ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal13b17 |
|---|---|
| Clone Library Name | barley_pub |
>GUAD_BACSU (O34598) Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase)| (Guanine aminohydrolase) (GAH) (GDEase) Length = 156 Score = 104 bits (260), Expect = 1e-22 Identities = 47/83 (56%), Positives = 60/83 (72%) Frame = -3 Query: 528 GHGGPFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASC 349 G GGPFGAV+V++ +I N V + DPTAHAEVTAIR+ACK LG +L DC +Y SC Sbjct: 21 GIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSC 80 Query: 348 EPCPMCFGAVHLSRIKRLVYGAK 280 EPCPMC GA++ +R K + Y A+ Sbjct: 81 EPCPMCLGAIYWARPKAVFYAAE 103
>TADA_AQUAE (O67050) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 151 Score = 81.6 bits (200), Expect = 1e-15 Identities = 37/78 (47%), Positives = 53/78 (67%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GA++V+ E+I HN V DPTAHAE+ AI+EAC++L L CE+Y + EPC Sbjct: 24 PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVTLEPCI 83 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC A+ LSRI+++++ A Sbjct: 84 MCSYALVLSRIEKVIFSA 101
>YAAJ_BACSU (P21335) Hypothetical protein yaaJ| Length = 161 Score = 79.0 bits (193), Expect = 8e-15 Identities = 38/78 (48%), Positives = 49/78 (62%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N E+I HN+ AHAE+ I EACK LG L +Y + EPCP Sbjct: 25 PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDEACKALGTWRLEGATLYVTLEPCP 84 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GAV LSR++++V+GA Sbjct: 85 MCAGAVVLSRVEKVVFGA 102
>Y236_BUCBP (Q89AM8) Hypothetical protein bbp_236| Length = 162 Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/79 (48%), Positives = 49/79 (62%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N+ +I N + N DPTAHAE+ A+R K L L +Y + EPC Sbjct: 26 PVGAVLVFNNTIIGKGLNSSILNHDPTAHAEIKALRNGAKFLKNYRLLHTTLYVTLEPCI 85 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC+GA+ SRI RLV+GAK Sbjct: 86 MCYGAIIHSRISRLVFGAK 104
>Y255_BUCAI (P57343) Hypothetical protein BU255| Length = 161 Score = 71.6 bits (174), Expect = 1e-12 Identities = 35/78 (44%), Positives = 50/78 (64%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GA++V + +I N ++ DPTAHAE+ A+R A KK+ L + +Y + +PC Sbjct: 27 PIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGAGKKIKNYRLLNTTLYVTLQPCI 86 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GA+ SRIKRLV+GA Sbjct: 87 MCCGAIIQSRIKRLVFGA 104
>Y246_BUCAP (Q8K9R4) Hypothetical protein BUsg246| Length = 151 Score = 71.6 bits (174), Expect = 1e-12 Identities = 34/78 (43%), Positives = 51/78 (65%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GA++V +++I N V++ D TAHAE+ A+REA + + L + +Y + +PC Sbjct: 27 PIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALREAGRNIKNYRLVNTTLYVTLQPCM 86 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GA+ SRIKRLV+GA Sbjct: 87 MCCGAIINSRIKRLVFGA 104
>Y831_RICPR (Q9ZCC6) Hypothetical protein RP831| Length = 148 Score = 71.6 bits (174), Expect = 1e-12 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Frame = -3 Query: 516 PFGAVVV--RNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEP 343 P G V+V N ++IV HN + +P HAE+ AI AC + L+D ++Y + EP Sbjct: 18 PVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINTACNLISSKNLNDYDIYVTLEP 77 Query: 342 CPMCFGAVHLSRIKRLVYGA 283 C MC A+ SR+KRL YGA Sbjct: 78 CAMCASAISHSRLKRLFYGA 97
>TILS_DEIRA (Q9RV23) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 582 Score = 70.9 bits (172), Expect = 2e-12 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGC-HNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPC 340 P GAVV+ D IVG N + D T HAE+ A+REA LG LSDC + + EPC Sbjct: 425 PVGAVVLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVVTLEPC 484 Query: 339 PMCFGAVHLSRIKRLVYGA 283 PMC GA +RI +VYGA Sbjct: 485 PMCLGAALEARIGHIVYGA 503
>TADA_HAEIN (P44931) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 173 Score = 70.1 bits (170), Expect = 4e-12 Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Frame = -3 Query: 516 PFGAVVVRNDEVIVG-CHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPC 340 P GAV+V + I+G N+ + +DPTAHAE+ A+R K + L + +Y + EPC Sbjct: 32 PVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNIQNYRLLNSTLYVTLEPC 91 Query: 339 PMCFGAVHLSRIKRLVYGA 283 MC GA+ SRIKRLV+GA Sbjct: 92 TMCAGAILHSRIKRLVFGA 110
>TADA_SHIFL (P68397) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 178 Score = 68.9 bits (167), Expect = 8e-12 Identities = 35/79 (44%), Positives = 48/79 (60%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N+ VI N + DPTAHAE+ A+R+ + L D +Y + EPC Sbjct: 40 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCV 99 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC GA+ SRI R+V+GA+ Sbjct: 100 MCAGAMIHSRIGRVVFGAR 118
>TADA_ECOLI (P68398) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 178 Score = 68.9 bits (167), Expect = 8e-12 Identities = 35/79 (44%), Positives = 48/79 (60%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N+ VI N + DPTAHAE+ A+R+ + L D +Y + EPC Sbjct: 40 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCV 99 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC GA+ SRI R+V+GA+ Sbjct: 100 MCAGAMIHSRIGRVVFGAR 118
>TADA_ECOL6 (Q8FF24) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 178 Score = 68.9 bits (167), Expect = 8e-12 Identities = 35/79 (44%), Positives = 48/79 (60%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N+ VI N + DPTAHAE+ A+R+ + L D +Y + EPC Sbjct: 40 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCV 99 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC GA+ SRI R+V+GA+ Sbjct: 100 MCAGAMIHSRIGRVVFGAR 118
>TADA_ECO57 (Q8XA44) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 178 Score = 68.9 bits (167), Expect = 8e-12 Identities = 35/79 (44%), Positives = 48/79 (60%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N+ VI N + DPTAHAE+ A+R+ + L D +Y + EPC Sbjct: 40 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCV 99 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC GA+ SRI R+V+GA+ Sbjct: 100 MCAGAMIHSRIGRVVFGAR 118
>TADA_SALTY (Q7CQ08) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 183 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/79 (45%), Positives = 47/79 (59%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N VI N + DPTAHAE+ A+R+ L L D +Y + EPC Sbjct: 40 PVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCV 99 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC GA+ SRI R+V+GA+ Sbjct: 100 MCAGAMVHSRIGRVVFGAR 118
>TADA_SALTI (Q8XGY4) tRNA-specific adenosine deaminase (EC 3.5.4.-)| Length = 183 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/79 (45%), Positives = 47/79 (59%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V N VI N + DPTAHAE+ A+R+ L L D +Y + EPC Sbjct: 40 PVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCV 99 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC GA+ SRI R+V+GA+ Sbjct: 100 MCAGAMVHSRIGRVVFGAR 118
>Y196_STRP8 (Q8P2R7) Hypothetical protein spyM18_0196| Length = 159 Score = 62.8 bits (151), Expect = 6e-10 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P G V+V++ E+I HN + HAE+ AI EA G L D ++ + EPC Sbjct: 29 PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCV 88 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GA+ L+RI ++YGA Sbjct: 89 MCSGAIGLARIPHVIYGA 106
>Y214_STRP6 (Q5XE14) Hypothetical protein M6_Spy0214| Length = 171 Score = 62.8 bits (151), Expect = 6e-10 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P G V+V++ E+I HN + HAE+ AI EA G L D ++ + EPC Sbjct: 29 PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCV 88 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GA+ L+RI ++YGA Sbjct: 89 MCSGAIGLARIPHVIYGA 106
>Y209_STRP1 (P68999) Hypothetical protein SPy0209/M5005_Spy0179| Length = 171 Score = 62.8 bits (151), Expect = 6e-10 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P G V+V++ E+I HN + HAE+ AI EA G L D ++ + EPC Sbjct: 29 PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCV 88 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GA+ L+RI ++YGA Sbjct: 89 MCSGAIGLARIPHVIYGA 106
>Y153_STRP3 (Q8K8Q9) Hypothetical protein SpyM3_0153/SPs0158| Length = 171 Score = 62.8 bits (151), Expect = 6e-10 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P G V+V++ E+I HN + HAE+ AI EA G L D ++ + EPC Sbjct: 29 PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCV 88 Query: 336 MCFGAVHLSRIKRLVYGA 283 MC GA+ L+RI ++YGA Sbjct: 89 MCSGAIGLARIPHVIYGA 106
>FCA1_CANAL (P78594) Cytosine deaminase (EC 3.5.4.1) (Cytosine aminohydrolase)| Length = 150 Score = 52.8 bits (125), Expect = 6e-07 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = -3 Query: 522 GGPFGAVVVRNDEVIVGC-HNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCE 346 G P G+ ++ +D+ ++G HN + H E++A+ A + GK DC +Y + Sbjct: 24 GIPIGSCIISSDDTVLGQGHNERIQKHSAILHGEMSALENAGRLPGKT-YKDCTIYTTLS 82 Query: 345 PCPMCFGAVHLSRIKRLVYG 286 PC MC GA+ L KR+V G Sbjct: 83 PCSMCTGAILLYGFKRVVMG 102
>TILS_THET8 (Q5SI38) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 507 Score = 46.2 bits (108), Expect = 6e-05 Identities = 31/79 (39%), Positives = 43/79 (54%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V V+ HN V DPTAHAE+ +REA E +Y + EPC Sbjct: 393 PVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLREAGP-----EARGGRLYVTLEPCL 446 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC A+ + ++ +VYGA+ Sbjct: 447 MCHHALAQAGVE-VVYGAE 464
>TILS_THET2 (Q72IF6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 507 Score = 46.2 bits (108), Expect = 6e-05 Identities = 31/79 (39%), Positives = 43/79 (54%) Frame = -3 Query: 516 PFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCP 337 P GAV+V V+ HN V DPTAHAE+ +REA E +Y + EPC Sbjct: 393 PVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLREAGP-----EARGGRLYVTLEPCL 446 Query: 336 MCFGAVHLSRIKRLVYGAK 280 MC A+ + ++ +VYGA+ Sbjct: 447 MCHHALAQAGVE-VVYGAE 464
>FCY1_YEAST (Q12178) Cytosine deaminase (EC 3.5.4.1) (Cytosine aminohydrolase)| Length = 158 Score = 45.4 bits (106), Expect = 1e-04 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = -3 Query: 522 GGPFGAVVVRNDE--VIVGCHNMVLNNTDPTAHAEVTAIREACKKLGKIELSDCEMYASC 349 G P G ++ N + V+ HNM T H E++ + + GK+ D +Y + Sbjct: 30 GVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGKV-YKDTTLYTTL 88 Query: 348 EPCPMCFGAVHLSRIKRLVYG 286 PC MC GA+ + I R V G Sbjct: 89 SPCDMCTGAIIMYGIPRCVVG 109
>DCTD_BPT4 (P16006) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)| (dCD) Length = 193 Score = 37.4 bits (85), Expect = 0.026 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -3 Query: 432 HAEVTAIREACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVY 289 HAE+ AI A + IE MY + PCP C A+ S IK+LVY Sbjct: 104 HAELNAILFAARNGSSIE--GATMYVTLSPCPDCAKAIAQSGIKKLVY 149
>DCTD_BPT2 (P00814) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)| Length = 188 Score = 37.4 bits (85), Expect = 0.026 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -3 Query: 432 HAEVTAIREACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVY 289 HAE+ AI A + IE MY + PCP C A+ S IK+LVY Sbjct: 104 HAELNAILFAARNGSSIE--GATMYVTLSPCPDCAKAIAQSGIKKLVY 149
>TAD3_YEAST (Q9URQ3) tRNA-specific adenosine deaminase 3 (EC 3.5.4.-)| (tRNA-specific adenosine-34 deaminase subunit TAD3) Length = 322 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%) Frame = -3 Query: 495 RNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKKL--------GKIELSDCEMYASCEPC 340 R + +V N+ P H+ + IR ++L D ++Y + EPC Sbjct: 195 RKKDKVVAEDGRNCENSLPIDHSVMVGIRAVGERLREGVDEDANSYLCLDYDVYLTHEPC 254 Query: 339 PMCFGAVHLSRIKRLVY 289 MC A+ SR++R+V+ Sbjct: 255 SMCSMALIHSRVRRVVF 271
>TAD2_YEAST (P47058) tRNA-specific adenosine deaminase 2 (EC 3.5.4.-)| (tRNA-specific adenosine-34 deaminase subunit TAD2) Length = 250 Score = 30.4 bits (67), Expect = 3.2 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -3 Query: 435 AHAEVTAIREACKKLGKIEL----SDCEMYASCEPCPMCFGAVHLSRIKRLVYG 286 AHAE I + LG + D +Y + EPC MC A+ I ++V+G Sbjct: 53 AHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFG 106
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.0 bits (66), Expect = 4.1 Identities = 27/91 (29%), Positives = 41/91 (45%) Frame = +2 Query: 236 SAMKSSNPMAIAASALAPYTSLLIRDR*TAPKHIGQGSHDAYISQSDSSIFPSFLQASLI 415 S+ SS+ + AAS A +SL + S + + S+S+ S +SL Sbjct: 174 SSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLN 233 Query: 416 AVTSACAVGSVLFRTMLWQPTITSSLRTTTA 508 + TSA A S + T+ +TSS TT A Sbjct: 234 STTSATATSSSISSTVSSSTPLTSSNSTTAA 264 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,992,418 Number of Sequences: 219361 Number of extensions: 1464106 Number of successful extensions: 3689 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3683 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
