ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal12l22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 515 bits (260), Expect = e-143 Identities = 290/300 (96%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gctcagtagtacggctggagcttccagcgctggttgtcgccctcgcaccacttccagagc 553 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 552 acgacctcggtgccgtcgcgcacgccgccgtggtacttgtcgccgttgagggcgtcgaag 493 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 492 ttgaggtagatgttgttcaccatgcgcacgcacctgaacccgttgcccacgtccctgctc 433 Query: 412 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcacaggg 471 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 432 tccgtccacagcaccgactcgtccaggtagtctgggttgtacggcaccagacgcacaggg 373 Query: 472 tgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 || ||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 372 tgtgactggccgagggagtgcttgatggcctgcccggtggccttgttcaccatggcgaag 313 Score = 129 bits (65), Expect = 1e-26 Identities = 132/155 (85%), Gaps = 12/155 (7%) Strand = Plus / Minus Query: 1 tcctttattagtacgtaacttgtgattacacatacaagcacaacggctccgttattctgc 60 ||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 823 tcctttattgttacgtaacttgtcattacacacacaagcacaacagctccgttattctgc 764 Query: 61 ggcgtagggagcgactagcgagagacgcatgcatgttgttcatccgggacagccc----- 115 || ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 763 ggggtagg-------tagcgagagacgcatgcatgttgtctatccgggacggtccacatg 711 Query: 116 acatcgtttcttcagtagatacgtacgtacacatg 150 |||||||||||||||||||||||||||||| |||| Sbjct: 710 acatcgtttcttcagtagatacgtacgtacgcatg 676
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 436 bits (220), Expect = e-119 Identities = 280/300 (93%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 657 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 656 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 597 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 411 |||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| Sbjct: 596 ttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcggctc 537 Query: 412 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcacaggg 471 ||||||||||||||||||||||||| | |||||||||||||||||||| | ||||||| Sbjct: 536 tccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccagcctcacaggg 477 Query: 472 tgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 || |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| Sbjct: 476 tgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagggcgaag 417
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 436 bits (220), Expect = e-119 Identities = 280/300 (93%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 656 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 655 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 596 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 411 |||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| Sbjct: 595 ttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcggctc 536 Query: 412 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcacaggg 471 ||||||||||||||||||||||||| | |||||||||||||||||||| | ||||||| Sbjct: 535 tccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccagcctcacaggg 476 Query: 472 tgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 || |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| Sbjct: 475 tgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagggcgaag 416
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 373 bits (188), Expect = e-100 Identities = 263/288 (91%) Strand = Plus / Minus Query: 234 tcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagcac 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 tcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagcac 380 Query: 294 gacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagtt 353 ||| | ||||||||| |||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 379 gacgttggtgccgtcacggacgccgccgtgccacttgtcgccgtggagggcgtcgaagtt 320 Query: 354 gaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctc 413 ||||||||||||||| |||||||| ||||| | |||||||||||| ||||| | |||||| Sbjct: 319 gaggtagatgttgttgaccatgcggacgcagcggaagccgttgccgacgtcgcggctctc 260 Query: 414 cgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcacagggtg 473 ||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 259 cgtccacagcaccgactcgtccaaaaagtccgggttgtagggcaccaggcgcaccgggtg 200 Query: 474 ggactggccgagggagtgcttgatggcctggccagtggccttgttcac 521 |||||| || || |||||||||||||||| || || ||||||||||| Sbjct: 199 ggactgccccagcgagtgcttgatggcctccccggtcgccttgttcac 152
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 345 bits (174), Expect = 9e-92 Identities = 216/230 (93%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28956093 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 28956034 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 28956033 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 28955974 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 411 |||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| Sbjct: 28955973 ttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcggctc 28955914 Query: 412 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 461 ||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 28955913 tccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccag 28955864 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct: 28940895 ggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgt 28940836 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| Sbjct: 28940835 cgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgt 28940776 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| ||||| | |||||| | ||| |||||| ||||||||||||||||||||| Sbjct: 28940775 tcaccatgcggacgcagcggaagccatggccgacgtccttgctctccgtccacagcaccg 28940716 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 ||||||||||| | ||||||||||| |||||||| Sbjct: 28940715 actcgtccaggtactccgggttgtatggcaccag 28940682 Score = 226 bits (114), Expect = 6e-56 Identities = 189/214 (88%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 28952105 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 28952046 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 28952045 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 28951986 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| ||| ||||||||||||||||||| | Sbjct: 28951985 tcaccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacag 28951926 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | || |||||||| || ||||| Sbjct: 28951925 actcgtcctggtactctgggttgtagggaaccag 28951892 Score = 218 bits (110), Expect = 1e-53 Identities = 188/214 (87%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 28939893 ggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 28939834 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | |||||||||||| |||||||||||| || |||||| ||||||||||||||||||| Sbjct: 28939833 cgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgt 28939774 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| | ||| |||||| ||||||| ||||||||||||| Sbjct: 28939773 tgaccatgcggatgcagcggaagccatggccgacgtccttgctctcggtccacagcaccg 28939714 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | || ||||||||||||||||| Sbjct: 28939713 actcgtcctggtactctgggttgtacggcaccag 28939680 Score = 204 bits (103), Expect = 2e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 28951418 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 28951359 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 28951358 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 28951299 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 28951298 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 28951239 Query: 428 actcgtccaggaagtccgggttgtacggcac 458 || ||||| | | ||||||||| ||||||| Sbjct: 28951238 acgcgtcctcgtactccgggttgaacggcac 28951208 Score = 99.6 bits (50), Expect = 9e-18 Identities = 62/66 (93%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 525 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 28955777 acagggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagg 28955718 Query: 526 gcgaag 531 |||||| Sbjct: 28955717 gcgaag 28955712 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 469 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 528 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 28951090 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 28951031 Query: 529 aa 530 || Sbjct: 28951030 aa 28951029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcac 521 ||||||||| ||| |||||||||||||||||||| | || |||||||||||||| Sbjct: 28940462 acagggtggctctgtccgagggagtgcttgatggcttccccggtggccttgttcac 28940407
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 345 bits (174), Expect = 9e-92 Identities = 216/230 (93%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73630 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 73571 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 73570 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 73511 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 411 |||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| Sbjct: 73510 ttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcggctc 73451 Query: 412 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 461 ||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 73450 tccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccag 73401 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct: 58432 ggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgt 58373 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| Sbjct: 58372 cgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgt 58313 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| ||||| | |||||| | ||| |||||| ||||||||||||||||||||| Sbjct: 58312 tcaccatgcggacgcagcggaagccatggccgacgtccttgctctccgtccacagcaccg 58253 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 ||||||||||| | ||||||||||| |||||||| Sbjct: 58252 actcgtccaggtactccgggttgtatggcaccag 58219 Score = 226 bits (114), Expect = 6e-56 Identities = 189/214 (88%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 69642 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 69583 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 69582 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 69523 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| ||| ||||||||||||||||||| | Sbjct: 69522 tcaccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacag 69463 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | || |||||||| || ||||| Sbjct: 69462 actcgtcctggtactctgggttgtagggaaccag 69429 Score = 218 bits (110), Expect = 1e-53 Identities = 188/214 (87%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 57430 ggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 57371 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | |||||||||||| |||||||||||| || |||||| ||||||||||||||||||| Sbjct: 57370 cgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgt 57311 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| | ||| |||||| ||||||| ||||||||||||| Sbjct: 57310 tgaccatgcggatgcagcggaagccatggccgacgtccttgctctcggtccacagcaccg 57251 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | || ||||||||||||||||| Sbjct: 57250 actcgtcctggtactctgggttgtacggcaccag 57217 Score = 204 bits (103), Expect = 2e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 68955 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 68896 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 68895 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 68836 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 68835 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 68776 Query: 428 actcgtccaggaagtccgggttgtacggcac 458 || ||||| | | ||||||||| ||||||| Sbjct: 68775 acgcgtcctcgtactccgggttgaacggcac 68745 Score = 99.6 bits (50), Expect = 9e-18 Identities = 62/66 (93%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 525 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 73314 acagggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagg 73255 Query: 526 gcgaag 531 |||||| Sbjct: 73254 gcgaag 73249 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 469 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 528 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 68627 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 68568 Query: 529 aa 530 || Sbjct: 68567 aa 68566 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcac 521 ||||||||| ||| |||||||||||||||||||| | || |||||||||||||| Sbjct: 57999 acagggtggctctgtccgagggagtgcttgatggcttccccggtggccttgttcac 57944
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 345 bits (174), Expect = 9e-92 Identities = 216/230 (93%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 1274 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1273 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 1214 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 411 |||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| Sbjct: 1213 ttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcggctc 1154 Query: 412 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 461 ||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1153 tccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccag 1104 Score = 99.6 bits (50), Expect = 9e-18 Identities = 62/66 (93%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 525 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 1017 acagggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagg 958 Query: 526 gcgaag 531 |||||| Sbjct: 957 gcgaag 952
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 283 bits (143), Expect = 3e-73 Identities = 248/283 (87%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1035 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 976 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 975 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 916 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 ||||||||| | ||| | |||||||| || ||||| | ||||||||||||||||||||| Sbjct: 915 caccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcaccga 856 Query: 429 ctcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggga 488 ||||||| || | | ||||||||||||||||| |||||||||| | ||| |||| Sbjct: 855 ctcgtcctggtatccggggttgtacggcaccagcttcacagggtggccttcgccttggga 796 Query: 489 gtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 |||||||||||||| ||| ||| || |||| |||| ||||||| Sbjct: 795 gtgcttgatggcctcgccggtgaccctgttgacgagggcgaag 753 Score = 222 bits (112), Expect = 9e-55 Identities = 235/276 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 529 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 470 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 469 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 410 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 ||| |||||| | ||| | ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 409 tcagcatgcggatgcagcggaagctcttgcccacgtcgccgctctccgtccacagcaccg 350 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | ||||||||| ||||| |||| ||| |||||| ||||||||||| Sbjct: 349 actcgtccgggtactccgggttgaacggcgccagcttcaccgggtggccctggccgaggg 290 Query: 488 agtgcttgatggcctggccagtggccttgttcacga 523 ||||||||||||| |||| ||||||||||| |||| Sbjct: 289 agtgcttgatggcgaggccggtggccttgttgacga 254
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 283 bits (143), Expect = 3e-73 Identities = 248/283 (87%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1097 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 1038 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1037 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 978 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 ||||||||| | ||| | |||||||| || ||||| | ||||||||||||||||||||| Sbjct: 977 caccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcaccga 918 Query: 429 ctcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggga 488 ||||||| || | | ||||||||||||||||| |||||||||| | ||| |||| Sbjct: 917 ctcgtcctggtatccggggttgtacggcaccagcttcacagggtggccttcgccttggga 858 Query: 489 gtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 |||||||||||||| ||| ||| || |||| |||| ||||||| Sbjct: 857 gtgcttgatggcctcgccggtgaccctgttgacgagggcgaag 815 Score = 222 bits (112), Expect = 9e-55 Identities = 235/276 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 591 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 532 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 531 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 472 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 ||| |||||| | ||| | ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 471 tcagcatgcgaatgcagcggaagctcttgcccacgtcgccgctctccgtccacagcaccg 412 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | ||||||||| ||||| |||| ||| |||||| ||||||||||| Sbjct: 411 actcgtccgggtactccgggttgaacggcgccagcttcaccgggtggccctggccgaggg 352 Query: 488 agtgcttgatggcctggccagtggccttgttcacga 523 ||||||||||||| |||| ||||||||||| |||| Sbjct: 351 agtgcttgatggcgaggccggtggccttgttgacga 316
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 283 bits (143), Expect = 3e-73 Identities = 248/283 (87%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1110 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 1051 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1050 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 991 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 ||||||||| | ||| | |||||||| || ||||| | ||||||||||||||||||||| Sbjct: 990 caccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcaccga 931 Query: 429 ctcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggga 488 ||||||| || | | ||||||||||||||||| |||||||||| | ||| |||| Sbjct: 930 ctcgtcctggtatccggggttgtacggcaccagcttcacagggtggccttcgccttggga 871 Query: 489 gtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 |||||||||||||| ||| ||| || |||| |||| ||||||| Sbjct: 870 gtgcttgatggcctcgccggtgaccctgttgacgagggcgaag 828 Score = 222 bits (112), Expect = 9e-55 Identities = 235/276 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 604 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 545 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 544 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 485 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 ||| |||||| | ||| | ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 484 tcagcatgcggatgcagcggaagctcttgcccacgtcgccgctctccgtccacagcaccg 425 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | ||||||||| ||||| |||| ||| |||||| ||||||||||| Sbjct: 424 actcgtccgggtactccgggttgaacggcgccagcttcaccgggtggccctggccgaggg 365 Query: 488 agtgcttgatggcctggccagtggccttgttcacga 523 ||||||||||||| |||| ||||||||||| |||| Sbjct: 364 agtgcttgatggcgaggccggtggccttgttgacga 329
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 268 bits (135), Expect = 2e-68 Identities = 242/277 (87%), Gaps = 3/277 (1%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct: 1192 ggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgt 1133 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| Sbjct: 1132 cgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgt 1073 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| ||||| | |||||| | ||| |||||| ||||||||||||||||||||| Sbjct: 1072 tcaccatgcggacgcagcggaagccatggccgacgtccttgctctccgtccacagcaccg 1013 Query: 428 actcgtccaggaagtccgggttgtacggcaccag---acgcacagggtgggactggccga 484 ||||||||||| | ||||||||||| |||||||| | ||||||||| ||| |||| Sbjct: 1012 actcgtccaggtactccgggttgtatggcaccagcctaactacagggtggctctgtccga 953 Query: 485 gggagtgcttgatggcctggccagtggccttgttcac 521 |||||||||||||||| | || |||||||||||||| Sbjct: 952 gggagtgcttgatggcttccccggtggccttgttcac 916 Score = 232 bits (117), Expect = 9e-58 Identities = 217/249 (87%), Gaps = 1/249 (0%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 504 ggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 445 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | |||||||||||| |||||||||||| || |||||| ||||||||||||||||||| Sbjct: 444 cgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgt 385 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| | ||| |||||| ||||||| ||||||||||||| Sbjct: 384 tgaccatgcggatgcagcggaagccatggccgacgtccttgctctcggtccacagcaccg 325 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | || ||||||||||||||||| | || |||||||| |||||||| | Sbjct: 324 actcgtcctggtactctgggttgtacggcaccag-cttacggggtgggattggccgagcg 266 Query: 488 agtgcttga 496 ||||||||| Sbjct: 265 agtgcttga 257
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 268 bits (135), Expect = 2e-68 Identities = 240/275 (87%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 547 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgttggtgccgtc 488 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 487 gcgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 428 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 |||||||| ||||| | |||||||| ||| ||||| | ||||||||||||||||||||| Sbjct: 427 gaccatgcggacgcagcggaagccgtggccgacgtcgcggctctccgtccacagcaccga 368 Query: 429 ctcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggga 488 ||||||| || || | |||||||| |||||||| || |||||| || ||| |||| Sbjct: 367 ctcgtcctggtagccggggttgtagggcaccagcttgaccgggtggccctcgccctggga 308 Query: 489 gtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||| ||| ||| || |||| |||| Sbjct: 307 gtgcttgatggcctcgccggtgaccctgttgacga 273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 11931364 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 11931423 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 11931424 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 11931483 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 ||||||||| | ||| | |||||||| || ||||| | ||||||||||||||||||||| Sbjct: 11931484 caccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcaccga 11931543 Query: 429 ctcgtccaggaagtccgggttgtacggcaccag 461 ||||||| || | | ||||||||||||||||| Sbjct: 11931544 ctcgtcctggtatccggggttgtacggcaccag 11931576 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Plus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 11931979 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 11932038 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 11932039 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 11932098 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 ||| |||||| | ||| | ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 11932099 tcagcatgcggatgcagcggaagctcttgcccacgtcgccgctctccgtccacagcaccg 11932158 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | ||||||||| ||||| |||| Sbjct: 11932159 actcgtccgggtactccgggttgaacggcgccag 11932192 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 477 ctggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 11932317 ctggccgagggagtgcttgatggcgaggccggtggccttgttgacga 11932363 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 485 gggagtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 |||||||||||||||||| ||| ||| || |||| |||| ||||||| Sbjct: 11931709 gggagtgcttgatggcctcgccggtgaccctgttgacgagggcgaag 11931755 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Minus Query: 363 gttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacag 422 |||||||| |||| | | || |||| |||||| | |||||||| |||| | |||||||| Sbjct: 11843241 gttgttcatcatgtggatgcgcctgtagccgtcggccacgtccacgctcgcagtccacag 11843182 Query: 423 caccgactcgtccag 437 |||||||||||||| Sbjct: 11843181 gaccgactcgtccag 11843167 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 ggagtgcttgatggcctggccagtggccttgttcacga 523 |||||| |||| ||| | |||||||||||||||||||| Sbjct: 11843006 ggagtgtttgagggcatcgccagtggccttgttcacga 11842969 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 487 gagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||| | ||| |||||||| ||||||| Sbjct: 11852621 gagtgcttgatggcttcgccggtggccttattcacga 11852585 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 2761351 catacaagcacaacggctcc 2761370
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 11928127 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 11928186 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 11928187 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 11928246 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 ||||||||| | ||| | |||||||| || ||||| | ||||||||||||||||||||| Sbjct: 11928247 caccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcaccga 11928306 Query: 429 ctcgtccaggaagtccgggttgtacggcaccag 461 ||||||| || | | ||||||||||||||||| Sbjct: 11928307 ctcgtcctggtatccggggttgtacggcaccag 11928339 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Plus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 11928742 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 11928801 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 11928802 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 11928861 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 ||| |||||| | ||| | ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 11928862 tcagcatgcggatgcagcggaagctcttgcccacgtcgccgctctccgtccacagcaccg 11928921 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | ||||||||| ||||| |||| Sbjct: 11928922 actcgtccgggtactccgggttgaacggcgccag 11928955 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 477 ctggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 11929080 ctggccgagggagtgcttgatggcgaggccggtggccttgttgacga 11929126 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 485 gggagtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 |||||||||||||||||| ||| ||| || |||| |||| ||||||| Sbjct: 11928472 gggagtgcttgatggcctcgccggtgaccctgttgacgagggcgaag 11928518 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Minus Query: 363 gttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacag 422 |||||||| |||| | | || |||| |||||| | |||||||| |||| | |||||||| Sbjct: 11840004 gttgttcatcatgtggatgcgcctgtagccgtcggccacgtccacgctcgcagtccacag 11839945 Query: 423 caccgactcgtccag 437 |||||||||||||| Sbjct: 11839944 gaccgactcgtccag 11839930 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 ggagtgcttgatggcctggccagtggccttgttcacga 523 |||||| |||| ||| | |||||||||||||||||||| Sbjct: 11839769 ggagtgtttgagggcatcgccagtggccttgttcacga 11839732 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 487 gagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||| | ||| |||||||| ||||||| Sbjct: 11849384 gagtgcttgatggcttcgccggtggccttattcacga 11849348 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 2761461 catacaagcacaacggctcc 2761480
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 32626 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 32685 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 32686 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 32745 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 ||||||||| | ||| | |||||||| || ||||| | ||||||||||||||||||||| Sbjct: 32746 caccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcaccga 32805 Query: 429 ctcgtccaggaagtccgggttgtacggcaccag 461 ||||||| || | | ||||||||||||||||| Sbjct: 32806 ctcgtcctggtatccggggttgtacggcaccag 32838 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Plus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 33241 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 33300 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 33301 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 33360 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 ||| |||||| | ||| | ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 33361 tcagcatgcggatgcagcggaagctcttgcccacgtcgccgctctccgtccacagcaccg 33420 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | ||||||||| ||||| |||| Sbjct: 33421 actcgtccgggtactccgggttgaacggcgccag 33454 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 477 ctggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 33579 ctggccgagggagtgcttgatggcgaggccggtggccttgttgacga 33625 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 485 gggagtgcttgatggcctggccagtggccttgttcacgatggcgaag 531 |||||||||||||||||| ||| ||| || |||| |||| ||||||| Sbjct: 32971 gggagtgcttgatggcctcgccggtgaccctgttgacgagggcgaag 33017
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 252 bits (127), Expect = 1e-63 Identities = 244/283 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 367 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 308 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 307 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 248 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 247 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 188 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 || ||||| | | ||||||||| ||||||| || ||| ||||||||||||||||||| Sbjct: 187 acgcgtcctcgtactccgggttgaacggcacaagcttcacggggtgggactggccgaggg 128 Query: 488 agtgcttgatggcctggccagtggccttgttcacgatggcgaa 530 ||||||||| ||| | || ||||||||||| |||| |||||| Sbjct: 127 agtgcttgacggcgagtccggtggccttgttgacgagggcgaa 85 Score = 236 bits (119), Expect = 6e-59 Identities = 233/271 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 886 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 827 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 826 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 767 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| ||| ||||||||||||||||||| | Sbjct: 766 tcaccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacag 707 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | || |||||||| || ||||| ||| |||||| ||| ||| || Sbjct: 706 actcgtcctggtactctgggttgtagggaaccagcttcaccgggtggccctgtccggtgg 647 Query: 488 agtgcttgatggcctggccagtggccttgtt 518 ||||||||||||| | ||| ||| ||||||| Sbjct: 646 agtgcttgatggcttcgccggtgaccttgtt 616
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 252 bits (127), Expect = 1e-63 Identities = 244/283 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 582 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 523 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 522 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 463 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 462 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 403 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 || ||||| | | ||||||||| ||||||| || ||| ||||||||||||||||||| Sbjct: 402 acgcgtcctcgtactccgggttgaacggcacaagcttcacggggtgggactggccgaggg 343 Query: 488 agtgcttgatggcctggccagtggccttgttcacgatggcgaa 530 ||||||||| ||| | || ||||||||||| |||| |||||| Sbjct: 342 agtgcttgacggcgagtccggtggccttgttgacgagggcgaa 300 Score = 236 bits (119), Expect = 6e-59 Identities = 233/271 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 1101 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 1042 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 1041 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 982 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| ||| ||||||||||||||||||| | Sbjct: 981 tcaccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacag 922 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | || |||||||| || ||||| ||| |||||| ||| ||| || Sbjct: 921 actcgtcctggtactctgggttgtagggaaccagcttcaccgggtggccctgtccggtgg 862 Query: 488 agtgcttgatggcctggccagtggccttgtt 518 ||||||||||||| | ||| ||| ||||||| Sbjct: 861 agtgcttgatggcttcgccggtgaccttgtt 831
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 252 bits (127), Expect = 1e-63 Identities = 190/211 (90%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1058 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatctcggtaccgt 999 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 998 catggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 939 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| ||||| | |||||||||||| ||||| | |||||| ||||| ||||| | Sbjct: 938 tgaccatgcggacgcagcggaagccgttgccgacgtcgcggctctcggtccagagcacgg 879 Query: 428 actcgtccaggaagtccgggttgtacggcac 458 |||||||| || ||||||||||||| ||||| Sbjct: 878 actcgtcctggtagtccgggttgtagggcac 848 Score = 206 bits (104), Expect = 5e-50 Identities = 167/188 (88%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||| Sbjct: 560 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggcggtgccgt 501 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || |||||||||||||||| | |||||| Sbjct: 500 cgtgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgaggcgggtgttgt 441 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 440 tgaccatgcggatgcagcggaagcccttgcccacgtccttgctctccgtccacagcaccg 381 Query: 428 actcgtcc 435 || ||||| Sbjct: 380 acgcgtcc 373 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 469 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||||||||||||||||||||| | || ||||||||||| |||| Sbjct: 339 gggtgggactggccgagggagtgcttgatggcgagccccgtggccttgttgacga 285
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 252 bits (127), Expect = 1e-63 Identities = 244/283 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 582 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 523 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 522 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 463 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 462 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 403 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 || ||||| | | ||||||||| ||||||| || ||| ||||||||||||||||||| Sbjct: 402 acgcgtcctcgtactccgggttgaacggcacaagcttcacggggtgggactggccgaggg 343 Query: 488 agtgcttgatggcctggccagtggccttgttcacgatggcgaa 530 ||||||||| ||| | || ||||||||||| |||| |||||| Sbjct: 342 agtgcttgacggcgagtccggtggccttgttgacgagggcgaa 300 Score = 236 bits (119), Expect = 6e-59 Identities = 233/271 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 1101 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 1042 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 1041 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 982 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| ||| ||||||||||||||||||| | Sbjct: 981 tcaccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacag 922 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | || |||||||| || ||||| ||| |||||| ||| ||| || Sbjct: 921 actcgtcctggtactctgggttgtagggaaccagcttcaccgggtggccctgtccggtgg 862 Query: 488 agtgcttgatggcctggccagtggccttgtt 518 ||||||||||||| | ||| ||| ||||||| Sbjct: 861 agtgcttgatggcttcgccggtgaccttgtt 831
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 252 bits (127), Expect = 1e-63 Identities = 244/283 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 367 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 308 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 307 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 248 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 247 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 188 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 || ||||| | | ||||||||| ||||||| || ||| ||||||||||||||||||| Sbjct: 187 acgcgtcctcgtactccgggttgaacggcacaagcttcacggggtgggactggccgaggg 128 Query: 488 agtgcttgatggcctggccagtggccttgttcacgatggcgaa 530 ||||||||| ||| | || ||||||||||| |||| |||||| Sbjct: 127 agtgcttgacggcgagtccggtggccttgttgacgagggcgaa 85 Score = 236 bits (119), Expect = 6e-59 Identities = 233/271 (85%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 886 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 827 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 826 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 767 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| ||| ||||||||||||||||||| | Sbjct: 766 tcaccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacag 707 Query: 428 actcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgaggg 487 |||||||| || | || |||||||| || ||||| ||| |||||| ||| ||| || Sbjct: 706 actcgtcctggtactctgggttgtagggaaccagcttcaccgggtggccctgtccggtgg 647 Query: 488 agtgcttgatggcctggccagtggccttgtt 518 ||||||||||||| | ||| ||| ||||||| Sbjct: 646 agtgcttgatggcttcgccggtgaccttgtt 616
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 248 bits (125), Expect = 2e-62 Identities = 185/205 (90%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 492 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatctcggtaccgt 433 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 432 catggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 373 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| ||||| | |||||||||||| ||||| | |||||| ||||| ||||| | Sbjct: 372 tgaccatgcggacgcagcggaagccgttgccgacgtcgcggctctcggtccagagcacgg 313 Query: 428 actcgtccaggaagtccgggttgta 452 |||||||| || ||||||||||||| Sbjct: 312 actcgtcctggtagtccgggttgta 288
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 214 bits (108), Expect = 2e-52 Identities = 168/188 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 310 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatctcggtaccgt 251 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 | ||||||||||| || ||||||||||| || |||||||||||||||| | |||||| Sbjct: 250 catggacgccgccgggggccttgtcgccgtggaaggcgtcgaagttgaggcgggtgttgt 191 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 190 tgaccatgcggatgcagcggaagcccttgcccacgtccttgctctccgtccacagcaccg 131 Query: 428 actcgtcc 435 || ||||| Sbjct: 130 acgcgtcc 123 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 469 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||||||||||||||||||||| | || ||||||||||| |||| Sbjct: 89 gggtgggactggccgagggagtgcttgatggcgagccccgtggccttgttgacga 35
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 210 bits (106), Expect = 3e-51 Identities = 232/274 (84%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 738 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 737 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 678 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 677 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 618 Query: 430 tcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgagggag 489 ||||||| | | || || ||||| |||||| ||| ||||||||||| ||||||| |||| Sbjct: 617 tcgtccatgtactctggattgtagcgcaccaaacggacagggtgggattggccgatggag 558 Query: 490 tgcttgatggcctggccagtggccttgttcacga 523 ||||||| ||| | ||| ||||||||||| |||| Sbjct: 557 tgcttgagggcgtcgccggtggccttgttgacga 524
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 210 bits (106), Expect = 3e-51 Identities = 232/274 (84%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 738 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 737 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 678 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 677 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 618 Query: 430 tcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgagggag 489 ||||||| | | || || ||||| |||||| ||| ||||||||||| ||||||| |||| Sbjct: 617 tcgtccatgtactctggattgtagcgcaccaaacggacagggtgggattggccgatggag 558 Query: 490 tgcttgatggcctggccagtggccttgttcacga 523 ||||||| ||| | ||| ||||||||||| |||| Sbjct: 557 tgcttgagggcgtcgccggtggccttgttgacga 524
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 210 bits (106), Expect = 3e-51 Identities = 232/274 (84%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 794 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 735 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 734 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 675 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 674 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 615 Query: 430 tcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgagggag 489 ||||||| | | || || ||||| |||||| ||| ||||||||||| ||||||| |||| Sbjct: 614 tcgtccatgtactctggattgtagcgcaccaaacggacagggtgggattggccgatggag 555 Query: 490 tgcttgatggcctggccagtggccttgttcacga 523 ||||||| ||| | ||| ||||||||||| |||| Sbjct: 554 tgcttgagggcgtcgccggtggccttgttgacga 521
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 210 bits (106), Expect = 3e-51 Identities = 232/274 (84%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 1080 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 1021 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 1020 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 961 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 960 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 901 Query: 430 tcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgagggag 489 ||||||| | | || || ||||| |||||| ||| ||||||||||| ||||||| |||| Sbjct: 900 tcgtccatgtactctggattgtagcgcaccaaacggacagggtgggattggccgatggag 841 Query: 490 tgcttgatggcctggccagtggccttgttcacga 523 ||||||| ||| | ||| ||||||||||| |||| Sbjct: 840 tgcttgagggcgtcgccggtggccttgttgacga 807
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 210 bits (106), Expect = 3e-51 Identities = 232/274 (84%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 837 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 778 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 777 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 718 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 717 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 658 Query: 430 tcgtccaggaagtccgggttgtacggcaccagacgcacagggtgggactggccgagggag 489 ||||||| | | || || ||||| |||||| ||| ||||||||||| ||||||| |||| Sbjct: 657 tcgtccatgtactctggattgtagcgcaccaaacggacagggtgggattggccgatggag 598 Query: 490 tgcttgatggcctggccagtggccttgttcacga 523 ||||||| ||| | ||| ||||||||||| |||| Sbjct: 597 tgcttgagggcgtcgccggtggccttgttgacga 564
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 208 bits (105), Expect = 1e-50 Identities = 186/213 (87%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct: 231 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgttggggccgtc 172 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||| ||||||||||||| ||||||||||| || || ||| || |||||||| |||||||| Sbjct: 171 gcgcacgccgccgtggtccttgtcgccgtggaaggggtccaaattgaggtaaatgttgtt 112 Query: 369 caccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccga 428 |||||||| ||||| | |||||||| ||| ||||| | | ||||||||||||||||||| Sbjct: 111 gaccatgcggacgcagcggaagccgtggccgacgtcgcggttctccgtccacagcaccga 52 Query: 429 ctcgtccaggaagtccgggttgtacggcaccag 461 ||||||| || | | |||||||| |||||||| Sbjct: 51 ctcgtcctggtaaccggggttgtagggcaccag 19
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 204 bits (103), Expect = 2e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 1345 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 1286 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 1285 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 1226 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 | |||||||| | ||| | |||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 1225 tgaccatgcggatgcagcggaagcccttgccgacgtccttgctctccgtccacagcaccg 1166 Query: 428 actcgtccaggaagtccgggttgtacggcac 458 || ||||| | | ||||||||| ||||||| Sbjct: 1165 acgcgtcctcgtactccgggttgaacggcac 1135 Score = 202 bits (102), Expect = 8e-49 Identities = 186/214 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 2032 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 1973 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 1972 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 1913 Query: 368 tcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccg 427 |||||||||| | ||| | |||||| |||||||| | | |||||||| ||||||| || | Sbjct: 1912 tcaccatgcggatgcagcggaagcccttgcccacatgcttgctctccctccacagtacag 1853 Query: 428 actcgtccaggaagtccgggttgtacggcaccag 461 |||||||| || | || |||||||| || ||||| Sbjct: 1852 actcgtcctggtactctgggttgtagggaaccag 1819 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 469 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 528 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 1017 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 958 Query: 529 aa 530 || Sbjct: 957 aa 956
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 198 bits (100), Expect = 1e-47 Identities = 190/220 (86%) Strand = Plus / Minus Query: 242 agggctggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcgg 301 ||||| |||||||||||| |||||||||||||| | ||||| ||| ||||| || || Sbjct: 689 agggcaggatcttccagctctggttgtcgcccttggcccactcccacagcaccacggtgg 630 Query: 302 tgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtaga 361 |||||||| | |||||||||||| ||||||||||| || |||||||||||||||| || Sbjct: 629 tgccgtcgtgcacgccgccgtggcccttgtcgccgtggaaggcgtcgaagttgaggcgga 570 Query: 362 tgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccaca 421 |||||||||||||||| | ||| | |||||| ||||||||||| | |||||||||||||| Sbjct: 569 tgttgttcaccatgcggatgcagcggaagcccttgcccacgtcgccgctctccgtccaca 510 Query: 422 gcaccgactcgtccaggaagtccgggttgtacggcaccag 461 |||||||||||||| || | ||||||||| |||||||||| Sbjct: 509 gcaccgactcgtcctggtactccgggttgaacggcaccag 470 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 469 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 528 |||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||| Sbjct: 369 gggtgggactggccgagggagtgcttgatggcgagcccagtggccttgttgacgagggcg 310 Query: 529 aa 530 || Sbjct: 309 aa 308
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 165 bits (83), Expect = 2e-37 Identities = 161/187 (86%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 227774 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 227715 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 227714 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 227655 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 227654 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 227595 Query: 430 tcgtcca 436 ||||||| Sbjct: 227594 tcgtcca 227588 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 ||||||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| Sbjct: 226866 acagggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacga 226809 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagccatgcatgcatcgatc 209 |||||||||||||||||||| Sbjct: 298615 gagccatgcatgcatcgatc 298596
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 165 bits (83), Expect = 2e-37 Identities = 161/187 (86%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 69444 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 69385 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 69384 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 69325 Query: 370 accatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacagcaccgac 429 ||||| | | ||||| || || | || |||||||||||||||||||||||||| ||| Sbjct: 69324 accatcctgatgcaccgaaacccactcccaacgtccctgctctccgtccacagcacagac 69265 Query: 430 tcgtcca 436 ||||||| Sbjct: 69264 tcgtcca 69258 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 466 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacga 523 ||||||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| Sbjct: 68536 acagggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacga 68479 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagccatgcatgcatcgatc 209 |||||||||||||||||||| Sbjct: 140285 gagccatgcatgcatcgatc 140266
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtc 404 ||||||||||||||||||||| |||||| || ||||| | |||||||| ||| | || Sbjct: 161967 gtcgaagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgtt 162023 Query: 405 cctgctctccgtccacagcaccgactc 431 | ||||||||| ||||||||||||||| Sbjct: 162024 cttgctctccgcccacagcaccgactc 162050 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 481 ccgagggagtgcttgatggcctggccagtggccttgttcac 521 |||||||||||||||||||| |||| |||||||||||||| Sbjct: 162328 ccgagggagtgcttgatggcttggctggtggccttgttcac 162368
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtc 404 ||||||||||||||||||||| |||||| || ||||| | |||||||| ||| | || Sbjct: 56034 gtcgaagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgtt 56090 Query: 405 cctgctctccgtccacagcaccgactc 431 | ||||||||| ||||||||||||||| Sbjct: 56091 cttgctctccgcccacagcaccgactc 56117 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 481 ccgagggagtgcttgatggcctggccagtggccttgttcac 521 |||||||||||||||||||| |||| |||||||||||||| Sbjct: 56395 ccgagggagtgcttgatggcttggctggtggccttgttcac 56435
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtc 404 ||||||||||||||||||||| |||||| || ||||| | |||||||| ||| | || Sbjct: 4394426 gtcgaagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgtt 4394482 Query: 405 cctgctctccgtccacagcaccgactc 431 | ||||||||| ||||||||||||||| Sbjct: 4394483 cttgctctccgcccacagcaccgactc 4394509 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 481 ccgagggagtgcttgatggcctggccagtggccttgttcac 521 |||||||||||||||||||| |||| |||||||||||||| Sbjct: 4394787 ccgagggagtgcttgatggcttggctggtggccttgttcac 4394827
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtc 404 ||||||||||||||||||||| |||||| || ||||| | |||||||| ||| | || Sbjct: 4395247 gtcgaagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgtt 4395303 Query: 405 cctgctctccgtccacagcaccgactc 431 | ||||||||| ||||||||||||||| Sbjct: 4395304 cttgctctccgcccacagcaccgactc 4395330 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 481 ccgagggagtgcttgatggcctggccagtggccttgttcac 521 |||||||||||||||||||| |||| |||||||||||||| Sbjct: 4395608 ccgagggagtgcttgatggcttggctggtggccttgttcac 4395648
>gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23 mRNA sequence Length = 332 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||||||||||||||||| Sbjct: 24 gatcttccagcgctggttgtcgcc 1
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 46.1 bits (23), Expect = 0.12 Identities = 62/75 (82%) Strand = Plus / Plus Query: 363 gttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacag 422 |||||||| |||| | | || |||| |||||| | |||||||| |||| | |||||||| Sbjct: 67412 gttgttcatcatgtggatgcgcctgtagccgtcggccacgtccacgctcgcagtccacag 67471 Query: 423 caccgactcgtccag 437 |||||||||||||| Sbjct: 67472 gaccgactcgtccag 67486 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 486 ggagtgcttgatggcctggccagtggccttgttcacga 523 |||||| |||| ||| | |||||||||||||||||||| Sbjct: 67647 ggagtgtttgagggcatcgccagtggccttgttcacga 67684 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 487 gagtgcttgatggcctggccagtggccttgttcacga 523 |||||||||||||| | ||| |||||||| ||||||| Sbjct: 58032 gagtgcttgatggcttcgccggtggccttattcacga 58068
>ref|XM_364317.1| Magnaporthe grisea 70-15 hypothetical protein (MG09162.4) partial mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 tcggtgccgtcgcggacgccgccgt 322 |||||||||| |||||||||||||| Sbjct: 941 tcggtgccgtagcggacgccgccgt 917
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 acgacctcggtgccgtcgcgg 312 ||||||||||||||||||||| Sbjct: 245753 acgacctcggtgccgtcgcgg 245733
>emb|X97189.1|CACCEL3 Capsicum annuum mRNA for endo-beta-1,4-glucanase, ccel3 Length = 2352 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 397 cccacgtccctgctctccgtccaca 421 ||||||||||||||||| ||||||| Sbjct: 382 cccacgtccctgctctctgtccaca 406
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 413 ccgtccacagcaccgactcgtccaggaagtccg 445 |||||||||||| ||||| ||||||||||||| Sbjct: 30507 ccgtccacagcagcgactgctccaggaagtccg 30539
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 cgtcgcggacgccgccgtggt 325 ||||||||||||||||||||| Sbjct: 35758 cgtcgcggacgccgccgtggt 35738
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ggttgtacggcaccagacgc 465 |||||||||||||||||||| Sbjct: 171151 ggttgtacggcaccagacgc 171170
>ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 1850080 gttgagggcgtcgaagttga 1850061
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 44079 gccgtcgcggacgccgccgt 44098
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 754624 gagcacgacctcgatgccgtcgcg 754647
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 127916 gttgagggcgtcgaagttga 127897
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 2074937 gagcacgacctcgatgccgtcgcg 2074960
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 230538 gttgagggcgtcgaagttga 230519
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 165445 gttgagggcgtcgaagttga 165464
>gb|AY118358.1| Drosophila melanogaster RE04357 full insert cDNA Length = 4217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggttgtacggcaccagacgc 465 |||||||||||||||||||| Sbjct: 2391 ggttgtacggcaccagacgc 2372
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ggttgtacggcaccagacgc 465 |||||||||||||||||||| Sbjct: 43414 ggttgtacggcaccagacgc 43433
>ref|NM_167312.1| Drosophila melanogaster CG10353-RB, transcript variant B (CG10353), mRNA Length = 4660 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggttgtacggcaccagacgc 465 |||||||||||||||||||| Sbjct: 2850 ggttgtacggcaccagacgc 2831
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 77194 gatcttccagagctggttgtcgcc 77171
>gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 942 gatcttccagagctggttgtcgcc 919
>ref|NM_132534.1| Drosophila melanogaster CG10353-RA, transcript variant A (CG10353), mRNA Length = 4378 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggttgtacggcaccagacgc 465 |||||||||||||||||||| Sbjct: 2568 ggttgtacggcaccagacgc 2549
>gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 1649266 gagcacgacctcgatgccgtcgcg 1649289
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 tgcccacgtccctgctctccgtcc 418 |||||||||||||| ||||||||| Sbjct: 16708161 tgcccacgtccctgatctccgtcc 16708184
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 19716812 gccgtcgcggacgccgccgt 19716831
>emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1226 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 952 gatcttccagagctggttgtcgcc 929
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 8058643 gttgagggcgtcgaagttga 8058624
>gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete sequence Length = 1186 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 atggcctggccagtggcctt 515 |||||||||||||||||||| Sbjct: 106558 atggcctggccagtggcctt 106539
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 33307 catacaagcacaacggctcc 33326
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 106270 catacaagcacaacggctcc 106289
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagccatgcatgcatcgatc 209 |||||||||||||||||||| Sbjct: 50453 gagccatgcatgcatcgatc 50434
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 62498 gccgtcgcggacgccgccgt 62517
>emb|AL671992.5| Mouse DNA sequence from clone RP23-338G1 on chromosome X, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 agtagtagggctggatcttccagc 259 ||||||| |||||||||||||||| Sbjct: 44164 agtagtatggctggatcttccagc 44187
>dbj|AK103415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128I03, full insert sequence Length = 1894 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 353 gccgtcgcggacgccgccgt 372
>dbj|AK102139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085J19, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 tgcccacgtccctgctctccgtcc 418 |||||||||||||| ||||||||| Sbjct: 176 tgcccacgtccctgatctccgtcc 153
>dbj|AK063869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-E07, full insert sequence Length = 655 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 tgcccacgtccctgctctccgtcc 418 |||||||||||||| ||||||||| Sbjct: 173 tgcccacgtccctgatctccgtcc 150
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ggttgtacggcaccagacgc 465 |||||||||||||||||||| Sbjct: 170855 ggttgtacggcaccagacgc 170874
>dbj|AP002989.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-475J2, complete sequence Length = 107893 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cttgatggcctggccagtgg 511 |||||||||||||||||||| Sbjct: 44732 cttgatggcctggccagtgg 44751
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 993730 gagcacgacctcgatgccgtcgcg 993707
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cctcggtgccgtcgcggacg 315 |||||||||||||||||||| Sbjct: 2242886 cctcggtgccgtcgcggacg 2242905
>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-281I13 (complete covert by PAC RP1-253P07), complete sequence Length = 159876 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 atggcctggccagtggcctt 515 |||||||||||||||||||| Sbjct: 53311 atggcctggccagtggcctt 53330 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,856,231 Number of Sequences: 3902068 Number of extensions: 2856231 Number of successful extensions: 60155 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59077 Number of HSP's gapped (non-prelim): 1054 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
