ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA... 52 0.002
2ref|XM_632930.1| Dictyostelium discoideum hypothetical protein (... 44 0.60
3gb|AC007239.3| Homo sapiens BAC clone RP11-83A12 from 2, complet... 44 0.60
4emb|Z92777.1|CEC17H1 Caenorhabditis elegans Cosmid C17H1, comple... 44 0.60
5ref|XM_640467.1| Dictyostelium discoideum hypothetical protein (... 42 2.4
6gb|AC157491.12| Mus musculus chromosome 8, clone RP24-289G15, co... 42 2.4
7emb|AJ832111.1| Themira arctica mitochondrial partial coi gene f... 42 2.4
8gb|AF417730.1| Ochlerotatus triseriatus cytochrome c oxidase sub... 42 2.4
9emb|AL583841.16| Human DNA sequence from clone RP11-556L2 on chr... 42 2.4
10emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on ch... 42 2.4
11gb|AF187145.1| Arixyleborus medius cytochrome oxidase I gene, pa... 42 2.4
12gb|AF348838.1| Coloceras laticlypeatus cytochrome oxidase subuni... 42 2.4
13gb|AF278543.1|AF278543 Acalymma blandulum cytochrome oxidase sub... 42 2.4
14gb|AF278652.1|AF278652 Auricotes rotundus cytochrome oxidase sub... 42 2.4
15gb|AF253033.1|AF253033 Aedes mariae isolate mar 2 cytochrome oxi... 42 2.4
16gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643... 42 2.4
17ref|XM_633099.1| Dictyostelium discoideum putative CAM kinase (D... 40 9.4
18ref|XM_633715.1| Dictyostelium discoideum hypothetical protein (... 40 9.4
19gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, com... 40 9.4
20gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome... 40 9.4
21gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 9.4
22gb|BC080087.1| Xenopus laevis MGC84212 protein, mRNA (cDNA clone... 40 9.4
23gb|AF016665.1| Caenorhabditis elegans cosmid C49D10, complete se... 40 9.4
24gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, com... 40 9.4
25gb|AC093349.6| Mus musculus chromosome 19, clone RP23-16C14, com... 40 9.4
26gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete... 40 9.4
27ref|XM_418542.1| PREDICTED: Gallus gallus similar to Myeloid/lym... 40 9.4
28gb|AC068459.9| Mus musculus chromosome 12, clone RP23-158M23, co... 40 9.4
29gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
30gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, comp... 40 9.4
31ref|XM_646855.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.4
32ref|XM_759419.1| Theileria parva strain Muguga chromosome 4 hypo... 40 9.4
33ref|XM_665385.1| Plasmodium berghei strain ANKA hypothetical pro... 40 9.4
34gb|AF016654.1| Caenorhabditis elegans cosmid C17A2, complete seq... 40 9.4
35gb|AC146142.1| Pan troglodytes BAC clone RP43-23M11 from 7, comp... 40 9.4
36emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chro... 40 9.4
37emb|AL157944.24| Human DNA sequence from clone RP5-1126B2 on chr... 40 9.4
38ref|XM_795376.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 9.4
39emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L... 40 9.4
40gb|AC161196.4| Mus musculus chromosome 15, clone RP23-319G15, co... 40 9.4
41gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome... 40 9.4
42gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, comp... 40 9.4
43gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome... 40 9.4
44gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, comp... 40 9.4
45gb|AC079845.31| Mus musculus clone rp23-461a12, complete sequence 40 9.4
46gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, comp... 40 9.4
47gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-9... 40 9.4
48ref|NM_062271.2| Caenorhabditis elegans Nuclear Hormone Receptor... 40 9.4
49gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 9.4
50dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
51gb|AC110921.9| Homo sapiens chromosome 17, clone CTD-2653B5, com... 40 9.4
52gb|AC137674.2| Homo sapiens chromosome 3 clone RP11-348I13, comp... 40 9.4
53dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 9.4
54gb|AF248496.1|AF248496 Mycoplasma hominis CLP-like protein (clpB... 40 9.4
55emb|AL807734.7| Mouse DNA sequence from clone RP23-303N21 on chr... 40 9.4
56gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45... 40 9.4
57gb|AC120547.8| Mus musculus chromosome 8, clone RP23-243L19, com... 40 9.4
58gb|AC079832.18| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 9.4
59gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosom... 40 9.4
60gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome... 40 9.4
61emb|AL355053.4|CNS05TC5 Human chromosome 14 DNA sequence BAC C-2... 40 9.4
62gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
63dbj|AB007026.1| Dictyostelium discoideum DIA-1 mRNA, complete cds 40 9.4 
>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10
          Length = 87503

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 387  tgaaaaagaagatattcaaatatttgttgt 416
            |||||||||||||||||||||||| |||||
Sbjct: 2448 tgaaaaagaagatattcaaatattagttgt 2477
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>ref|XM_632930.1| Dictyostelium discoideum hypothetical protein (DDB0218761), partial
            mRNA
          Length = 3096

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 77   taaatctttaacatcatcaacatcat 102
            |||||| |||||||||||||||||||
Sbjct: 1062 taaatcattaacatcatcaacatcat 1087
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>gb|AC007239.3| Homo sapiens BAC clone RP11-83A12 from 2, complete sequence
          Length = 139391

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 388   gaaaaagaagatattcaaatat 409
             ||||||||||||||||||||||
Sbjct: 17463 gaaaaagaagatattcaaatat 17484
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>emb|Z92777.1|CEC17H1 Caenorhabditis elegans Cosmid C17H1, complete sequence
          Length = 37261

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 484   ttgttcttgctaattgtaactt 505
             ||||||||||||||||||||||
Sbjct: 31243 ttgttcttgctaattgtaactt 31264



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 484   ttgttcttgctaattgtaactt 505
             ||||||||||||||||||||||
Sbjct: 11176 ttgttcttgctaattgtaactt 11197



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 485   tgttcttgctaattgtaactt 505
             |||||||||||||||||||||
Sbjct: 33960 tgttcttgctaattgtaactt 33980
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>ref|XM_640467.1| Dictyostelium discoideum hypothetical protein (DDB0168382), partial
            mRNA
          Length = 8103

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 527  tggattcaatcatcgaattcaaatt 551
            |||||||||||||| ||||||||||
Sbjct: 2422 tggattcaatcatcaaattcaaatt 2446
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>gb|AC157491.12| Mus musculus chromosome 8, clone RP24-289G15, complete sequence
          Length = 168377

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 603   tttcaagtttttgaagttaga 623
             |||||||||||||||||||||
Sbjct: 70116 tttcaagtttttgaagttaga 70136
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>emb|AJ832111.1| Themira arctica mitochondrial partial coi gene for cytochrome oxidase
            subunit I
          Length = 1510

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 478  ctggagttgttcttgctaatt 498
            |||||||||||||||||||||
Sbjct: 1042 ctggagttgttcttgctaatt 1062
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>gb|AF417730.1| Ochlerotatus triseriatus cytochrome c oxidase subunit I (COI) gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 903

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 478 ctggagttgttcttgctaatt 498
           |||||||||||||||||||||
Sbjct: 437 ctggagttgttcttgctaatt 457
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>emb|AL583841.16| Human DNA sequence from clone RP11-556L2 on chromosome 9 Contains part of
              the ROR2 gene for receptor tyrosine kinase-like orphan
              receptor, complete sequence
          Length = 192799

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 451    ttttctgcattttctttaagatgta 475
              ||||||||||||||||||| |||||
Sbjct: 178569 ttttctgcattttctttaatatgta 178545
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>emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on chromosome 9q33.1-34.12
              Contains three novel genes, the 3' end of the LHX2 gene for
              LIM homeobox protein 2 and four CpG islands, complete
              sequence
          Length = 221887

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 139    tgaaggccagttgagttgttggcaa 163
              |||||| ||||||||||||||||||
Sbjct: 135706 tgaaggacagttgagttgttggcaa 135730
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>gb|AF187145.1| Arixyleborus medius cytochrome oxidase I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1179

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 478 ctggagttgttcttgctaatt 498
           |||||||||||||||||||||
Sbjct: 788 ctggagttgttcttgctaatt 808
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>gb|AF348838.1| Coloceras laticlypeatus cytochrome oxidase subunit I gene, partial
           cds; mitochondrial gene for mitochondrial product
          Length = 383

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 478 ctggagttgttcttgctaatt 498
           |||||||||||||||||||||
Sbjct: 341 ctggagttgttcttgctaatt 361
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>gb|AF278543.1|AF278543 Acalymma blandulum cytochrome oxidase subunit I (COI) gene, partial
           cds; and tRNA-Leu gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 1341

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 478 ctggagttgttcttgctaatt 498
           |||||||||||||||||||||
Sbjct: 836 ctggagttgttcttgctaatt 856
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>gb|AF278652.1|AF278652 Auricotes rotundus cytochrome oxidase subunit I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 383

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 478 ctggagttgttcttgctaatt 498
           |||||||||||||||||||||
Sbjct: 341 ctggagttgttcttgctaatt 361
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>gb|AF253033.1|AF253033 Aedes mariae isolate mar 2 cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 763

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 478 ctggagttgttcttgctaatt 498
           |||||||||||||||||||||
Sbjct: 299 ctggagttgttcttgctaatt 319
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>gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4,
             complete sequence
          Length = 256879

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 527   tggattcaatcatcgaattcaaatt 551
             |||||||||||||| ||||||||||
Sbjct: 67329 tggattcaatcatcaaattcaaatt 67353
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>ref|XM_633099.1| Dictyostelium discoideum putative CAM kinase (DDB0216238), partial
           mRNA
          Length = 2148

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  ttaaatctttaacatcatca 95
           ||||||||||||||||||||
Sbjct: 889 ttaaatctttaacatcatca 870
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>ref|XM_633715.1| Dictyostelium discoideum hypothetical protein (DDB0185752), partial
           mRNA
          Length = 4350

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 79  aatctttaacatcatcaacatcat 102
           ||||||||||||||||| ||||||
Sbjct: 944 aatctttaacatcatcaccatcat 967
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>gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, complete sequence
          Length = 192643

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 597    aagtaatttcaagtttttga 616
              ||||||||||||||||||||
Sbjct: 155014 aagtaatttcaagtttttga 154995
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>gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome 12, complete sequence
          Length = 227238

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   aagatattcaaatatttgtt 414
             ||||||||||||||||||||
Sbjct: 96296 aagatattcaaatatttgtt 96315
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 453     ttctgcattttctttaagat 472
               ||||||||||||||||||||
Sbjct: 2923600 ttctgcattttctttaagat 2923619
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>gb|BC080087.1| Xenopus laevis MGC84212 protein, mRNA (cDNA clone MGC:84212
           IMAGE:6954900), complete cds
          Length = 2454

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 cttcactttctgatgaagac 277
           ||||||||||||||||||||
Sbjct: 546 cttcactttctgatgaagac 527
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>gb|AF016665.1| Caenorhabditis elegans cosmid C49D10, complete sequence
          Length = 30093

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 388  gaaaaagaagatattcaaatattt 411
            |||||||||||||||||| |||||
Sbjct: 9067 gaaaaagaagatattcaagtattt 9044
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>gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, complete sequence
          Length = 219617

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 597    aagtaatttcaagtttttga 616
              ||||||||||||||||||||
Sbjct: 113589 aagtaatttcaagtttttga 113570
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>gb|AC093349.6| Mus musculus chromosome 19, clone RP23-16C14, complete sequence
          Length = 227274

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gaaaaagaagatattcaaat 407
              ||||||||||||||||||||
Sbjct: 115149 gaaaaagaagatattcaaat 115130
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>gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete sequence
          Length = 154772

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 532    tcaatcatcgaattcaaattggct 555
              |||||||||||| |||||||||||
Sbjct: 108635 tcaatcatcgaaatcaaattggct 108658
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>ref|XM_418542.1| PREDICTED: Gallus gallus similar to Myeloid/lymphoid or mixed-lineage
             leukemia protein 3 homolog (Histone-lysine
             N-methyltransferase, H3 lysine-4 specific MLL3)
             (Homologous to ALR protein) (LOC420437), mRNA
          Length = 18006

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cagttgagttgttggcaaag 165
             ||||||||||||||||||||
Sbjct: 11946 cagttgagttgttggcaaag 11927
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>gb|AC068459.9| Mus musculus chromosome 12, clone RP23-158M23, complete sequence
          Length = 198494

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    aagtgaaatgcccatattgt 191
              ||||||||||||||||||||
Sbjct: 173887 aagtgaaatgcccatattgt 173868
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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0009C07, complete sequence
          Length = 148731

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 646  aggggtatgcagttttgtca 665
            ||||||||||||||||||||
Sbjct: 9634 aggggtatgcagttttgtca 9653
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>gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, complete cds
          Length = 355200

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   atgttccttggctcatgagc 337
             ||||||||||||||||||||
Sbjct: 17779 atgttccttggctcatgagc 17760
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>ref|XM_646855.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (139.t00012)
            partial mRNA
          Length = 3309

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 387  tgaaaaagaagatattcaaatatt 410
            ||||||||||| ||||||||||||
Sbjct: 3054 tgaaaaagaaggtattcaaatatt 3077
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>ref|XM_759419.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
            (TP04_0875) partial mRNA
          Length = 4878

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 479  tggagttgttcttgctaattgtaa 502
            |||||||||||| |||||||||||
Sbjct: 2393 tggagttgttctggctaattgtaa 2416
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>ref|XM_665385.1| Plasmodium berghei strain ANKA hypothetical protein (PB104357.00.0)
           partial mRNA
          Length = 105

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  tttaacatcatcaacatcat 102
           ||||||||||||||||||||
Sbjct: 36  tttaacatcatcaacatcat 55
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>gb|AF016654.1| Caenorhabditis elegans cosmid C17A2, complete sequence
          Length = 24900

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   gaaaaagaagatattcaaatattt 411
             |||||||||||||||||| |||||
Sbjct: 23974 gaaaaagaagatattcaagtattt 23997
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>gb|AC146142.1| Pan troglodytes BAC clone RP43-23M11 from 7, complete sequence
          Length = 173557

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   ttttctgcattttctttaagatgt 474
             |||||| |||||||||||||||||
Sbjct: 91119 ttttcttcattttctttaagatgt 91142
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>emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chromosome 6, complete
             sequence
          Length = 149849

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   aagatattcaaatatttgtt 414
             ||||||||||||||||||||
Sbjct: 63948 aagatattcaaatatttgtt 63967
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>emb|AL157944.24| Human DNA sequence from clone RP5-1126B2 on chromosome 1p31.1-31.2
             Contains STSs and GSSs, complete sequence
          Length = 154746

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   caaatatttgttgtccactg 422
             ||||||||||||||||||||
Sbjct: 17409 caaatatttgttgtccactg 17428
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>ref|XM_795376.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC587622 (LOC587622), mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  ctctcaacatcatagacggt 127
            ||||||||||||||||||||
Sbjct: 1519 ctctcaacatcatagacggt 1500
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>emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L9 on chromosome 20 Contains the
             5' end of the C20orf23 gene for a novel protein similar to
             KIF1 type and other kinesin-like proteins, the RPLP0P1
             gene for ribosomal protein large P0 pseudogene 1 and a CpG
             island, complete sequence
          Length = 119696

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   aaaaagaagatattcaaata 408
             ||||||||||||||||||||
Sbjct: 15950 aaaaagaagatattcaaata 15969
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>gb|AC161196.4| Mus musculus chromosome 15, clone RP23-319G15, complete sequence
          Length = 177873

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 597   aagtaatttcaagtttttga 616
             ||||||||||||||||||||
Sbjct: 45870 aagtaatttcaagtttttga 45851
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>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence
          Length = 206249

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 288    taacagtgttgctgctcatgatgt 311
              ||||||||||||||||||| ||||
Sbjct: 149148 taacagtgttgctgctcataatgt 149171
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>gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, complete sequence
          Length = 211779

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 586   catatagtgagaagtaattt 605
             ||||||||||||||||||||
Sbjct: 25808 catatagtgagaagtaattt 25789
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>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence
          Length = 209458

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     taacatcatcaacatcatga 104
              ||||||||||||||||||||
Sbjct: 137223 taacatcatcaacatcatga 137204
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>gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, complete sequence
          Length = 102001

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   cacaactttactcctgttcc 235
             ||||||||||||||||||||
Sbjct: 11802 cacaactttactcctgttcc 11821
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>gb|AC079845.31| Mus musculus clone rp23-461a12, complete sequence
          Length = 206117

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    cagttgagttgttggcaaag 165
              ||||||||||||||||||||
Sbjct: 155471 cagttgagttgttggcaaag 155490
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>gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, complete sequence
          Length = 208660

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cacaactttactcctgttcc 235
              ||||||||||||||||||||
Sbjct: 128913 cacaactttactcctgttcc 128932
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>gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-93e11, complete
             sequence
          Length = 119127

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tttaacatcatcaacatcat 102
             ||||||||||||||||||||
Sbjct: 57887 tttaacatcatcaacatcat 57868
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>ref|NM_062271.2| Caenorhabditis elegans Nuclear Hormone Receptor family member
           (nhr-257) (nhr-257) mRNA, complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 gaaaaagaagatattcaaatattt 411
           |||||||||||||||||| |||||
Sbjct: 544 gaaaaagaagatattcaagtattt 567
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 446    ctccgttttctgcattttct 465
              ||||||||||||||||||||
Sbjct: 458821 ctccgttttctgcattttct 458840
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 646      aggggtatgcagttttgtca 665
                ||||||||||||||||||||
Sbjct: 28855341 aggggtatgcagttttgtca 28855360
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>gb|AC110921.9| Homo sapiens chromosome 17, clone CTD-2653B5, complete sequence
          Length = 240058

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    atgagcaaactgatactttg 351
              ||||||||||||||||||||
Sbjct: 155867 atgagcaaactgatactttg 155886
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>gb|AC137674.2| Homo sapiens chromosome 3 clone RP11-348I13, complete sequence
          Length = 182649

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gaaagcactgaaaaagaaga 398
              ||||||||||||||||||||
Sbjct: 128345 gaaagcactgaaaaagaaga 128364
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 389     aaaaagaagatattcaaata 408
               ||||||||||||||||||||
Sbjct: 1841115 aaaaagaagatattcaaata 1841134
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>gb|AF248496.1|AF248496 Mycoplasma hominis CLP-like protein (clpB) gene, partial cds
          Length = 894

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 388 gaaaaagaagatattcaaatattt 411
           ||||||||||||||||||| ||||
Sbjct: 448 gaaaaagaagatattcaaaaattt 471
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>emb|AL807734.7| Mouse DNA sequence from clone RP23-303N21 on chromosome X, complete
             sequence
          Length = 184303

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 570   tatctttcagtaggggcatatagt 593
             |||||||| |||||||||||||||
Sbjct: 70333 tatctttctgtaggggcatatagt 70310
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>gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45 of 83 of the complete
             sequence
          Length = 246231

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 532   tcaatcatcgaattcaaattggct 555
             |||||||||||| |||||||||||
Sbjct: 77712 tcaatcatcgaaatcaaattggct 77689
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>gb|AC120547.8| Mus musculus chromosome 8, clone RP23-243L19, complete sequence
          Length = 170147

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 586   catatagtgagaagtaattt 605
             ||||||||||||||||||||
Sbjct: 80737 catatagtgagaagtaattt 80756
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>gb|AC079832.18| Mus musculus strain C57BL/6J chromosome 3 clone rp23-393j8, complete
              sequence
          Length = 194354

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    cagttgagttgttggcaaag 165
              ||||||||||||||||||||
Sbjct: 155303 cagttgagttgttggcaaag 155322
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>gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosome 13, complete
             sequence
          Length = 181988

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   taacagtgttgctgctcatgatgt 311
             ||||||||||||||||||| ||||
Sbjct: 42129 taacagtgttgctgctcataatgt 42152
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>gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome 12, complete sequence
          Length = 236362

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    aagtgaaatgcccatattgt 191
              ||||||||||||||||||||
Sbjct: 202660 aagtgaaatgcccatattgt 202679
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>emb|AL355053.4|CNS05TC5 Human chromosome 14 DNA sequence BAC C-2305P23 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 125977

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   atgttccttggctcatgagc 337
             ||||||||||||||||||||
Sbjct: 43088 atgttccttggctcatgagc 43069
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>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 646   aggggtatgcagttttgtca 665
             ||||||||||||||||||||
Sbjct: 18127 aggggtatgcagttttgtca 18108
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>dbj|AB007026.1| Dictyostelium discoideum DIA-1 mRNA, complete cds
          Length = 1409

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 86   aacatcatcaacatcatgagatct 109
            ||||||||||||||||| ||||||
Sbjct: 1123 aacatcatcaacatcatcagatct 1146


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,068,033
Number of Sequences: 3902068
Number of extensions: 7068033
Number of successful extensions: 152686
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152391
Number of HSP's gapped (non-prelim): 295
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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