ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13a15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 36 0.11
2DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 34 0.41
3TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46) 31 2.7
4DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 31 2.7
5DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 31 2.7
6DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 30 4.6
7CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel al... 30 6.0

>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 337

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
 Frame = -1

Query: 474 RYICSEHQIDIKDLVDLMKSMYPSYNYVDK*VISAYFHICGYRFHRIFIIFVLFRLVEVD 295
           RYICS H   I DL  +++  YP YN                       I   F+ V+ +
Sbjct: 250 RYICSSHDCIILDLAKMLREKYPEYN-----------------------IPTEFKGVDEN 286

Query: 294 YK-VGMNSDKLKNLGWKPR-KLEETLADSIESYEKSGILNAEEE 169
            K V  +S KL +LG++ +  LE+    ++++    G+L    E
Sbjct: 287 LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLRPSHE 330



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>DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase) (TRANSPARENT TESTA 3
           protein)
          Length = 382

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
 Frame = -1

Query: 498 YNKAKPCQRYICSEHQIDIKDLVDLMKSMYPSYNYVDK*VISAYFHICGYRFHRIFIIFV 319
           Y +A    RYICS H   I  +   ++  YP YN                       +  
Sbjct: 242 YEQAAAKGRYICSSHDATILTISKFLRPKYPEYN-----------------------VPS 278

Query: 318 LFRLVEVDYK-VGMNSDKLKNLGWKPR-KLEETLADSIESYEKSGIL 184
            F  V+ + K +  +S KL ++G+  +  LEE   +SIE+  + G L
Sbjct: 279 TFEGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFL 325



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>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 355

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 297 DYKVGMNSDKLKNLGWKPR-KLEETLADSIESYEKS 193
           D +  M S+K+ +LGWKP+   EE +  ++E Y K+
Sbjct: 299 DMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKN 334



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>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 357

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 474 RYICSEHQIDIKDLVDLMKSMYPSYN 397
           RY+CS H + I  L  +++  YP Y+
Sbjct: 255 RYVCSSHDVTIHGLAAMLRDRYPEYD 280



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>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 366

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 498 YNKAKPCQRYICSEHQIDIKDLVDLMKSMYPSY 400
           Y   K   RYICS H   I  L  ++K  +P Y
Sbjct: 243 YENPKAKGRYICSSHDATIHQLAKIIKDKWPEY 275



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>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 446

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 474 RYICSEHQIDIKDLVDLMKSMYPSYNYVDK 385
           RYICS H   I D+  L+   +P Y+  D+
Sbjct: 262 RYICSSHDATIYDIAKLITENWPEYHIPDE 291



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>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
            (Cav3.1c) (NBR13)
          Length = 2377

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -1

Query: 498  YNKAKPCQRYICSEHQID--IKDLVDLMKSMYPSYNYVDK*VISAYFHICGYRFHRIFII 325
            Y++ +    ++C+ H +D  I  ++ L        +Y    ++     IC Y F  IF++
Sbjct: 1597 YSRFRLLVHHLCTSHYLDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVL 1656

Query: 324  FVLFRLVEVDYK 289
              +F+LV   ++
Sbjct: 1657 ESVFKLVAFGFR 1668


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,931,427
Number of Sequences: 219361
Number of extensions: 1914028
Number of successful extensions: 4245
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4245
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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