| Clone Name | rbaal13a15 |
|---|---|
| Clone Library Name | barley_pub |
>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 337 Score = 35.8 bits (81), Expect = 0.11 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Frame = -1 Query: 474 RYICSEHQIDIKDLVDLMKSMYPSYNYVDK*VISAYFHICGYRFHRIFIIFVLFRLVEVD 295 RYICS H I DL +++ YP YN I F+ V+ + Sbjct: 250 RYICSSHDCIILDLAKMLREKYPEYN-----------------------IPTEFKGVDEN 286 Query: 294 YK-VGMNSDKLKNLGWKPR-KLEETLADSIESYEKSGILNAEEE 169 K V +S KL +LG++ + LE+ ++++ G+L E Sbjct: 287 LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLRPSHE 330
>DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) (TRANSPARENT TESTA 3 protein) Length = 382 Score = 33.9 bits (76), Expect = 0.41 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 2/107 (1%) Frame = -1 Query: 498 YNKAKPCQRYICSEHQIDIKDLVDLMKSMYPSYNYVDK*VISAYFHICGYRFHRIFIIFV 319 Y +A RYICS H I + ++ YP YN + Sbjct: 242 YEQAAAKGRYICSSHDATILTISKFLRPKYPEYN-----------------------VPS 278 Query: 318 LFRLVEVDYK-VGMNSDKLKNLGWKPR-KLEETLADSIESYEKSGIL 184 F V+ + K + +S KL ++G+ + LEE +SIE+ + G L Sbjct: 279 TFEGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFL 325
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = -1 Query: 297 DYKVGMNSDKLKNLGWKPR-KLEETLADSIESYEKS 193 D + M S+K+ +LGWKP+ EE + ++E Y K+ Sbjct: 299 DMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKN 334
>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 357 Score = 31.2 bits (69), Expect = 2.7 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -1 Query: 474 RYICSEHQIDIKDLVDLMKSMYPSYN 397 RY+CS H + I L +++ YP Y+ Sbjct: 255 RYVCSSHDVTIHGLAAMLRDRYPEYD 280
>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 366 Score = 31.2 bits (69), Expect = 2.7 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -1 Query: 498 YNKAKPCQRYICSEHQIDIKDLVDLMKSMYPSY 400 Y K RYICS H I L ++K +P Y Sbjct: 243 YENPKAKGRYICSSHDATIHQLAKIIKDKWPEY 275
>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 446 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 Query: 474 RYICSEHQIDIKDLVDLMKSMYPSYNYVDK 385 RYICS H I D+ L+ +P Y+ D+ Sbjct: 262 RYICSSHDATIYDIAKLITENWPEYHIPDE 291
>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) (Cav3.1c) (NBR13) Length = 2377 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Frame = -1 Query: 498 YNKAKPCQRYICSEHQID--IKDLVDLMKSMYPSYNYVDK*VISAYFHICGYRFHRIFII 325 Y++ + ++C+ H +D I ++ L +Y ++ IC Y F IF++ Sbjct: 1597 YSRFRLLVHHLCTSHYLDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVL 1656 Query: 324 FVLFRLVEVDYK 289 +F+LV ++ Sbjct: 1657 ESVFKLVAFGFR 1668 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,931,427 Number of Sequences: 219361 Number of extensions: 1914028 Number of successful extensions: 4245 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4245 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)