>TUBE_DROVI (Q08171) Protein Tube|
          Length = 514

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
 Frame = -3

Query: 231 GRFCGRATVSVALQAA------ALLCFVALSLVSAFRVFREFDGPAAHVD---CSEDSDS 79
           G+   R TV V LQ        +   FVAL  ++  +  R  DGPAAH+    CSED   
Sbjct: 122 GKLNERPTVGVLLQLLVHAEIYSAADFVALHFLNEPKPERPTDGPAAHISLDLCSEDLSE 181

Query: 78  KQAQEQGA 55
               E GA
Sbjct: 182 DMDVEDGA 189

>IPL1_CANAL (Q59S66) Spindle assembly checkpoint kinase (EC 2.7.11.1) (Aurora|
           kinase)
          Length = 530

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +2

Query: 137 TRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSA--AAE 310
           T    +  S++   S++  S++  V  P+N+P+  HT      R+ S ++Y SSA   A 
Sbjct: 101 TPTKNSSSSSSSSHSSSLLSSSPFVEEPENQPESNHTRATSHYRTTSTSQYKSSANKDAS 160

Query: 311 HDVTSRYAAAWSRRKISQS 367
           H + +      S ++ S+S
Sbjct: 161 HSLITSSKRKTSTKQTSES 179

>DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase GgaI) (DNA MTase GgaI) (MCMT)
           (M.GgaI)
          Length = 1537

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 15/70 (21%), Positives = 38/70 (54%)
 Frame = +2

Query: 146 AETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTS 325
           + +  S++  SS+++ S++  +  P+ R      S  ++ +SP+ +R T S+  +  + S
Sbjct: 130 SSSSSSSSSSSSSSSSSSSSLLPAPRARKARRSRSNGESKKSPASSRVTRSSGRQPTILS 189

Query: 326 RYAAAWSRRK 355
            ++   ++RK
Sbjct: 190 VFSKGSTKRK 199

>CREA_BOTCI (O94130) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 435

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +2

Query: 152 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 331
           T  +  ++ S+   +       P+++P   H+S +  +  PSL  Y  + A  H+    Y
Sbjct: 219 TAATQVERESSTTATHYSQHTQPRHQPYYSHSSHNSRNHLPSLQAYAMTRAHSHEEDDHY 278

Query: 332 AAAWSRR 352
           A   ++R
Sbjct: 279 AHRHAKR 285

>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2) (Zinc finger DNA-binding protein fZic)
          Length = 501

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/74 (27%), Positives = 36/74 (48%)
 Frame = +2

Query: 119 PSNSRKTRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSS 298
           PS+ RK  K         +SS AA S  ++   P         SP+  +++P+L+   ++
Sbjct: 424 PSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGL------VSPNSETQNPNLSPAAAA 477

Query: 299 AAAEHDVTSRYAAA 340
            +A H+V+S  + A
Sbjct: 478 VSAVHNVSSGASGA 491

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +2

Query: 152 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 331
           T    T  SS+ + S   T +   N      TSP  TS SP  + +TSS ++    +S  
Sbjct: 24  TTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSST 83

Query: 332 AAAWS 346
           AA  S
Sbjct: 84  AATSS 88

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +2

Query: 152 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 331
           T    T  SS+ + S   T +   N      TSP  TS SP  + +TSS ++    +S  
Sbjct: 24  TTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSST 83

Query: 332 AAAWS 346
           AA  S
Sbjct: 84  AATSS 88

>CORO_YEAST (Q06440) Coronin-like protein|
          Length = 651

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +2

Query: 125 NSRKTRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAA 304
           +S KT+  E  +SAT  SS  A + T   A  +  P    TSP       S+ + ++   
Sbjct: 561 SSEKTKSPEQEKSATPPSSITA-AKTAITASSKEEPSAARTSPKSLGLKKSVEKLSTLVL 619

Query: 305 AEHDVTSRYAAA 340
              DV  +   A
Sbjct: 620 QLEDVVDKLTKA 631

>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein|
           homolog)
          Length = 741

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 161 SATKQSSAAACSATDTVALPQNRPK*EH 244
           SA+  S+AAA +A     LP  +PK EH
Sbjct: 53  SASSSSAAAAAAAAGAAVLPVKKPKMEH 80

>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112|
          Length = 2799

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/85 (22%), Positives = 37/85 (43%)
 Frame = +2

Query: 143  KAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVT 322
            +A T  +ATK +    C A +T +  +   K   T+P +T+++  +     +A       
Sbjct: 2167 EASTSPTATKSTEPGNCKADETASKYKGTYKWLLTNPTETAQTRCIKNEDGNATRFSISI 2226

Query: 323  SRYAAAWSRRKISQS*RARDLKDGI 397
            +   + W + K  Q    ++L D I
Sbjct: 2227 NTGKSQWEKPKFKQCKLLQELPDKI 2251

>MAGC1_HUMAN (O60732) Melanoma-associated antigen C1 (MAGE-C1 antigen)|
           (Cancer-testis antigen CT7)
          Length = 1142

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 173 QSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSS 298
           QS  + CS++ +++LPQ+ P+   + P   ++SP L R  SS
Sbjct: 741 QSPVSICSSSTSLSLPQSFPESPQSPPEGPAQSP-LQRPVSS 781

>X_HBVIL (P12912) Trans-activating protein X|
          Length = 154

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 214 PAAEPTEVGAHLAPRHLPV 270
           P+A PT+ GAHL+ R LPV
Sbjct: 42  PSALPTDYGAHLSLRGLPV 60

>GRA1_NEOCA (P90661) Dense granule protein 1 precursor (NcDG1) (Antigen Nc4.1)|
          Length = 217

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 219 GRATVSVALQAAALLCFVALSLVSAFRVFREFDGPAAHVDCSEDSDSKQAQEQ 61
           G+  V  A+  AAL+   A + +   R FR F    +    SEDS    ++EQ
Sbjct: 132 GKKRVKTAVGIAALVAAAAFAGLGLARTFRHFVPKKSKTVASEDSALGNSEEQ 184

>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)|
          Length = 562

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 25/84 (29%), Positives = 35/84 (41%)
 Frame = +2

Query: 116 GPSNSRKTRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTS 295
           GP   R  + A    +A   ++AAA +AT         P+ E   P   +  P      +
Sbjct: 90  GPGGGRLLQGAAAAAAAAAAAAAAAATAT-------AGPRGEAPPPPPPTARPGERPDGA 142

Query: 296 SAAAEHDVTSRYAAAWSRRKISQS 367
            AAA     +  AAAW   KISQ+
Sbjct: 143 GAAAA--AAAAAAAAWDTLKISQA 164

>CI046_MOUSE (Q9D3P8) Protein C9orf46 homolog|
          Length = 147

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
 Frame = -3

Query: 279 REGDREVSWG-EVCSYFGRFCGRATVSVALQA------AALLCFVALSLVSAFR 139
           R+   +++W  E   YFG F G AT+S+A  A      A L+  V LS +  ++
Sbjct: 41  RQMAMQIAWSREFLKYFGTFFGIATISLATGALKRKKPAFLVPIVPLSFIFTYQ 94

>X_HBVYW (P03165) Trans-activating protein X|
          Length = 154

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 214 PAAEPTEVGAHLAPRHLPV 270
           P+A PT+ GAHL+ R LPV
Sbjct: 42  PSAVPTDHGAHLSLRGLPV 60

>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor|
          Length = 1317

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 24/108 (22%), Positives = 42/108 (38%)
 Frame = +2

Query: 2   MWLHCTNISDCSSWIIYLAPXXXXXXXXXXXXXXT*AAGPSNSRKTRKAETRESATKQSS 181
           +W +C+N+S  +S    L+               +  +  + +  T  + T  +  +QSS
Sbjct: 279 LWTNCSNLSTTTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSS 338

Query: 182 AAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTS 325
               S+       +++P    T P   S S S    TSS  AE   +S
Sbjct: 339 TV--SSVQKTRTSEDKPSSSTTVPTSASTSES---STSSPMAETSSSS 381

>PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC 5.2.1.8)|
           (Peptidyl-prolyl isomerase G) (PPIase G) (Rotamase G)
           (Cyclophilin G) (Clk-associating RS-cyclophilin)
           (CARS-cyclophilin) (CARS-Cyp) (SR-cyclophilin) (SRcyp)
           (SR-cyp) (CASP10)
          Length = 754

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 125 NSRKTRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSR 268
           NSRK +K + +   +K+S+++   A +  A PQ+  + E   P   +R
Sbjct: 237 NSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENR 284

>PCCB_BACSU (P54541) Putative propionyl-CoA carboxylase beta chain (EC 6.4.1.3)|
           (PCCase) (Propanoyl-CoA:carbon dioxide ligase)
          Length = 506

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 110 AAGPSNSRKTRKAETRESATKQSSAAACSATDTVALPQ 223
           +A P  +++ + AE ++       AAAC   D + LP+
Sbjct: 439 SADPQKTKREKTAEYKKQNAGPYKAAACGMVDDIILPE 476

>BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like protein)|
          Length = 1058

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 328 VRRRLVQEENQPIVASAGLEGWH*DG 405
           +R +L Q+ +QP+    GLEG+  DG
Sbjct: 751 LRNKLSQQHSQPLPTGPGLEGFEEDG 776

>ASD1_NEUCR (P78710) Putative rhamnogalacturonase precursor (EC 4.2.2.-)|
           (Rhamnogalacturonan lyase) (RGase) (Ascus development
           protein 1) (Asd-I)
          Length = 540

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/70 (25%), Positives = 37/70 (52%)
 Frame = -3

Query: 354 FLLDQAAAYLLVTSCSAAAELVYLAREGDREVSWGEVCSYFGRFCGRATVSVALQAAALL 175
           F++D  +A  L+ S S ++  +   R    E+ + +  S+ G   G+ATVSV+    +  
Sbjct: 34  FVIDAGSANPLIFSVSKSSCDINSIRYRGTELQYSKQGSHIGSGLGKATVSVSQINGSKS 93

Query: 174 CFVALSLVSA 145
            F+ ++ V++
Sbjct: 94  KFIKVTCVTS 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,310,643
Number of Sequences: 219361
Number of extensions: 516915
Number of successful extensions: 1993
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1991
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)