ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal12l13 |
|---|---|
| Clone Library Name | barley_pub |
>SYP61_ARATH (Q946Y7) Syntaxin-61 (AtSYP61) (Osmotic stress-sensitive mutant 1)| Length = 245 Score = 98.6 bits (244), Expect = 3e-21 Identities = 48/66 (72%), Positives = 57/66 (86%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMVMKKAG 231 +ELDELS SVQRIGGVGLTIH+EL QERI++ L EM++T NRL+FVQK+V MVMKKAG Sbjct: 161 EELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAG 220 Query: 230 IKGQIM 213 KGQ+M Sbjct: 221 AKGQMM 226
>STX5_CAEEL (P83528) Putative syntaxin C15C7.1| Length = 122 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/53 (37%), Positives = 32/53 (60%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVA 252 DEL+ + SV+ + G+ I +EL Q +L++L EME + RLD K++A Sbjct: 39 DELELVGNSVRTLRGMSSMIGDELDQQSTMLDDLGQEMEYSETRLDTAMKKMA 91
>SYP52_ARATH (Q94KK7) Syntaxin-52 (AtSYP52)| Length = 233 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/55 (32%), Positives = 36/55 (65%) Frame = -2 Query: 404 LDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMVMK 240 L++L +V + L ++EEL+ Q R++++L +++ T +RL VQK +A++ K Sbjct: 147 LEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNK 201
>SYP51_ARATH (Q9SA23) Syntaxin-51 (AtSYP51)| Length = 232 Score = 37.0 bits (84), Expect = 0.011 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = -2 Query: 404 LDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMVMK 240 L++L +V + L + EEL Q R++++L ++ T +RL VQK +A++ K Sbjct: 146 LEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKSLAVMNK 200
>FSV1_SCHPO (O14222) Syntaxin-like protein fsv1| Length = 247 Score = 36.2 bits (82), Expect = 0.019 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMVMKKA 234 + L + ASVQR +G ++ ELS Q +L+N++ + + R D + R+ V +KA Sbjct: 167 ESLGGIEASVQRQKRMGYAMNTELSEQNVLLDNMNNDADRIERRFDHAKNRLNKVSRKA 225
>STX6_RAT (Q63635) Syntaxin-6| Length = 255 Score = 34.7 bits (78), Expect = 0.055 Identities = 19/55 (34%), Positives = 34/55 (61%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMV 246 ++L+ +S S+ + + I EL Q +L++ S E+E+T +RLD V K++A V Sbjct: 171 EQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKV 225
>STX6_MOUSE (Q9JKK1) Syntaxin-6| Length = 255 Score = 34.7 bits (78), Expect = 0.055 Identities = 19/55 (34%), Positives = 34/55 (61%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMV 246 ++L+ +S S+ + + I EL Q +L++ S E+E+T +RLD V K++A V Sbjct: 171 EQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKV 225
>STX6_PONPY (Q5R6Q2) Syntaxin-6| Length = 255 Score = 34.3 bits (77), Expect = 0.072 Identities = 19/55 (34%), Positives = 33/55 (60%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMV 246 ++L+ +S S+ + + I EL Q +L + S E+E+T +RLD V K++A V Sbjct: 171 EQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKV 225
>STX6_HUMAN (O43752) Syntaxin-6| Length = 255 Score = 34.3 bits (77), Expect = 0.072 Identities = 19/55 (34%), Positives = 33/55 (60%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMV 246 ++L+ +S S+ + + I EL Q +L + S E+E+T +RLD V K++A V Sbjct: 171 EQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKV 225
>STX10_HUMAN (O60499) Syntaxin-10 (Syn10)| Length = 249 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/54 (31%), Positives = 33/54 (61%) Frame = -2 Query: 407 ELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMV 246 +L+ +S S+Q + + + EEL Q +L+ + EM+ T +R+D V +++A V Sbjct: 166 QLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKV 219
>RS8_OCEIH (Q8ETW9) 30S ribosomal protein S8| Length = 132 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = -2 Query: 401 DELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRL 276 D++ + ++RI GL ++ + R+LN L + + +TSN L Sbjct: 71 DKVISGIKRISKPGLRVYAKADEVPRVLNGLGIAIVSTSNGL 112
>HXA9_MOUSE (P09631) Homeobox protein Hox-A9 (Hox-1.7)| Length = 271 Score = 29.3 bits (64), Expect = 2.3 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 Query: 231 AGLLHHHRHPFLHKVEPVGSS 293 A + HHH HP++H PV ++ Sbjct: 80 AAVYHHHHHPYVHPQAPVAAA 100
>SOX8_HUMAN (P57073) Transcription factor SOX-8| Length = 446 Score = 28.9 bits (63), Expect = 3.0 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Frame = -1 Query: 312 PKPGDGNYFQQARLCAETG-GDGDEEGRHQGADHAHPLP 199 P PG G ++ AE G GDG G H G H P P Sbjct: 194 PHPGGGAVYK-----AEAGLGDGHHHGDHTGQTHGPPTP 227
>RS8_PROMT (Q46IS2) 30S ribosomal protein S8| Length = 133 Score = 28.9 bits (63), Expect = 3.0 Identities = 17/58 (29%), Positives = 33/58 (56%) Frame = -2 Query: 386 SVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIM 213 S+QR+ GL I++ G ++L L + + +TSN + + R A +K G+ G+++ Sbjct: 77 SMQRVSKPGLRIYKNTRGLPKVLGGLGIAIISTSNGV--MSDRDA---RKQGVGGEVL 129
>OLEO4_ARATH (Q42431) Oleosin 20.3 kDa (Oleosin type 4)| Length = 191 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = -2 Query: 341 LSGQERILNNLSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIM 213 LS +LN L +T +LD+ ++R+A + AG+KG+ M Sbjct: 119 LSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGMKGKEM 161
>AG35_VARV (P33062) Envelope protein (Protein H5)| Length = 221 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Frame = -1 Query: 357 YHT*RTVWTGKDPQQPKPGDGNYFQQARLCA--ETGGDGDEEGRHQGADHAHPLPGGSLH 184 YH +T P PG GN + ++ GD D + + + + G ++ Sbjct: 86 YH--QTTEENSPPPSSSPGVGNIVESVTAVELDDSNGDDDNDNDNDDNEPMVQVEAGKVN 143 Query: 183 YTLRSGLLDIAIYTTRI 133 ++ RS L D+ + T I Sbjct: 144 HSARSDLSDLKVATDNI 160
>CR034_MOUSE (Q8CDV0) Protein C18orf34 homolog| Length = 866 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = -2 Query: 407 ELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRV 255 ELD+LS T++ ++ G E +N + E ++T+N L+ ++K V Sbjct: 342 ELDKLSVLHAHYTTSIETVNLDIEGDEEAMNEVLRETQSTTNELENLKKTV 392
>LIMC_RHOER (Q9RA05) Carveol dehydrogenase (EC 1.1.1.275) ((+)-trans-carveol| dehydrogenase) (CDH) Length = 277 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = -2 Query: 410 DELDELSASVQRIGGVGLTIHEELSGQERILNNLSLEME---TTSNRLDFV 267 DELD+ + V+ +G + IH ++ R L +L+ E++ +T RLD V Sbjct: 53 DELDQTAKDVENLGRKAIVIHADV----RDLESLTAEVDRAVSTLGRLDIV 99
>PRPH_MESAU (P06680) Acidic proline-rich protein HP43A precursor| Length = 183 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Frame = -1 Query: 330 GKDPQQPKPGDGNYFQQARLCAETGGD-GDEEGR------HQGADHAHPLP 199 G+DP Q G + Q E G D G+E+G QG DH P P Sbjct: 32 GQDPGQLHQRPGQFPPQPSASDEEGDDDGEEDGNAPEGPPQQGGDHQKPRP 82
>HXA9_HUMAN (P31269) Homeobox protein Hox-A9 (Hox-1G)| Length = 272 Score = 27.7 bits (60), Expect = 6.8 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = +3 Query: 243 HHHRHPFLHKVEPVGSS 293 HHH HP++H PV ++ Sbjct: 85 HHHHHPYVHPQAPVAAA 101
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +1 Query: 133 YTSSIDCYVKKTRTKSIMKRTTRKRMSMICPLMPAFFITI 252 YT DC+V K + + + +++CP P FF T+ Sbjct: 101 YTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTL 140
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +1 Query: 133 YTSSIDCYVKKTRTKSIMKRTTRKRMSMICPLMPAFFITI 252 YT DC+V K + + + +++CP P FF T+ Sbjct: 97 YTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTL 136
>TLG1_SCHPO (Q9HGN3) t-SNARE affecting a late Golgi compartment protein 1| (Syntaxin tlg1) Length = 225 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -2 Query: 404 LDELSASVQRIGGVGLTIHEELSGQERILNNLSLEMETTSNRLDFVQKRV 255 LD + ++ I G + EEL Q +L+ L +ETT+++L KR+ Sbjct: 143 LDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKLRRGMKRL 192
>ASIP_RAT (Q99JA2) Agouti signaling protein precursor (ASP) (Agouti switch| protein) Length = 131 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -2 Query: 359 LTIHEELSGQERILNNLSLEMETTSNRLDFVQKRVAMVMKKA 234 LT+H L +E + ++ SL+ ++ N LDF + + KK+ Sbjct: 18 LTVHSHLVFEETLGDDRSLKSNSSINSLDFSSVSIVALNKKS 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,044,785 Number of Sequences: 219361 Number of extensions: 780145 Number of successful extensions: 2434 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2374 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2433 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
