| Clone Name | rbaal13a17 |
|---|---|
| Clone Library Name | barley_pub |
>MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db| Length = 74 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 185 CRPCGASPRSCG*CRPWC 238 C PCG CG CRP+C Sbjct: 55 CGPCGPCGPCCGPCRPYC 72 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%) Frame = +2 Query: 182 CCRPCGASPRSCG*CRPW--CC 241 CC PCG+ CG C P CC Sbjct: 31 CCSPCGSCCAPCGPCGPCGPCC 52
>MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc| Length = 55 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 185 CRPCGASPRSCG*CRPWCCPYFS 253 C PCG+ CG C P C P+ S Sbjct: 26 CGPCGSCCGPCGPCGPCCGPFGS 48
>MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd| Length = 72 Score = 28.5 bits (62), Expect = 4.6 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +2 Query: 182 CCRPCGASPRSCG*CRPWC 238 CC PCG CG C P C Sbjct: 39 CCGPCGPRCGPCGPCGPCC 57
>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2207 Score = 28.5 bits (62), Expect = 4.6 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 188 RPCGASPRSCG*CRPWCCPY 247 R G+ P S RPWCCP+ Sbjct: 2096 RGSGSGPDSATSSRPWCCPF 2115
>KRA11_HUMAN (Q07627) Keratin-associated protein 1-1 (Keratin-associated protein| 1.1) (High sulfur keratin-associated protein 1.1) (Keratin-associated protein 1.6) (Keratin-associated protein 1.7) Length = 177 Score = 28.1 bits (61), Expect = 6.1 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +2 Query: 182 CCRP--CGASPRSCG*CRPWCCPYFS 253 CCRP CG +SC CRP CC Y S Sbjct: 153 CCRPSYCG---QSC--CRPVCCCYCS 173
>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated| protein 4.14) (Ultrahigh sulfur keratin-associated protein 4.14) Length = 195 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%) Frame = +2 Query: 182 CCRPCGASPRSC--G*CRPWCC 241 CC+P PR C CRP CC Sbjct: 94 CCQPTCCRPRCCISSCCRPSCC 115 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%) Frame = +2 Query: 182 CCRPCGASPRSC--G*CRPWCC 241 CC+P PR C CRP CC Sbjct: 59 CCQPTCCRPRCCISSCCRPSCC 80 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,969,824 Number of Sequences: 219361 Number of extensions: 124418 Number of successful extensions: 583 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 482 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 581 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)