>S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 475

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = -3

Query: 573 PEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPAL 412
           PE F  E +V + +RT++V  T V+A L+P   LV++L+GS+ S  +A+I+P L
Sbjct: 366 PEHF--ELMVDLCVRTAMVCVTCVLAILIPRLDLVISLVGSVSSSALALIIPPL 417

>S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 476

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/48 (41%), Positives = 33/48 (68%)
 Frame = -3

Query: 555 ETIVSIILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPAL 412
           E +V + +RT LV  T ++A L+P   LV++L+GS+ S  +A+I+P L
Sbjct: 371 ELVVDLFVRTVLVCLTCILAILIPRLDLVISLVGSVSSSALALIIPPL 418

>S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
           (Lysosomal amino acid transporter 1) (LYAAT-1) (Neutral
           amino acid/proton symporter)
          Length = 475

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = -3

Query: 573 PEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPAL 412
           PE F  E +V +  RT++V  T V+A L+P   LV++L+GS+ S  +A+I+P L
Sbjct: 366 PERF--ELVVDLSARTAMVCVTCVLAVLIPRLDLVISLVGSVSSSALALIIPPL 417

>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (rGVAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = -3

Query: 540 IILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPALCFLKIAQNK 385
           + LR +LV  T+++A  +P F L+M L GSL    +  ++P+L  L++   K
Sbjct: 433 LTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRK 484

>VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (mVIAAT) (mVGAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = -3

Query: 540 IILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPALCFLKIAQNK 385
           + LR +LV  T+++A  +P F L+M L GSL    +  ++P+L  L++   K
Sbjct: 433 LTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRK 484

>VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (Solute carrier family 32 member 1)
          Length = 525

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = -3

Query: 540 IILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPALCFLKIAQNK 385
           + LR +LV  T+++A  +P F L+M L GSL    +  ++P+L  L++   K
Sbjct: 433 LTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRK 484

>VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (hVIAAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = -3

Query: 540 IILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPALCFLKIAQNK 385
           + LR +LV  T+++A  +P F L+M L GSL    +  ++P+L  L++   K
Sbjct: 433 LTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRK 484

>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)|
           (MtLAX3)
          Length = 465

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVI-----AFLLPFF 478
           +I+ F  F     PL    E+     FL       +L+ +LV   VVI     A + PFF
Sbjct: 312 LIHQFITFGFACTPLYFVWEK-----FLGVHETKSLLKRALVRLPVVIPIWFLAIIFPFF 366

Query: 477 GLVMALIGSLLSILVAVIMPALCFL 403
           G + + +GSLL      I+PAL  +
Sbjct: 367 GPINSTVGSLLVSFTVYIIPALAHM 391

>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)|
          Length = 488

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E+           +  ++R  +V     +A + PFFG + +
Sbjct: 325 LIHQFITFGFACTPLYFVWEKAIGMHHTKSLCLRALVRLPVVVPIWFLAIIFPFFGPINS 384

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      I+PAL  +   +  + R
Sbjct: 385 AVGALLVTFTVYIIPALAHMLTYRTASAR 413

>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)|
          Length = 483

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 24/89 (26%), Positives = 37/89 (41%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E+L               R  +V     +A + PFFG + +
Sbjct: 313 LIHQFITFGFACTPLYFVWEKLIGMHECRSMCKRAAARLPVVIPIWFLAIIFPFFGPINS 372

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +GSLL      I+PAL  +   ++ A R
Sbjct: 373 TVGSLLVSFTVYIIPALAHIFTFRSSAAR 401

>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 21/89 (23%), Positives = 39/89 (43%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E++          +  ++R  +V     +A + PFFG + +
Sbjct: 319 LIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALVRLPVVIPIWFLAIIFPFFGPINS 378

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      I+PAL  +   +  + R
Sbjct: 379 AVGALLVTFTVYIIPALAHMLTYRTASAR 407

>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)|
          Length = 470

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 22/80 (27%), Positives = 34/80 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E+L             + R  +V     +A + PFFG + +
Sbjct: 317 LIHQFITFGFASTPLYFVWEKLIGVHETKSMFKRAMARLPVVVPIWFLAIIFPFFGPINS 376

Query: 462 LIGSLLSILVAVIMPALCFL 403
            +GSLL      I+PAL  +
Sbjct: 377 AVGSLLVSFTVYIIPALAHM 396

>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E++          +  + R  +V     +A + PFFG + +
Sbjct: 327 LIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPIVVPIWFLAIIFPFFGPINS 386

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      I+PAL  +   +  + R
Sbjct: 387 AVGALLVSFTVYIIPALAHILTYRTASAR 415

>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)|
           (MtLAX5)
          Length = 490

 Score = 33.5 bits (75), Expect = 0.68
 Identities = 22/89 (24%), Positives = 38/89 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E+              ++R  +V     +A + PFFG + +
Sbjct: 315 LIHQFITFGFACTPLYFVWEKTVGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINS 374

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +GSLL      I+PAL  +   ++ + R
Sbjct: 375 TVGSLLVSFTVYIIPALAHIFTFKSSSAR 403

>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2|
          Length = 482

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E+          +   + R  +V     +A + PFFG + +
Sbjct: 318 LIHQFITFGFACTPLYFVWEKAIGMHGTRSVLTRALARLPIVVPIWFLAIIFPFFGPINS 377

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      I+P+L  +   ++ + R
Sbjct: 378 AVGALLVSFTVYIIPSLSHILTYRSASAR 406

>UNC47_CAEEL (P34579) Vesicular GABA transporter (Uncoordinated protein 47)|
           (Protein unc-47)
          Length = 486

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = -3

Query: 543 SIILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPALCFLKIAQ 391
           ++ LR  LV  T+ +A  +P+   +M L+G++   +++ I PAL  L I +
Sbjct: 394 AVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLYIKE 444

>PRIA_BACSU (P94461) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 805

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 27/101 (26%), Positives = 40/101 (39%)
 Frame = -2

Query: 703 QITLNLPKESFASKVALWTTGYQPFHQICLVVKPIGSEFRRVAP*RIFERNNCLYYTEDE 524
           Q  L L K  ++S V     GY P    C     I   + R       +R  C Y   +E
Sbjct: 494 QAVLFLNKRGYSSFVMCRDCGYVPQCPHC----DISMTYHRYG-----QRLKCHYCGHEE 544

Query: 523 PCGINCCHCISSSILRFGDGSDWIPAQYTCGCHNARLVLLE 401
           P    C  C S  I  FG G+  +  + T    +AR++ ++
Sbjct: 545 PVPHTCPECASEHIRFFGTGTQRVEEELTKVLPSARVIRMD 585

>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV|
          Length = 615

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540 IILRTSLVASTVVIAFLLPFFGLVMALIGSLLSILVAVIMPALCFLKIAQNKATRT 373
           IIL   L+A  V  A   P  G ++  +GS+  ++    +PA+ ++K ++   T T
Sbjct: 536 IILNVLLIAVAVGFATFYPNVGSILRYVGSISGLVYVFALPAMVYIKQSEAAGTLT 591

>DCTA_XANCP (Q8P5J5) C4-dicarboxylate transport protein|
          Length = 448

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -3

Query: 639 INPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMAL 460
           INP       +N   +   EL   GFL + I + ++   +  + + + F+   FG+ +AL
Sbjct: 118 INPAELDQSAVNTYVQKSHELSLVGFLMDIIPATLISAFVDGNILQVLFVAVLFGIALAL 177

Query: 459 IGS----LLSILVAVIMP 418
           +G     +LS L A+  P
Sbjct: 178 VGERGRPVLSFLEALTAP 195

>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein|
           1) (Polar auxin transport inhibitor resistant protein 1)
          Length = 485

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 20/89 (22%), Positives = 39/89 (43%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E++          +  + R  +V     +A + PFFG + +
Sbjct: 319 LIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINS 378

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      I+P+L  +   ++ + R
Sbjct: 379 AVGALLVSFTVYIIPSLAHMLTYRSASAR 407

>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3|
          Length = 547

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 22/89 (24%), Positives = 38/89 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E+L               R  +V     +A + PFFG + +
Sbjct: 334 LIHQFITFGFACTPLYFVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPINS 393

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +GSLL      I+P+L ++   ++  +R
Sbjct: 394 AVGSLLVSFTVYIIPSLAYMVTFRSPQSR 422

>ACH91_ONCMY (Q8JFN7) Neuronal acetylcholine receptor protein, alpha-9-I subunit|
           precursor (Nicotinic acetylcholine receptor subunit
           alpha 9-I) (NACHR alpha 9-I)
          Length = 572

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +1

Query: 325 GTDDSDNYYSDACNHLRACGFILCDLQEAQGGHYDSHKYTEQGSNQSHHQTEEWKKK 495
           G     N++S   NHL  C +       A GGH D H Y+ + SNQ+HH       K
Sbjct: 403 GNGHLQNHHSTHQNHLDNCRY-------ANGGHRDDH-YSNR-SNQNHHSNRSQTSK 450

>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)|
           (MtLAX1)
          Length = 479

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 19/89 (21%), Positives = 38/89 (42%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E++          +  + R  +V     +A + PFFG + +
Sbjct: 318 LIHQFITFGFACTPLYFVWEKVIGMHDTKSIFLRALARLPVVIPIWFLAIIFPFFGPINS 377

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      ++PA   +   ++ + R
Sbjct: 378 AVGALLVSFTVYVIPASAHMLTYRSASAR 406

>PEP7_SCHPO (O13786) Vacuolar segregation protein pep7|
          Length = 536

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 367 HLRACGFILCDLQEAQGGHYDSHKYTEQGSNQSHHQTEE--WKKKCNDNS*CHKARPQYN 540
           H R CG+I C+             Y  + S  + + +E   W + C +   C++ RP YN
Sbjct: 157 HCRKCGYIFCNFHSM---------YQIKLSIHATYDSENGFWCRVCRE---CYEGRPGYN 204

Query: 541 RDNCFVQKSFR 573
             N  ++  F+
Sbjct: 205 DSNGLIRSRFQ 215

>DCTA2_RHILO (Q986R8) C4-dicarboxylate transport protein 2|
          Length = 442

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
 Frame = -3

Query: 639 INPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMAL 460
           I+P T  A  +N  A    +    GFL   I   I+        + + F    FG+ +AL
Sbjct: 119 IDPATLDASTVNTYAAKAHDQSVTGFLMNIIPGTIVGAFADGDILQVLFFSVLFGIALAL 178

Query: 459 IGS----LLSILVAVIMPALCFLKIAQNKA 382
           +G     +L+ L A++ P    + +    A
Sbjct: 179 VGDKGAPVLNFLQALMAPMFKLVSVLMKAA 208

>ITR1_SCHPO (Q10286) Myo-inositol transporter 1|
          Length = 575

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 21/85 (24%), Positives = 42/85 (49%)
 Frame = -3

Query: 660 LLCGPRVINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPF 481
           L CG + +   + F  L+   +   E +   GF N T   +I+  +    T+V   ++ F
Sbjct: 341 LACGLQAMQQLSGFNSLMYFSSTIFEVV---GFNNPTATGLIIAATNFVFTIVAFGVIDF 397

Query: 480 FGLVMALIGSLLSILVAVIMPALCF 406
           FG  + L+ ++  ++ A+I+ A+ F
Sbjct: 398 FGRRILLLLTVWGMIAALIVCAVAF 422

>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)|
           (MtLAX2)
          Length = 484

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 19/89 (21%), Positives = 37/89 (41%)
 Frame = -3

Query: 642 VINPFTKFALLLNPLARSLEELRPEGFLNETIVSIILRTSLVASTVVIAFLLPFFGLVMA 463
           +I+ F  F     PL    E++          +  + R  +V     +A + PFFG + +
Sbjct: 319 LIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINS 378

Query: 462 LIGSLLSILVAVIMPALCFLKIAQNKATR 376
            +G+LL      I+P+   +   +  + R
Sbjct: 379 AVGALLVSFTVYIIPSAAHMLTYRKASAR 407

>CYB_SCHPO (P05501) Cytochrome b|
          Length = 387

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
 Frame = -3

Query: 495 FLLPFFGLVMAL-------IGSLLSILVAVIMPALCFLKIAQN 388
           +LLPF+ ++ A+       I  LLSILV +++P L F  I  N
Sbjct: 274 YLLPFYAILRAIPNFQLGVIAMLLSILVLLLLPLLDFSAIRGN 316

>BOI2_YEAST (P39969) Protein BOI2 (Protein BEB1)|
          Length = 1040

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 482  NGRRNAMTTVDATRLVLSIIETIVSFKNPSGRNSSKLRANGFNNKANLVKGLITRGPQSN 661
            N +  A  T+ A+    S  +  +S  N S  N++ + +NGF++   L  GL++ G   N
Sbjct: 951  NNQGQADRTISASTQRTSDEDNTISTPNLSSANNTTIGSNGFSSPFLLASGLLSPGVARN 1010


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,292,023
Number of Sequences: 219361
Number of extensions: 1985446
Number of successful extensions: 5000
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4997
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7422931207
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)