ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104985.1| Zea mays PCO095939 mRNA sequence 137 5e-29
2ref|XM_483606.1| Oryza sativa (japonica cultivar-group), mRNA 121 3e-24
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
7dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
8gb|BT019236.1| Zea mays clone Contig909.F mRNA sequence 115 2e-22
9gb|AY106756.1| Zea mays PCO095940 mRNA sequence 115 2e-22
10ref|NM_124742.3| Arabidopsis thaliana unknown protein AT5G53620 ... 42 2.3
11ref|NM_180853.1| Arabidopsis thaliana unknown protein AT5G53620 ... 42 2.3
12gb|BT008429.1| Arabidopsis thaliana At5g53620 gene, complete cds 42 2.3
13gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, compl... 42 2.3
14gb|AY054602.1| Arabidopsis thaliana Unknown protein (At5g53620; ... 42 2.3
15dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.3
16gb|AC002087.1|HSAC002087 Human BAC clone GS1-113D4 from 5p15.2, ... 42 2.3
17gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, c... 40 9.2
18gb|AF295017.4| Homo sapiens chromosome 8 clone RP11-532M24 map q... 40 9.2
19gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, co... 40 9.2
20gb|AC102734.11| Mus musculus chromosome 6, clone RP24-222N4, com... 40 9.2
21gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome ... 40 9.2
22gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosom... 40 9.2
23gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4... 40 9.2
24emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chr... 40 9.2
25emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 9.2
26emb|AJ576102.1|BAM576102 Bacillus amyloliquefaciens partial geno... 40 9.2
27gb|AC104416.7| Homo sapiens chromosome 8, clone CTD-3015P10, com... 40 9.2
28ref|XM_695069.1| PREDICTED: Danio rerio similar to cyclin fold p... 40 9.2
29gb|AC090922.4| Homo sapiens chromosome 8, clone RP11-532M24, com... 40 9.2
30gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, compl... 40 9.2
31gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 9.2
32gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 40 9.2
33emb|AJ575417.1|BAM575417 Bacillus amyloliquefaciens kdg gene for... 40 9.2
34gb|AC108016.5| Homo sapiens BAC clone RP13-1015A13 from 4, compl... 40 9.2
35gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, comple... 40 9.2
36gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cance... 40 9.2
37gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9... 40 9.2
38emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on ch... 40 9.2
39gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, com... 40 9.2
40emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, co... 40 9.2
41gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p... 40 9.2
42gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3... 40 9.2 
>gb|AY104985.1| Zea mays PCO095939 mRNA sequence
          Length = 928

 Score =  137 bits (69), Expect = 5e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                       
Query: 570 gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
           ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtagcagaaatgatctgctgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 250

                                                    
Query: 630 aaaagctcattgtgactagccacaaaatcatcaagcttccc 670
           || |||||     ||||||||||||||||||||||||||||
Sbjct: 249 aacagctctggacgactagccacaaaatcatcaagcttccc 209



 Score =  123 bits (62), Expect = 8e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                       
Query: 403 agccatttccaggtggcattgaatttgaagatctggaatcaacaacaggccctctctttt 462
           ||||||||||||   | |||| |||||| ||||||||||||||  |||| || |||||||
Sbjct: 470 agccatttccagaaagaattgcatttgatgatctggaatcaactgcagggcccctctttt 411

                                                                       
Query: 463 gccgagtgatgtgtgccacaggagtaacagcaactgaaggcagcaacgatgagtaagaag 522
           |||||||| | ||||||||||||||||||||||| |||||||| || ||||||||||  |
Sbjct: 410 gccgagtgctttgtgccacaggagtaacagcaacagaaggcagtaaggatgagtaagggg 351

                     
Query: 523 cagaagatgc 532
           ||||||||||
Sbjct: 350 cagaagatgc 341
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>ref|XM_483606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3172

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 378  tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 437
            |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 2529 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 2470

                                                                        
Query: 438  gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 497
            |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 2469 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 2410

                 
Query: 498  gaagg 502
            |||||
Sbjct: 2409 gaagg 2405



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                        
Query: 570  gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
            ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 2349 gtagctgaaatgatctgctgtgctccttcccgaaggtgaatgaagtctccttcaatcaca 2290

                                                     
Query: 630  aaaagctcattgtgactagccacaaaatcatcaagcttccc 670
            || |||||    || ||||||||||||||||| ||||||||
Sbjct: 2289 aagagctctggatggctagccacaaaatcatctagcttccc 2249



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 330  gatgaatgcccagctcgaacttcatcagaaaagccattc 368
            ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 2676 gatgactgcccaggtcgaacttcatctgaaaagccattc 2638



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 249
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 2804 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 2745

                  
Query: 250  gtctgg 255
            | ||||
Sbjct: 2744 gcctgg 2739
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                            
Query: 378      tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 437
                |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 27204548 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 27204607

                                                                            
Query: 438      gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 497
                |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 27204608 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 27204667

                     
Query: 498      gaagg 502
                |||||
Sbjct: 27204668 gaagg 27204672



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                            
Query: 570      gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
                ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 27204728 gtagctgaaatgatctgctgtgctccttcccgaaggtgaatgaagtctccttcaatcaca 27204787

                       
Query: 630      aaaagct 636
                || ||||
Sbjct: 27204788 aagagct 27204794



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 330      gatgaatgcccagctcgaacttcatcagaaaagccattc 368
                ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 27204401 gatgactgcccaggtcgaacttcatctgaaaagccattc 27204439



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 645      ctagccacaaaatcatcaagcttccc 670
                ||||||||||||||||| ||||||||
Sbjct: 27204876 ctagccacaaaatcatctagcttccc 27204901
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                          
Query: 378    tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 437
              |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 105581 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 105640

                                                                          
Query: 438    gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 497
              |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 105641 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 105700

                   
Query: 498    gaagg 502
              |||||
Sbjct: 105701 gaagg 105705



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                          
Query: 570    gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
              ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 105761 gtagctgaaatgatctgctgtgctccttcccgaaggtgaatgaagtctccttcaatcaca 105820

                     
Query: 630    aaaagct 636
              || ||||
Sbjct: 105821 aagagct 105827



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 330    gatgaatgcccagctcgaacttcatcagaaaagccattc 368
              ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 105434 gatgactgcccaggtcgaacttcatctgaaaagccattc 105472



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 645    ctagccacaaaatcatcaagcttccc 670
              ||||||||||||||||| ||||||||
Sbjct: 105909 ctagccacaaaatcatctagcttccc 105934
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                         
Query: 378   tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 437
             |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 27751 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 27810

                                                                         
Query: 438   gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 497
             |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 27811 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 27870

                  
Query: 498   gaagg 502
             |||||
Sbjct: 27871 gaagg 27875



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                         
Query: 570   gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
             ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 27931 gtagctgaaatgatctgctgtgctccttcccgaaggtgaatgaagtctccttcaatcaca 27990

                    
Query: 630   aaaagct 636
             || ||||
Sbjct: 27991 aagagct 27997



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 330   gatgaatgcccagctcgaacttcatcagaaaagccattc 368
             ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 27604 gatgactgcccaggtcgaacttcatctgaaaagccattc 27642



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 645   ctagccacaaaatcatcaagcttccc 670
             ||||||||||||||||| ||||||||
Sbjct: 28079 ctagccacaaaatcatctagcttccc 28104
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>dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061H08, full
            insert sequence
          Length = 1855

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 378  tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 437
            |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 1347 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 1288

                                                                        
Query: 438  gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 497
            |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 1287 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 1228

                 
Query: 498  gaagg 502
            |||||
Sbjct: 1227 gaagg 1223



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                        
Query: 570  gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
            ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1167 gtagctgaaatgatctgctgtgctccttcccgaaggtgaatgaagtctccttcaatcaca 1108

                                                     
Query: 630  aaaagctcattgtgactagccacaaaatcatcaagcttccc 670
            || |||||    || ||||||||||||||||| ||||||||
Sbjct: 1107 aagagctctggatggctagccacaaaatcatctagcttccc 1067



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 330  gatgaatgcccagctcgaacttcatcagaaaagccattc 368
            ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 1494 gatgactgcccaggtcgaacttcatctgaaaagccattc 1456



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 249
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 1622 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 1563

                  
Query: 250  gtctgg 255
            | ||||
Sbjct: 1562 gcctgg 1557
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>dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L17, full
            insert sequence
          Length = 3173

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 378  tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 437
            |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 2529 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 2470

                                                                        
Query: 438  gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 497
            |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 2469 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 2410

                 
Query: 498  gaagg 502
            |||||
Sbjct: 2409 gaagg 2405



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                        
Query: 570  gtagccgaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcaca 629
            ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 2349 gtagctgaaatgatctgctgtgctccttcccgaaggtgaatgaagtctccttcaatcaca 2290

                                                     
Query: 630  aaaagctcattgtgactagccacaaaatcatcaagcttccc 670
            || |||||    || ||||||||||||||||| ||||||||
Sbjct: 2289 aagagctctggatggctagccacaaaatcatctagcttccc 2249



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 330  gatgaatgcccagctcgaacttcatcagaaaagccattc 368
            ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 2676 gatgactgcccaggtcgaacttcatctgaaaagccattc 2638



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 190  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 249
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 2804 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 2745

                  
Query: 250  gtctgg 255
            | ||||
Sbjct: 2744 gcctgg 2739
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>gb|BT019236.1| Zea mays clone Contig909.F mRNA sequence
          Length = 1329

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                       
Query: 576 gaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcacaaaaagc 635
           ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 687 gaaataatctgctgtgctccatcacgaaggtgaatgaagtctccctcaatcacaaacagc 746

                                                 
Query: 636 tcattgtgactagccacaaaatcatcaagcttcccgta 673
           ||    ||||||||||||||||| || |||||||||||
Sbjct: 747 tctggatgactagccacaaaatcgtcgagcttcccgta 784



 Score =  107 bits (54), Expect = 5e-20
 Identities = 111/130 (85%)
 Strand = Plus / Plus

                                                                       
Query: 403 agccatttccaggtggcattgaatttgaagatctggaatcaacaacaggccctctctttt 462
           |||| |||||||  || |||| |||||| ||||||||||||||  | ||||  |||||||
Sbjct: 520 agccgtttccagagggaattgcatttgatgatctggaatcaactgcgggcctcctctttt 579

                                                                       
Query: 463 gccgagtgatgtgtgccacaggagtaacagcaactgaaggcagcaacgatgagtaagaag 522
           |||||||  | ||||||||||||||||| ||||| |||||||| || ||||||||||| |
Sbjct: 580 gccgagtattttgtgccacaggagtaacggcaacagaaggcagtaaggatgagtaagagg 639

                     
Query: 523 cagaagatgc 532
           ||||||||||
Sbjct: 640 cagaagatgc 649



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 225 ccctgttgctttcctccataaccatgtctgg 255
           |||||||| ||||| ||||||||||||||||
Sbjct: 321 ccctgttgttttccaccataaccatgtctgg 351
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>gb|AY106756.1| Zea mays PCO095940 mRNA sequence
          Length = 974

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                       
Query: 576 gaaatgatctgttgtgctccttcacgaaggtgaatgaagtctccctcaatcacaaaaagc 635
           ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 210 gaaataatctgctgtgctccatcacgaaggtgaatgaagtctccctcaatcacaaacagc 151

                                                 
Query: 636 tcattgtgactagccacaaaatcatcaagcttcccgta 673
           ||    ||||||||||||||||| || |||||||||||
Sbjct: 150 tctggatgactagccacaaaatcgtcgagcttcccgta 113



 Score =  107 bits (54), Expect = 5e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                       
Query: 403 agccatttccaggtggcattgaatttgaagatctggaatcaacaacaggccctctctttt 462
           |||| |||||||  || |||| |||||| ||||||||||||||  | ||||  |||||||
Sbjct: 377 agccgtttccagagggaattgcatttgatgatctggaatcaactgcgggcctcctctttt 318

                                                                       
Query: 463 gccgagtgatgtgtgccacaggagtaacagcaactgaaggcagcaacgatgagtaagaag 522
           |||||||  | ||||||||||||||||| ||||| |||||||| || ||||||||||| |
Sbjct: 317 gccgagtattttgtgccacaggagtaacggcaacagaaggcagtaaggatgagtaagagg 258

                     
Query: 523 cagaagatgc 532
           ||||||||||
Sbjct: 257 cagaagatgc 248



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 225 ccctgttgctttcctccataaccatgtctgg 255
           |||||||| ||||| ||||||||||||||||
Sbjct: 576 ccctgttgttttccaccataaccatgtctgg 546
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>ref|NM_124742.3| Arabidopsis thaliana unknown protein AT5G53620 transcript variant
            AT5G53620.2 mRNA, complete cds
          Length = 2417

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 645  ctagccacaaaatcatcaagcttcccgta 673
            ||||| ||||||||||| |||||||||||
Sbjct: 2028 ctagcaacaaaatcatccagcttcccgta 2000
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>ref|NM_180853.1| Arabidopsis thaliana unknown protein AT5G53620 transcript variant
            AT5G53620.1 mRNA, complete cds
          Length = 2367

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 645  ctagccacaaaatcatcaagcttcccgta 673
            ||||| ||||||||||| |||||||||||
Sbjct: 1978 ctagcaacaaaatcatccagcttcccgta 1950
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>gb|BT008429.1| Arabidopsis thaliana At5g53620 gene, complete cds
          Length = 2049

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 645  ctagccacaaaatcatcaagcttcccgta 673
            ||||| ||||||||||| |||||||||||
Sbjct: 1811 ctagcaacaaaatcatccagcttcccgta 1783
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>gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, complete sequence
          Length = 172738

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    ttggttttgatctccaaattt 391
              |||||||||||||||||||||
Sbjct: 129791 ttggttttgatctccaaattt 129811
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>gb|AY054602.1| Arabidopsis thaliana Unknown protein (At5g53620; MNC6.16) mRNA,
            complete cds
          Length = 2366

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 645  ctagccacaaaatcatcaagcttcccgta 673
            ||||| ||||||||||| |||||||||||
Sbjct: 1978 ctagcaacaaaatcatccagcttcccgta 1950
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>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 645   ctagccacaaaatcatcaagcttcccgta 673
             ||||| ||||||||||| |||||||||||
Sbjct: 70978 ctagcaacaaaatcatccagcttcccgta 70950
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>gb|AC002087.1|HSAC002087 Human BAC clone GS1-113D4 from 5p15.2, complete sequence
          Length = 154028

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    ttggttttgatctccaaattt 391
              |||||||||||||||||||||
Sbjct: 107539 ttggttttgatctccaaattt 107559
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>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aggcactgttataaaagcaa 53
             ||||||||||||||||||||
Sbjct: 71254 aggcactgttataaaagcaa 71273
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>gb|AF295017.4| Homo sapiens chromosome 8 clone RP11-532M24 map q24.13, complete
             sequence
          Length = 207084

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   atttccaggtggcattgaat 426
             ||||||||||||||||||||
Sbjct: 58900 atttccaggtggcattgaat 58881
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>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence
          Length = 246043

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  acttcatcagaaaagccatt 367
            ||||||||||||||||||||
Sbjct: 6641 acttcatcagaaaagccatt 6660
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>gb|AC102734.11| Mus musculus chromosome 6, clone RP24-222N4, complete sequence
          Length = 238453

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 642    tgactagccacaaaatcatc 661
              ||||||||||||||||||||
Sbjct: 235227 tgactagccacaaaatcatc 235246
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>gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome 6, complete sequence
          Length = 197050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 642    tgactagccacaaaatcatc 661
              ||||||||||||||||||||
Sbjct: 122747 tgactagccacaaaatcatc 122728
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>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     tcttcagccatttgaaacca 107
              ||||||||||||||||||||
Sbjct: 116208 tcttcagccatttgaaacca 116227
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>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgcacaaattttgaataat 75
              ||||||||||||||||||||
Sbjct: 227852 gtgcacaaattttgaataat 227833
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>emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chromosome 13 Contains part
              of the GPC5 gene for glypican 5, complete sequence
          Length = 138781

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 364    cattcacttggttttgatctccaa 387
              |||| |||||||||||||||||||
Sbjct: 100559 cattaacttggttttgatctccaa 100582
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ctctcttttgccgagtgatg 473
              ||||||||||||||||||||
Sbjct: 583056 ctctcttttgccgagtgatg 583037
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>emb|AJ576102.1|BAM576102 Bacillus amyloliquefaciens partial genome, strain FZB42
          Length = 122883

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    tgatctgttgtgctccttca 599
              ||||||||||||||||||||
Sbjct: 113834 tgatctgttgtgctccttca 113853
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>gb|AC104416.7| Homo sapiens chromosome 8, clone CTD-3015P10, complete sequence
          Length = 172029

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 105   ccaaaactcagccaacttgacatg 128
             ||||||||||| ||||||||||||
Sbjct: 34475 ccaaaactcagtcaacttgacatg 34452
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>ref|XM_695069.1| PREDICTED: Danio rerio similar to cyclin fold protein 1
           (LOC571475), partial mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ccaactcgttcatgtcttcc 304
           ||||||||||||||||||||
Sbjct: 286 ccaactcgttcatgtcttcc 267
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>gb|AC090922.4| Homo sapiens chromosome 8, clone RP11-532M24, complete sequence
          Length = 207069

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   atttccaggtggcattgaat 426
             ||||||||||||||||||||
Sbjct: 58904 atttccaggtggcattgaat 58885
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>gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, complete sequence
          Length = 117372

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tcagccaacttgacatgatt 131
             ||||||||||||||||||||
Sbjct: 86544 tcagccaacttgacatgatt 86525
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 97      atttgaaaccaaaactcagccaacttga 124
               |||||||||||||| |||||||| ||||
Sbjct: 1851725 atttgaaaccaaaagtcagccaatttga 1851698
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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    atttgaaaccaaaactcagc 116
             ||||||||||||||||||||
Sbjct: 64354 atttgaaaccaaaactcagc 64373
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>emb|AJ575417.1|BAM575417 Bacillus amyloliquefaciens kdg gene for KdgK protein
          Length = 122883

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    tgatctgttgtgctccttca 599
              ||||||||||||||||||||
Sbjct: 113834 tgatctgttgtgctccttca 113853
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>gb|AC108016.5| Homo sapiens BAC clone RP13-1015A13 from 4, complete sequence
          Length = 162715

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    agcagatcttcagccatttgaaac 105
             ||||||||||||| ||||||||||
Sbjct: 65361 agcagatcttcaggcatttgaaac 65338
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>gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, complete sequence
          Length = 196952

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     caaattttgaataatgaatt 80
              ||||||||||||||||||||
Sbjct: 131376 caaattttgaataatgaatt 131357
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>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tcttcagccatttgaaacca 107
             ||||||||||||||||||||
Sbjct: 63937 tcttcagccatttgaaacca 63956
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>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence
          Length = 160378

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    gttcatgtcttcccccattg 311
              ||||||||||||||||||||
Sbjct: 143912 gttcatgtcttcccccattg 143893
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>emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on chromosome 4, complete
             sequence
          Length = 168795

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 615   tctccctcaatcacaaaaagctcattgt 642
             ||||||||| ||| ||||||||||||||
Sbjct: 23910 tctccctcactcagaaaaagctcattgt 23937
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>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence
          Length = 177482

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    acttcatcagaaaagccatt 367
              ||||||||||||||||||||
Sbjct: 104412 acttcatcagaaaagccatt 104431
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>emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, complete sequence
          Length = 162385

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ttttgaataatgaattcagc 84
              ||||||||||||||||||||
Sbjct: 129191 ttttgaataatgaattcagc 129210
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>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    atttgaaaccaaaactcagc 116
             ||||||||||||||||||||
Sbjct: 20096 atttgaaaccaaaactcagc 20115
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>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    atttgaaaccaaaactcagc 116
             ||||||||||||||||||||
Sbjct: 18454 atttgaaaccaaaactcagc 18435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,268,785
Number of Sequences: 3902068
Number of extensions: 6268785
Number of successful extensions: 114344
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114181
Number of HSP's gapped (non-prelim): 157
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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