540

                                                                       
Query: 251 tgaacttgaccccagagtgtgcatcgcccctcctggtgcaatgctggtggaagctgctga 310
           ||||||| ||||||||||| ||||| |||| ||  ||||||||  | ||||||||||| |
Sbjct: 539 tgaacttcaccccagagtgagcatcaccccgccgtgtgcaatgtagatggaagctgctca 480

                                                                       
Query: 311 tgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgtctctgcaacgctgt 370
           | |||||||||| |||||| ||||| | ||||||||| ||||| ||||| || ||  | |
Sbjct: 479 taggcctcgccaagcacgagtcccacctgtcgctctccggcatagtctcggcgacagtat 420

                                                                       
Query: 371 agacacccttgtagtttgtgaacgcctggtagttgatgacctcaccagatttcgtgatgc 430
           | || |||||| |||||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 419 acacgcccttggagtttgtgaaggcttgatagttgataacctcaccagattttgtgatgc 360

                                                                       
Query: 431 acagaacagcaacctcagcgccttcgaggacgtggtcctcggggccgatggcagagtccg 490
           | || ||||||||||| || ||||||||| |||||||||| ||||||||||| | |||  
Sbjct: 359 agaggacagcaacctccgcaccttcgagggcgtggtcctccgggccgatggctgcgtcgc 300

                                                                    
Query: 491 cgcagacgtcgcagacgacgcggccgcggatctcccccgtccaagcctcggccgccg 547
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cgcagacgtcgcagacgacgcggccgcggatctcccccgtccaagcctcggccgccg 243

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  250 bits (126), Expect = 5e-63
 Identities = 225/258 (87%)
 Strand = Plus / Plus

                                                                            
Query: 189      gttggcaggcttgtagaggaacgtcttgacgttgtgcgagctccccgactgtttgttgta 248
                ||||||||||||||||||||||||||||||| |||| ||| | || ||  | ||| ||||
Sbjct: 12629423 gttggcaggcttgtagaggaacgtcttgacggtgtgagagtttcctgaaggcttgctgta 12629482

                                                                            
Query: 249      tgtgaacttgaccccagagtgtgcatcgcccctcctggtgcaatgctggtggaagctgct 308
                ||||||||||||||||||||||| ||| |||||| | |||||||||||||| ||||||||
Sbjct: 12629483 tgtgaacttgaccccagagtgtgtatcacccctcttagtgcaatgctggtgaaagctgct 12629542

                                                                            
Query: 309      gatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgtctctgcaacgct 368
                ||||||||| |||| ||| || ||||| ||||| ||||| ||||| ||||| |||||  |
Sbjct: 12629543 gatgggccttgccaagcatgactcccaacggtcactctctggcatcgtctccgcaacaat 12629602

                                                                            
Query: 369      gtagacacccttgtagtttgtgaacgcctggtagttgatgacctcaccagatttcgtgat 428
                ||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||
Sbjct: 12629603 gtagacacccttggagtttgtgaaggcctggtagttgataacttcaccagatctcgtgat 12629662

                                  
Query: 429      gcacagaacagcaacctc 446
                ||| || || ||||||||
Sbjct: 12629663 gcagaggacggcaacctc 12629680



 Score =  170 bits (86), Expect = 4e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                            
Query: 451      ccttcgaggacgtggtcctcggggccgatggcagagtccgcgcagacgtcgcagacgacg 510
                |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 12632346 ccttcgaggacgtggtcctcggggccgatggcggcgtccccgcagacgtcgcagacgacg 12632405

                                                                            
Query: 511      cggccgcggatctcccccgtccaagcctcggccgccggggccgcggccagcaggaaagcg 570
                 |||||||||||||||||||||| ||||||||||||||||||||  ||||||| || |||
Sbjct: 12632406 tggccgcggatctcccccgtccacgcctcggccgccggggccgctaccagcagcaaggcg 12632465

                  
Query: 571      ag 572
                ||
Sbjct: 12632466 ag 12632467

---

>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_B09
          Length = 105247

 Score =  250 bits (126), Expect = 5e-63
 Identities = 225/258 (87%)
 Strand = Plus / Plus

                                                                         
Query: 189   gttggcaggcttgtagaggaacgtcttgacgttgtgcgagctccccgactgtttgttgta 248
             ||||||||||||||||||||||||||||||| |||| ||| | || ||  | ||| ||||
Sbjct: 26482 gttggcaggcttgtagaggaacgtcttgacggtgtgagagtttcctgaaggcttgctgta 26541

                                                                         
Query: 249   tgtgaacttgaccccagagtgtgcatcgcccctcctggtgcaatgctggtggaagctgct 308
             ||||||||||||||||||||||| ||| |||||| | |||||||||||||| ||||||||
Sbjct: 26542 tgtgaacttgaccccagagtgtgtatcacccctcttagtgcaatgctggtgaaagctgct 26601

                                                                         
Query: 309   gatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgtctctgcaacgct 368
             ||||||||| |||| ||| || ||||| ||||| ||||| ||||| ||||| |||||  |
Sbjct: 26602 gatgggccttgccaagcatgactcccaacggtcactctctggcatcgtctccgcaacaat 26661

                                                                         
Query: 369   gtagacacccttgtagtttgtgaacgcctggtagttgatgacctcaccagatttcgtgat 428
             ||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||
Sbjct: 26662 gtagacacccttggagtttgtgaaggcctggtagttgataacttcaccagatctcgtgat 26721

                               
Query: 429   gcacagaacagcaacctc 446
             ||| || || ||||||||
Sbjct: 26722 gcagaggacggcaacctc 26739



 Score =  170 bits (86), Expect = 4e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                         
Query: 451   ccttcgaggacgtggtcctcggggccgatggcagagtccgcgcagacgtcgcagacgacg 510
             |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 29405 ccttcgaggacgtggtcctcggggccgatggcggcgtccccgcagacgtcgcagacgacg 29464

                                                                         
Query: 511   cggccgcggatctcccccgtccaagcctcggccgccggggccgcggccagcaggaaagcg 570
              |||||||||||||||||||||| ||||||||||||||||||||  ||||||| || |||
Sbjct: 29465 tggccgcggatctcccccgtccacgcctcggccgccggggccgctaccagcagcaaggcg 29524

               
Query: 571   ag 572
             ||
Sbjct: 29525 ag 29526

---

>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0572D06
          Length = 148920

 Score =  250 bits (126), Expect = 5e-63
 Identities = 225/258 (87%)
 Strand = Plus / Plus

                                                                          
Query: 189    gttggcaggcttgtagaggaacgtcttgacgttgtgcgagctccccgactgtttgttgta 248
              ||||||||||||||||||||||||||||||| |||| ||| | || ||  | ||| ||||
Sbjct: 133956 gttggcaggcttgtagaggaacgtcttgacggtgtgagagtttcctgaaggcttgctgta 134015

                                                                          
Query: 249    tgtgaacttgaccccagagtgtgcatcgcccctcctggtgcaatgctggtggaagctgct 308
              ||||||||||||||||||||||| ||| |||||| | |||||||||||||| ||||||||
Sbjct: 134016 tgtgaacttgaccccagagtgtgtatcacccctcttagtgcaatgctggtgaaagctgct 134075

                                                                          
Query: 309    gatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgtctctgcaacgct 368
              ||||||||| |||| ||| || ||||| ||||| ||||| ||||| ||||| |||||  |
Sbjct: 134076 gatgggccttgccaagcatgactcccaacggtcactctctggcatcgtctccgcaacaat 134135

                                                                          
Query: 369    gtagacacccttgtagtttgtgaacgcctggtagttgatgacctcaccagatttcgtgat 428
              ||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||
Sbjct: 134136 gtagacacccttggagtttgtgaaggcctggtagttgataacttcaccagatctcgtgat 134195

                                
Query: 429    gcacagaacagcaacctc 446
              ||| || || ||||||||
Sbjct: 134196 gcagaggacggcaacctc 134213



 Score =  170 bits (86), Expect = 4e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                          
Query: 451    ccttcgaggacgtggtcctcggggccgatggcagagtccgcgcagacgtcgcagacgacg 510
              |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 136879 ccttcgaggacgtggtcctcggggccgatggcggcgtccccgcagacgtcgcagacgacg 136938

                                                                          
Query: 511    cggccgcggatctcccccgtccaagcctcggccgccggggccgcggccagcaggaaagcg 570
               |||||||||||||||||||||| ||||||||||||||||||||  ||||||| || |||
Sbjct: 136939 tggccgcggatctcccccgtccacgcctcggccgccggggccgctaccagcagcaaggcg 136998

                
Query: 571    ag 572
              ||
Sbjct: 136999 ag 137000

---

>ref|NM_124867.2| Arabidopsis thaliana unknown protein AT5G54855 mRNA, complete cds
          Length = 679

 Score =  117 bits (59), Expect = 5e-23
 Identities = 134/159 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gtggaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgt 356
           |||||||||||||||||| || || ||||| |  ||||| || |||||||| ||||||||
Sbjct: 417 gtggaagctgctgatgggtcttgcaaggcaagcgtcccaacgttcgctctctggcattgt 358

                                                                       
Query: 357 ctctgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcacc 416
           |||||||||  |||||||||| ||  |||||||||| || |||||||| |  || || ||
Sbjct: 357 ctctgcaactgtgtagacaccttttgagtttgtgaaagcttggtagttcacaacttctcc 298

                                                  
Query: 417 agatttcgtgatgcacagaacagcaacctcagcgccttc 455
           |||||| || ||||||||||| ||||||||||| |||||
Sbjct: 297 agatttggttatgcacagaaccgcaacctcagctccttc 259

---

>gb|AY093718.1| Arabidopsis thaliana AT1g27100/T7N9_16 mRNA, complete cds
          Length = 441

 Score =  117 bits (59), Expect = 5e-23
 Identities = 134/159 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gtggaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgt 356
           |||||||||||||||||| || || ||||| |  ||||| || |||||||| ||||||||
Sbjct: 315 gtggaagctgctgatgggtcttgcaaggcaagcgtcccaacgttcgctctctggcattgt 256

                                                                       
Query: 357 ctctgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcacc 416
           |||||||||  |||||||||| ||  |||||||||| || |||||||| |  || || ||
Sbjct: 255 ctctgcaactgtgtagacaccttttgagtttgtgaaagcttggtagttcacaacttctcc 196

                                                  
Query: 417 agatttcgtgatgcacagaacagcaacctcagcgccttc 455
           |||||| || ||||||||||| ||||||||||| |||||
Sbjct: 195 agatttggttatgcacagaaccgcaacctcagctccttc 157

---

>gb|AF410270.1|AF410270 Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 636

 Score =  117 bits (59), Expect = 5e-23
 Identities = 134/159 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gtggaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgt 356
           |||||||||||||||||| || || ||||| |  ||||| || |||||||| ||||||||
Sbjct: 374 gtggaagctgctgatgggtcttgcaaggcaagcgtcccaacgttcgctctctggcattgt 315

                                                                       
Query: 357 ctctgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcacc 416
           |||||||||  |||||||||| ||  |||||||||| || |||||||| |  || || ||
Sbjct: 314 ctctgcaactgtgtagacaccttttgagtttgtgaaagcttggtagttcacaacttctcc 255

                                                  
Query: 417 agatttcgtgatgcacagaacagcaacctcagcgccttc 455
           |||||| || ||||||||||| ||||||||||| |||||
Sbjct: 254 agatttggttatgcacagaaccgcaacctcagctccttc 216

---

>dbj|AK118946.1| Arabidopsis thaliana At5g54855 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-L11
          Length = 635

 Score =  117 bits (59), Expect = 5e-23
 Identities = 134/159 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gtggaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgt 356
           |||||||||||||||||| || || ||||| |  ||||| || |||||||| ||||||||
Sbjct: 387 gtggaagctgctgatgggtcttgcaaggcaagcgtcccaacgttcgctctctggcattgt 328

                                                                       
Query: 357 ctctgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcacc 416
           |||||||||  |||||||||| ||  |||||||||| || |||||||| |  || || ||
Sbjct: 327 ctctgcaactgtgtagacaccttttgagtttgtgaaagcttggtagttcacaacttctcc 268

                                                  
Query: 417 agatttcgtgatgcacagaacagcaacctcagcgccttc 455
           |||||| || ||||||||||| ||||||||||| |||||
Sbjct: 267 agatttggttatgcacagaaccgcaacctcagctccttc 229

---

>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8
          Length = 80315

 Score =  113 bits (57), Expect = 8e-22
 Identities = 129/153 (84%)
 Strand = Plus / Minus

                                                                         
Query: 297   gtggaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgt 356
             |||||||||||||||||| || || ||||| |  ||||| || |||||||| ||||||||
Sbjct: 43128 gtggaagctgctgatgggtcttgcaaggcaagcgtcccaacgttcgctctctggcattgt 43069

                                                                         
Query: 357   ctctgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcacc 416
             |||||||||  |||||||||| ||  |||||||||| || |||||||| |  || || ||
Sbjct: 43068 ctctgcaactgtgtagacaccttttgagtttgtgaaagcttggtagttcacaacttctcc 43009

                                              
Query: 417   agatttcgtgatgcacagaacagcaacctcagc 449
             |||||| || ||||||||||| |||||||||||
Sbjct: 43008 agatttggttatgcacagaaccgcaacctcagc 42976

---

>gb|AY088675.1| Arabidopsis thaliana clone 9159 mRNA, complete sequence
          Length = 661

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                       
Query: 297 gtggaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgt 356
           |||||||||||||||||| || || ||||| |  ||||| || |||||||| ||||||||
Sbjct: 417 gtggaagctgctgatgggtcttgcaaggcaagcgtcccaacgttcgctctctggcattgt 358

                                                                       
Query: 357 ctctgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcacc 416
           |||||||||  |||||||||| ||  |||| ||||| || |||||||| |  || || ||
Sbjct: 357 ctctgcaactgtgtagacaccttttgagttagtgaaagcttggtagttcacaacttctcc 298

                                                  
Query: 417 agatttcgtgatgcacagaacagcaacctcagcgccttc 455
           |||||| || ||||||||||| ||||||||||| |||||
Sbjct: 297 agatttggttatgcacagaaccgcaacctcagctccttc 259

---

>emb|BX830033.1|CNS0A053 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB54ZF04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1507

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 123/150 (82%)
 Strand = Plus / Minus

                                                                        
Query: 300  gaagctgctgatgggcctcgccaggcacgaatcccatcggtcgctctcaggcattgtctc 359
            ||||||||||||||| || || ||| | |  ||||| || |||||||| |||||||||||
Sbjct: 1283 gaagctgctgatgggtcttgcaagggaagcgtcccaacgttcgctctctggcattgtctc 1224

                                                                        
Query: 360  tgcaacgctgtagacacccttgtagtttgtgaacgcctggtagttgatgacctcaccaga 419
            ||||||  | |||||||| ||  ||||||| || || |||||||| |  || || |||||
Sbjct: 1223 tgcaactgtttagacaccttttgagtttgtaaaagcttggtagttcacaacttctccaga 1164

                                          
Query: 420  tttcgtgatgcacagaacagcaacctcagc 449
            ||| || ||||||||||| |||||||||||
Sbjct: 1163 tttggttatgcacagaaccgcaacctcagc 1134

---

>gb|AY364845.1| Virus PhiCh1 pBgB51 capsid protein, int1, and capsid protein genes,
            complete cds
          Length = 5995

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 498  gtcgcagacgacgcggccgcg 518
            |||||||||||||||||||||
Sbjct: 5742 gtcgcagacgacgcggccgcg 5722

---

>gb|AY364843.1| Virus PhiCh1 pBgB5 ORF34-5, integrase, and ORF36-5 genes, complete
            cds
          Length = 5995

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 498  gtcgcagacgacgcggccgcg 518
            |||||||||||||||||||||
Sbjct: 5742 gtcgcagacgacgcggccgcg 5722

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 490      gcgcagacgtcgcagacgacgcggc 514
                ||||||||| |||||||||||||||
Sbjct: 11359237 gcgcagacggcgcagacgacgcggc 11359213



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 491     cgcagacgtcgcagacgacgcggc 514
               |||||||| |||||||||||||||
Sbjct: 8951904 cgcagacggcgcagacgacgcggc 8951927

---

>gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, complete sequence
          Length = 186318

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 665   gggtagagcttggtgactttt 685
             |||||||||||||||||||||
Sbjct: 38055 gggtagagcttggtgactttt 38035

---

>gb|AF440695.1| Virus PhiCh1, complete genome
          Length = 58498

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 498   gtcgcagacgacgcggccgcg 518
             |||||||||||||||||||||
Sbjct: 27049 gtcgcagacgacgcggccgcg 27029

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 490      gcgcagacgtcgcagacgacgcggc 514
                ||||||||| |||||||||||||||
Sbjct: 11356000 gcgcagacggcgcagacgacgcggc 11355976



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 491     cgcagacgtcgcagacgacgcggc 514
               |||||||| |||||||||||||||
Sbjct: 8949739 cgcagacggcgcagacgacgcggc 8949762

---

>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0005J15, complete sequence
          Length = 159270

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 490   gcgcagacgtcgcagacgacgcggc 514
             ||||||||| |||||||||||||||
Sbjct: 67534 gcgcagacggcgcagacgacgcggc 67510

---

>gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase gene cluster,
            complete sequence
          Length = 32299

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 543  cgccggggccgcggccagcaggaa 566
            |||| |||||||||||||||||||
Sbjct: 1254 cgcctgggccgcggccagcaggaa 1231

---

>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence
          Length = 155958

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 588    gaggagcagacaccggtgag 607
              ||||||||||||||||||||
Sbjct: 130545 gaggagcagacaccggtgag 130526

---

>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster,
             complete sequence
          Length = 99892

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   cggccgccggggccgcggcc 558
             ||||||||||||||||||||
Sbjct: 60627 cggccgccggggccgcggcc 60608

---

>emb|CR674137.2|CNS0FJ4V Tetraodon nigroviridis full-length cDNA
          Length = 453

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 541 gccgccggggccgcggccagcagg 564
           |||||||||||| |||||||||||
Sbjct: 154 gccgccggggcctcggccagcagg 131

---

>gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, complete sequence
          Length = 108051

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     tattatagtgatttacaata 20
             ||||||||||||||||||||
Sbjct: 68389 tattatagtgatttacaata 68370

---

>emb|Z82188.2|HS151B14 Human DNA sequence from clone RP1-151B14 on chromosome 22, complete
             sequence
          Length = 128942

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   aggatggccagatggaggag 590
             ||||||||||||||||||||
Sbjct: 96045 aggatggccagatggaggag 96064

---

>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33
             Contains the PTCH gene for patched homolog, a novel gene,
             the gene for a novel protein similar to a metallothionein
             protein (MT1) and three CpG islands, complete sequence
          Length = 189643

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   ccgccggggccgcggccagc 561
             ||||||||||||||||||||
Sbjct: 53459 ccgccggggccgcggccagc 53478

---

>gb|BC023640.1| Homo sapiens, clone IMAGE:4890344, mRNA
          Length = 1429

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 542  ccgccggggccgcggccagc 561
            ||||||||||||||||||||
Sbjct: 1159 ccgccggggccgcggccagc 1140

---

>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 538    tcggccgccggggccgcggc 557
              ||||||||||||||||||||
Sbjct: 122882 tcggccgccggggccgcggc 122901

---

>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 454    tcgaggacgtggtcctcggggccg 477
              ||||||||| ||||||||||||||
Sbjct: 335430 tcgaggacgaggtcctcggggccg 335453

---

>gb|AE012496.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 404
            of 460 of the complete genome
          Length = 12103

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 542  ccgccggggccgcggccagc 561
            ||||||||||||||||||||
Sbjct: 8703 ccgccggggccgcggccagc 8722

---

>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence
          Length = 176602

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 535   gcctcggccgccggggccgcggcc 558
             ||||||||||||| ||||||||||
Sbjct: 21205 gcctcggccgccgcggccgcggcc 21182

---

>gb|AF196488.2|AF196488 Mycobacterium smegmatis hypothetical protein, complete cds; and
            cydABDC gene cluster, complete sequence
          Length = 7506

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 534  agcctcggccgccggggccgcggc 557
            |||| |||||||||||||||||||
Sbjct: 6557 agccacggccgccggggccgcggc 6534

---

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 443     cctcagcgccttcgaggacg 462
               ||||||||||||||||||||
Sbjct: 4215908 cctcagcgccttcgaggacg 4215927

---

>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0071M09, complete sequence
          Length = 143595

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 491   cgcagacgtcgcagacgacgcggc 514
             |||||||| |||||||||||||||
Sbjct: 76765 cgcagacggcgcagacgacgcggc 76788

---

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 542     ccgccggggccgcggccagc 561
               ||||||||||||||||||||
Sbjct: 4524137 ccgccggggccgcggccagc 4524156

---

>gb|AC022088.5|AC022088 Homo sapiens chromosome 5 clone CTB-110D2, complete sequence
          Length = 108906

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tattatagtgatttacaata 20
             ||||||||||||||||||||
Sbjct: 88768 tattatagtgatttacaata 88787

---

>gb|AC120182.8| Mus musculus chromosome 1, clone RP24-501C2, complete sequence
          Length = 188506

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   atgctggtggaagctgctga 310
             ||||||||||||||||||||
Sbjct: 24868 atgctggtggaagctgctga 24887

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 455     cgaggacgtggtcctcgggg 474
               ||||||||||||||||||||
Sbjct: 1743992 cgaggacgtggtcctcgggg 1743973

---

>gb|AF031418.3| Pseudomonas putida FliK (fliK), FliL, FliM (fliM), FliN (fliN), FliO
            (fliO), FliP (fliP), FliQ (fliQ), FliR (fliR), and FlhB
            (flhB) genes, complete cds; and unknown gene
          Length = 10493

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 539  cggccgccggggccgcggccagca 562
            ||||||||| ||||||||||||||
Sbjct: 4071 cggccgccgaggccgcggccagca 4094

---

>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence
          Length = 202905

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     cttcagtgactgatataggc 63
              ||||||||||||||||||||
Sbjct: 174849 cttcagtgactgatataggc 174868

---

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 494     agacgtcgcagacgacgcggccgcggat 521
               |||||| || ||||||||||||||||||
Sbjct: 2820213 agacgttgccgacgacgcggccgcggat 2820186

---

>gb|AC008572.6|AC008572 Homo sapiens chromosome 5 clone CTC-551A13, complete sequence
          Length = 170529

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   gcacagaacagcaacctcag 448
             ||||||||||||||||||||
Sbjct: 74403 gcacagaacagcaacctcag 74384

---

>gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, complete sequence
          Length = 248543

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    atgctggtggaagctgctga 310
              ||||||||||||||||||||
Sbjct: 216608 atgctggtggaagctgctga 216627

---

>gb|M63676.1|SERERYAA Saccharopolyspora erythraea EryA (eryA) gene, complete cds
          Length = 11219

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 543  cgccggggccgcggccagcaggaa 566
            |||| |||||||||||||||||||
Sbjct: 1841 cgcctgggccgcggccagcaggaa 1818

---

>gb|AC142191.5| Mus musculus BAC clone RP24-530N5 from 6, complete sequence
          Length = 197971

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 662    agagggtagagcttggtgactttt 685
              |||||||||||||||| |||||||
Sbjct: 148581 agagggtagagcttggggactttt 148558

---

>emb|AL512361.3|CNS07EFA Human chromosome 14 DNA sequence BAC R-326E7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158305

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tacaataattacacattcaa 33
             ||||||||||||||||||||
Sbjct: 98306 tacaataattacacattcaa 98287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,418,583
Number of Sequences: 3902068
Number of extensions: 5418583
Number of successful extensions: 110630
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109972
Number of HSP's gapped (non-prelim): 652
length of query: 700
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 677
effective length of database: 17,143,297,704
effective search space: 11606012545608
effective search space used: 11606012545608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---