| Clone Name | rbaal13a15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 407 gggtacatgctcttcatcaaatccaccaaatcttttatgtcgatttggtgttctgaacat 466 |||||||||||||||||||||||||||||||| || ||||| ||||||| || | |||| Sbjct: 47660 gggtacatgctcttcatcaaatccaccaaatccttcatgtccatttggtcttgagcacat 47601 Query: 467 atgtacctctgacatgg 483 |||||||||| |||||| Sbjct: 47600 atgtacctctcacatgg 47584 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 377 atgacttacttgtctacatagttatagctggggtacatgctcttcatcaaa 427 |||||||||||||||||||| || ||| | ||||||||| ||||||||||| Sbjct: 24266 atgacttacttgtctacataattgtagttagggtacatggtcttcatcaaa 24216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 407 gggtacatgctcttcatcaaatccaccaaatc 438 ||||||||||||||||||||||||| |||||| Sbjct: 45358 gggtacatgctcttcatcaaatccaacaaatc 45327 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 407 gggtacatgctcttcatcaaatccaccaaatcttt 441 ||||||||||||||||||||||||| |||||||| Sbjct: 36953 gggtacatgctcttcatcaaatccaaaaaatcttt 36919 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Minus Query: 380 acttacttgtctacatagttatagctggggtacatgctcttcatcaaatcca 431 |||||||||||| |||| || ||| | ||||||||| ||||||||| ||||| Sbjct: 19550 acttacttgtctgcataattgtagttagggtacatgttcttcatcagatcca 19499 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 515 tcagcgacatcgcgaacgtctactatgggccagaatttgtt 555 ||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 19415 tcagcaacatcacggacatctaccatgggccagaatttgtt 19375
>dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G18, full insert sequence Length = 1342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 407 gggtacatgctcttcatcaaatccaccaaatc 438 ||||||||||||||||||||||||| |||||| Sbjct: 878 gggtacatgctcttcatcaaatccaacaaatc 847
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 304 aaccagtctaaacaaaacaaaaa 326 ||||||||||||||||||||||| Sbjct: 198121 aaccagtctaaacaaaacaaaaa 198099
>emb|AL390797.16| Human DNA sequence from clone RP11-225L12 on chromosome 1 Contains the HBXIP gene for Hepatitis B virus x interacting protein, a novel transcript and the 5' end of the PROK1 gene for Prokineticin 1, complete sequence Length = 62271 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 253 tcctagattcttaagtttatctgaattcat 282 |||||||||| ||| ||||||||||||||| Sbjct: 50035 tcctagattcctaaatttatctgaattcat 50006
>emb|AL157409.16| Human DNA sequence from clone RP5-823D19 on chromosome 1q42.11-43 Contains the 5' end of the SIPA1L2 gene for signal-induced proliferation-associated 1 like 2, complete sequence Length = 143798 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 taaacaaaacaaaaatgatgaa 333 |||||||||||||||||||||| Sbjct: 109544 taaacaaaacaaaaatgatgaa 109523
>gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7p11.2-p2, complete sequence Length = 166680 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 548 aatttgttatttattgtgtcag 569 |||||||||||||||||||||| Sbjct: 77585 aatttgttatttattgtgtcag 77606
>tpe|BN000407.1| TPA: TPA_inf: Anopheles gambiae mod(mdg4) gene Length = 48000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 311 ctaaacaaaacaaaaatgatga 332 |||||||||||||||||||||| Sbjct: 20784 ctaaacaaaacaaaaatgatga 20805
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 306 ccagtctaaacaaaacaaaaatgatgaaa 334 ||||| |||||||||| |||||||||||| Sbjct: 134173 ccagtgtaaacaaaactaaaatgatgaaa 134145
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 cttcatcaaatccaccaaatc 438 ||||||||||||||||||||| Sbjct: 20827 cttcatcaaatccaccaaatc 20847
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 cttcatcaaatccaccaaatc 438 ||||||||||||||||||||| Sbjct: 62360 cttcatcaaatccaccaaatc 62380
>ref|XM_709938.1| Candida albicans SC5314 hypothetical protein (CaO19.7231), mRNA Length = 1149 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacaaaacaaaaatgatgaaaatcc 338 ||||||||| ||||||||||||||| Sbjct: 923 aacaaaacagaaatgatgaaaatcc 899
>emb|AL627223.23| Human DNA sequence from clone RP11-184B22 on chromosome 9 Contains the 3' end of a gene for DKFZP434C212 protein (DKFZP434C212), a methylation-controlled J protein (MCJ) pseudogene, and CpG island, complete sequence Length = 91310 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 cagtctaaacaaaacaaaaatgatg 331 ||||| ||||||||||||||||||| Sbjct: 90506 cagtcaaaacaaaacaaaaatgatg 90530
>emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on chromosome 13 Contains the MTMR6 gene for myotubularin related protein 6, the 5' end of a novel gene (KIAA0410) and 2 CpG islands, complete sequence Length = 122589 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 612 tgagcacatcagcctgtaaca 632 ||||||||||||||||||||| Sbjct: 52096 tgagcacatcagcctgtaaca 52076
>emb|AL359632.9| Human DNA sequence from clone RP11-269P11 on chromosome 9 Contains the 3' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1 and a CpG island, complete sequence Length = 95397 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 cagtctaaacaaaacaaaaatgatg 331 ||||| ||||||||||||||||||| Sbjct: 1196 cagtcaaaacaaaacaaaaatgatg 1220
>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a ribosomal protein L31 (RPL31) pseudogene, the BUP gene for BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion region (mouse) (MGC12685), the 5' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and seven CpG islands, complete sequence Length = 138094 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgacatggttttgccttgttg 496 ||||||||||||||||||||| Sbjct: 115471 tgacatggttttgccttgttg 115451
>emb|AL935260.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 9/11 Length = 298050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 gtcagcgacatcgcgaacgtc 534 ||||||||||||||||||||| Sbjct: 272464 gtcagcgacatcgcgaacgtc 272484
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 cttcatcaaatccaccaaatc 438 ||||||||||||||||||||| Sbjct: 22958347 cttcatcaaatccaccaaatc 22958367
>gb|AF195776.1|AF195776 Candida albicans high-affinity iron permease CaFTR2 gene, complete cds Length = 2100 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacaaaacaaaaatgatgaaaatcc 338 ||||||||| ||||||||||||||| Sbjct: 1327 aacaaaacagaaatgatgaaaatcc 1303
>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full insert sequence Length = 1272 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 515 tcagcgacatcgcgaacgtctactatgggccagaatttgtt 555 ||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 790 tcagcaacatcacggacatctaccatgggccagaatttgtt 750
>ref|NM_125649.2| Arabidopsis thaliana unknown protein AT5G62550 mRNA, complete cds Length = 1741 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cagtctaaacaaaacaaaaa 326 |||||||||||||||||||| Sbjct: 31 cagtctaaacaaaacaaaaa 50
>ref|NM_111908.4| Arabidopsis thaliana enzyme inhibitor/ pectinesterase AT3G10720 transcript variant AT3G10720.2 mRNA, complete cds Length = 2050 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatgaaaat 336 |||||||||||||| ||||||||| Sbjct: 18 aaacaaaacaaaaaggatgaaaat 41
>gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosome 8, complete sequence Length = 224322 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tcctcggtttccatcctaga 259 |||||||||||||||||||| Sbjct: 185553 tcctcggtttccatcctaga 185572
>gb|U97010.2| Caenorhabditis elegans cosmid W08A12, complete sequence Length = 36004 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 gtctaaacaaaacaaaaatgatgaaaat 336 ||||||| | |||||||||||||||||| Sbjct: 27276 gtctaaaaataacaaaaatgatgaaaat 27303
>gb|AC009844.7| Drosophila melanogaster clone BACR01L16, complete sequence Length = 168238 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 caaaacaaaaatgatgaaaa 335 |||||||||||||||||||| Sbjct: 107073 caaaacaaaaatgatgaaaa 107092
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence Length = 164461 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 aattcatcccgaccttataatcca 299 |||| ||||||||||||||||||| Sbjct: 56286 aattgatcccgaccttataatcca 56263
>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete sequence Length = 213181 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccagtctaaacaaaacaaaa 325 |||||||||||||||||||| Sbjct: 106808 ccagtctaaacaaaacaaaa 106789
>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete sequence Length = 180482 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gacatggttttgccttgttg 496 |||||||||||||||||||| Sbjct: 141983 gacatggttttgccttgttg 142002
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete sequence Length = 205655 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gacatggttttgccttgttg 496 |||||||||||||||||||| Sbjct: 67689 gacatggttttgccttgttg 67708
>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence Length = 222382 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tctaaacaaaacaaaaatga 329 |||||||||||||||||||| Sbjct: 76847 tctaaacaaaacaaaaatga 76866
>gb|AC183669.3| Pan troglodytes BAC clone CH251-549L23 from chromosome 19, complete sequence Length = 139061 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 tactatgggccagaatttgt 554 |||||||||||||||||||| Sbjct: 6098 tactatgggccagaatttgt 6079
>gb|BT011527.1| Drosophila melanogaster RE32262 full insert cDNA Length = 3390 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3210 aaaacaaaaatgatgaaaat 3229
>gb|AY459544.1| Drosophila simulans Cu-Zn superoxidase dismutase 5' flanking region Length = 604 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 345 aaaacaaaaatgatgaaaat 326
>ref|XM_859935.1| PREDICTED: Canis familiaris similar to Beta-adrenergic receptor kinase 1 (Beta-ARK-1) (G-protein coupled receptor kinase 2), transcript variant 4 (LOC483701), mRNA Length = 3218 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 agctggggtacatgctcttc 421 |||||||||||||||||||| Sbjct: 221 agctggggtacatgctcttc 240
>ref|XM_540822.2| PREDICTED: Canis familiaris similar to Beta-adrenergic receptor kinase 1 (Beta-ARK-1) (G-protein coupled receptor kinase 2), transcript variant 1 (LOC483701), mRNA Length = 3170 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 agctggggtacatgctcttc 421 |||||||||||||||||||| Sbjct: 185 agctggggtacatgctcttc 204
>ref|XM_846992.1| PREDICTED: Canis familiaris similar to Beta-adrenergic receptor kinase 1 (Beta-ARK-1) (G-protein coupled receptor kinase 2), transcript variant 2 (LOC483701), mRNA Length = 3191 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 agctggggtacatgctcttc 421 |||||||||||||||||||| Sbjct: 194 agctggggtacatgctcttc 213
>gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosome 8, complete sequence Length = 194109 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcctcggtttccatcctaga 259 |||||||||||||||||||| Sbjct: 114864 tcctcggtttccatcctaga 114845
>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence, complete sequence Length = 80379 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatgaaaat 336 |||||||||||||| ||||||||| Sbjct: 58811 aaacaaaacaaaaaggatgaaaat 58834
>gb|AC126558.4| Mus musculus BAC clone RP23-300A11 from 19, complete sequence Length = 159453 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccagaatttgttatttatt 562 |||||||||||||||||||| Sbjct: 102649 gccagaatttgttatttatt 102630
>ref|XM_722064.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06497) partial mRNA Length = 984 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 439 aaaacaaaaatgatgaaaat 458
>ref|XM_724077.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01404) partial mRNA Length = 756 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 211 aaaacaaaaatgatgaaaat 230
>ref|XM_726198.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03296) partial mRNA Length = 2070 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatgaaaat 336 |||||||||| ||||||||||||| Sbjct: 1621 aaacaaaacacaaatgatgaaaat 1644
>ref|XM_671537.1| Plasmodium berghei strain ANKA hypothetical protein (PB000671.00.0) partial mRNA Length = 2268 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatgaaaat 336 ||||| |||||||||||||||||| Sbjct: 1624 aaacacaacaaaaatgatgaaaat 1647
>gb|AC164427.5| Mus musculus BAC clone RP23-189P17 from chromosome 19, complete sequence Length = 216510 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccagaatttgttatttatt 562 |||||||||||||||||||| Sbjct: 171037 gccagaatttgttatttatt 171018
>emb|Z82187.1|HS64F4 Human DNA sequence from clone CITF22-64F4 on chromosome 22, complete sequence Length = 27746 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatga 332 |||||||||||||||||||| Sbjct: 2351 aaacaaaacaaaaatgatga 2370
>emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the gene for werners helicase interacting protein (WHIP) (RUVBL), the SERPINB1 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1, a putative novel gene and the 3' end of a putative novel gene, complete sequence Length = 168147 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aaacaaaacaaaaatgatga 332 |||||||||||||||||||| Sbjct: 119347 aaacaaaacaaaaatgatga 119328
>emb|AL109653.14|HSBG115M3 Human DNA sequence from clone GS1-115M3 on chromosome Xq27.1-28 Contains gene KIAA1854 (containing FLJ38959) and a CpG island, complete sequence Length = 161341 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatga 332 |||||||||||||||||||| Sbjct: 60447 aaacaaaacaaaaatgatga 60466
>emb|AL034344.24|HS118B18 Human DNA sequence from clone RP1-118B18 on chromosome 6p24.1-25.3 Contains the FOXC1 gene for forkhead box C1 gene, the 3' end of the GMDS gene for GDP-mannose 4 6-dehydratase and four CpG Islands, complete sequence Length = 104729 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattcactccagaacagg 135 |||||||||||||||||||| Sbjct: 31724 tccattcactccagaacagg 31705
>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17, Complete Sequence, complete sequence Length = 163367 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tctaaacaaaacaaaaatga 329 |||||||||||||||||||| Sbjct: 137550 tctaaacaaaacaaaaatga 137531
>gb|AY034996.1| Arabidopsis thaliana putative pectinesterase (At3g10720) mRNA, complete cds Length = 1993 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatgaaaat 336 |||||||||||||| ||||||||| Sbjct: 18 aaacaaaacaaaaaggatgaaaat 41
>emb|BX548005.11| Zebrafish DNA sequence from clone DKEY-105A17 in linkage group 6, complete sequence Length = 218236 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tctaaacaaaacaaaaatga 329 |||||||||||||||||||| Sbjct: 155619 tctaaacaaaacaaaaatga 155600
>gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, complete sequence Length = 134882 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gacatggttttgccttgttg 496 |||||||||||||||||||| Sbjct: 45840 gacatggttttgccttgttg 45821
>gb|AC010023.6| Drosophila melanogaster 3L BAC RP98-19G23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161175 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 2125 aaaacaaaaatgatgaaaat 2106
>gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173782 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 26794 aaaacaaaaatgatgaaaat 26813
>gb|AY077832.1| Sheeppox virus 10700-99 strain TU-V02127, complete genome Length = 149955 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 tatgatatagcggaggaatt 599 |||||||||||||||||||| Sbjct: 145812 tatgatatagcggaggaatt 145793
>gb|AY077833.1| Sheeppox virus A, complete genome Length = 150057 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 tatgatatagcggaggaatt 599 |||||||||||||||||||| Sbjct: 145790 tatgatatagcggaggaatt 145771
>gb|AY077834.1| Sheeppox virus NISKHI, complete genome Length = 149662 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 tatgatatagcggaggaatt 599 |||||||||||||||||||| Sbjct: 145616 tatgatatagcggaggaatt 145597
>gb|AF409137.1| Lumpy skin disease virus NW-LW isolate Neethling Warmbaths LW, complete genome Length = 150793 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 tatgatatagcggaggaatt 599 |||||||||||||||||||| Sbjct: 146386 tatgatatagcggaggaatt 146367
>gb|AC116641.3| Homo sapiens BAC clone RP11-589D21 from 4, complete sequence Length = 15827 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aaacaaaacaaaaatgatga 332 |||||||||||||||||||| Sbjct: 2260 aaacaaaacaaaaatgatga 2241
>gb|AC079910.18| Homo sapiens 3 BAC RP11-418B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167434 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 145495 aaaacaaaaatgatgaaaat 145476
>gb|AC104513.8| Homo sapiens 3q BAC RP11-115O24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162500 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 111826 aaaacaaaaatgatgaaaat 111845
>ref|NM_168446.1| Drosophila melanogaster Mnf CG11799-RD, transcript variant D (Mnf), mRNA Length = 3195 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3156 aaaacaaaaatgatgaaaat 3175
>ref|NM_168445.1| Drosophila melanogaster Mnf CG11799-RC, transcript variant C (Mnf), mRNA Length = 3117 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3078 aaaacaaaaatgatgaaaat 3097
>ref|NM_168444.1| Drosophila melanogaster Mnf CG11799-RB, transcript variant B (Mnf), mRNA Length = 3320 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3281 aaaacaaaaatgatgaaaat 3300
>ref|NM_168443.1| Drosophila melanogaster Mnf CG11799-RA, transcript variant A (Mnf), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3192 aaaacaaaaatgatgaaaat 3211
>ref|NM_140183.1| Drosophila melanogaster Mnf CG11799-RE, transcript variant E (Mnf), mRNA Length = 3108 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3069 aaaacaaaaatgatgaaaat 3088
>gb|AC013452.9| Homo sapiens chromosome 15 clone RP11-325E5 map 15q21.1, complete sequence Length = 204745 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccagaatttgttatttatt 562 |||||||||||||||||||| Sbjct: 3517 gccagaatttgttatttatt 3498
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 aaccagtctaaacaaaacaaaaat 327 |||||||| ||||||||||||||| Sbjct: 64433 aaccagtcaaaacaaaacaaaaat 64410
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete sequence Length = 91863 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gtttcaactttcaagcaaaa 77 |||||||||||||||||||| Sbjct: 58931 gtttcaactttcaagcaaaa 58912
>gb|AF035225.1| Tomato dwarf leaf curl geminivirus pathogencity movement protein (BC1) and nuclear shuttle movement protein genes, partial cds Length = 1339 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 tatgggccagaatttgttat 557 |||||||||||||||||||| Sbjct: 1221 tatgggccagaatttgttat 1240
>gb|AY061212.1| Drosophila melanogaster LD16137 full length cDNA Length = 1646 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 1587 aaaacaaaaatgatgaaaat 1606
>gb|AF403738.1|AF403738 Culex nigripalpus baculovirus, complete genome Length = 108252 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ctaaacaaaacaaaaatgat 330 |||||||||||||||||||| Sbjct: 52072 ctaaacaaaacaaaaatgat 52053
>gb|BT023507.1| Drosophila melanogaster LD11294 full insert cDNA Length = 3235 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 3154 aaaacaaaaatgatgaaaat 3173
>gb|AC091073.3|AC091073 Homo sapiens chromosome 15 clone RP11-138E16 map 15q21.1, complete sequence Length = 194350 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccagaatttgttatttatt 562 |||||||||||||||||||| Sbjct: 154387 gccagaatttgttatttatt 154368
>ref|XM_623255.1| PREDICTED: Apis mellifera similar to hypothetical protein LOC235472 (LOC550865), mRNA Length = 3147 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ttcatcaaatccaccaaatc 438 |||||||||||||||||||| Sbjct: 2580 ttcatcaaatccaccaaatc 2599
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtgaagtttcaactttcaag 72 |||||||||||||||||||| Sbjct: 39660680 gtgaagtttcaactttcaag 39660699
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 aattcatcccgaccttataatcca 299 |||| ||||||||||||||||||| Sbjct: 120325 aattgatcccgaccttataatcca 120348
>gb|AC064871.6| Homo sapiens BAC clone RP11-598C21 from 2, complete sequence Length = 194197 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 aacaaaacaaaaatgatgaa 333 |||||||||||||||||||| Sbjct: 151876 aacaaaacaaaaatgatgaa 151895
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtgaagtttcaactttcaag 72 |||||||||||||||||||| Sbjct: 141636 gtgaagtttcaactttcaag 141655
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtgaagtttcaactttcaag 72 |||||||||||||||||||| Sbjct: 11579 gtgaagtttcaactttcaag 11598
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatga 332 |||||||||||||||||||| Sbjct: 309599 aaacaaaacaaaaatgatga 309618
>emb|AL844608.18| Mouse DNA sequence from clone RP23-27L22 on chromosome 2, complete sequence Length = 207035 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aaacaaaacaaaaatgatga 332 |||||||||||||||||||| Sbjct: 113546 aaacaaaacaaaaatgatga 113565
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cagtctaaacaaaacaaaaa 326 |||||||||||||||||||| Sbjct: 47635 cagtctaaacaaaacaaaaa 47616
>gb|AC002485.1|AC002485 Human PAC clone CTA-212D3, complete sequence Length = 215609 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gattcttaagtttatctgaa 277 |||||||||||||||||||| Sbjct: 123255 gattcttaagtttatctgaa 123236
>gb|AC005706.6|AC005706 Drosophila melanogaster, chromosome 2R, region 51D1-51D2, P1 clone DS04940, complete sequence Length = 72808 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 caaaacaaaaatgatgaaaa 335 |||||||||||||||||||| Sbjct: 31386 caaaacaaaaatgatgaaaa 31405
>gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, region 68A1-68B2, BAC clone BACR48O03, complete sequence Length = 173781 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 146988 aaaacaaaaatgatgaaaat 146969
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 aattcatcccgaccttataatcca 299 |||| ||||||||||||||||||| Sbjct: 60526 aattgatcccgaccttataatcca 60549
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 caaaacaaaaatgatgaaaa 335 |||||||||||||||||||| Sbjct: 82916 caaaacaaaaatgatgaaaa 82935
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 226193 aaaacaaaaatgatgaaaat 226174
>emb|AL954698.9| Zebrafish DNA sequence from clone CH211-233B16 in linkage group 6, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tctaaacaaaacaaaaatga 329 |||||||||||||||||||| Sbjct: 6773 tctaaacaaaacaaaaatga 6754
>gb|U83848.1|BTU83848 Bipartite tomato geminivirus coat protein (BV1) gene, partial cds Length = 250 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 tatgggccagaatttgttat 557 |||||||||||||||||||| Sbjct: 122 tatgggccagaatttgttat 141
>emb|AL928963.8| Mouse DNA sequence from clone RP23-5K9 on chromosome 2, complete sequence Length = 216315 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaaacaaaaatgatgaaaat 336 |||||||||||||||||||| Sbjct: 22863 aaaacaaaaatgatgaaaat 22882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,721,180 Number of Sequences: 3902068 Number of extensions: 6721180 Number of successful extensions: 294996 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 294603 Number of HSP's gapped (non-prelim): 393 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)