ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105117.1| Zea mays PCO141701 mRNA sequence 244 3e-61
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
3dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
4dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
5dbj|AK104775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 3e-58
6dbj|AK065890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 3e-58
7dbj|AK063162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 3e-58
8dbj|AK059723.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 3e-58
9ref|NM_119571.2| Arabidopsis thaliana protein binding / ubiquiti... 48 0.040
10emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, ... 48 0.040
11emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, B... 48 0.040
12dbj|AK118311.1| Arabidopsis thaliana At4g34100 mRNA for unknown ... 48 0.040
13gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete s... 46 0.16
14gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete se... 46 0.16
15gb|AC164070.5| Mus musculus chromosome 7, clone RP24-292L1, comp... 44 0.63
16gb|AC102524.11| Mus musculus chromosome 7, clone RP24-75A18, com... 44 0.63
17gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's ... 44 0.63
18dbj|AP004237.1| Proteus vulgaris plasmid Rts1 DNA, complete sequ... 44 0.63
19ref|XM_659127.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 2.5
20gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, com... 42 2.5
21gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, com... 42 2.5
22gb|AC169384.2| Mus musculus chromosome 5, clone RP23-231C16, com... 42 2.5
23ref|XM_638349.1| Dictyostelium discoideum adhesion modulation pr... 40 9.8
24ref|NM_192504.1| Oryza sativa (japonica cultivar-group), predic... 40 9.8
25gb|AC102223.9| Mus musculus chromosome 1, clone RP24-296E23, com... 40 9.8
26ref|XM_362213.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.8
27gb|AY368388.1| Thelymitra sp. Chase O-489 maturase K-like (matK)... 40 9.8
28ref|XM_856538.1| PREDICTED: Canis familiaris similar to ADP-ribo... 40 9.8
29ref|XM_856509.1| PREDICTED: Canis familiaris similar to ADP-ribo... 40 9.8
30ref|XM_845408.1| PREDICTED: Canis familiaris similar to ADP-ribo... 40 9.8
31ref|XM_538387.2| PREDICTED: Canis familiaris similar to ADP-ribo... 40 9.8
32gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.8
33gb|AC163327.2| Mus musculus chromosome 1, clone RP24-297J20, com... 40 9.8
34gb|AC142209.3| Homo sapiens chromosome 5 clone XXyac-ICRF4X137E6... 40 9.8
35gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosom... 40 9.8
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
37emb|BX828852.1|CNS0A2KC Arabidopsis thaliana Full-length cDNA Co... 40 9.8
38gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complem... 40 9.8
39dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
40dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
41dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
42dbj|AK072645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
43dbj|AK072283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
44emb|CT025623.13| Mouse DNA sequence from clone RP23-397E11 on ch... 40 9.8
45emb|AJ310077.1|TIX310077 Thelymitra ixioides chloroplast matK ps... 40 9.8
46emb|AJ310076.1|TCA310076 Thelymitra carnea chloroplast matK pseu... 40 9.8
47emb|AJ310002.1|CCA310002 Calochilus campestris chloroplast matK ... 40 9.8
48emb|AL606863.15| Mouse DNA sequence from clone RP23-37J4 on chro... 40 9.8 
>gb|AY105117.1| Zea mays PCO141701 mRNA sequence
          Length = 1381

 Score =  244 bits (123), Expect = 3e-61
 Identities = 210/239 (87%)
 Strand = Plus / Minus

                                                                       
Query: 446 gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
           ||||||||||||||||||||||||||||| ||||| |||||||| || || ||||| || 
Sbjct: 919 gagtcctcgccaaagttgtgcagcctccgcccaatcagatagcggtcatccctgatagag 860

                                                                       
Query: 506 ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
           |||||||||||||||||||||||||| || || ||||| || |||||||| | |||||| 
Sbjct: 859 ttgtggaggttggtgaaccagacatgaaatctcttgccccaaaagaagagggcgctgaag 800

                                                                       
Query: 566 atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
           |||| ||  |||||||||||||| ||||| || ||||||||||| || |||||||| |||
Sbjct: 799 atcaggcttccaagccaggcaaaccggtacaccgctgagttcacgatgagtgggtaaccc 740

                                                                      
Query: 626 agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagctt 684
           |||| |||||| |  |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 739 agcaacgggaagatgccccttgcaaggacgtatgggacacagagagcagtaaggagctt 681
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Plus

                                                                            
Query: 446      gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
                |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 25584937 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 25584996

                                                                            
Query: 506      ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
                |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 25584997 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 25585056

                                                                            
Query: 566      atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
                |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 25585057 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 25585116

                                                                            
Query: 626      agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
                ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 25585117 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 25585176

                                              
Query: 686      gtgatgatgggggttatgatttcgtgcagg 715
                ||||  || ||  |||||||||| ||||||
Sbjct: 25585177 gtgacaataggcattatgatttcatgcagg 25585206
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>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0523F01
          Length = 146419

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Plus

                                                                          
Query: 446    gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
              |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 103254 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 103313

                                                                          
Query: 506    ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
              |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 103314 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 103373

                                                                          
Query: 566    atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
              |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 103374 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 103433

                                                                          
Query: 626    agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
              ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 103434 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 103493

                                            
Query: 686    gtgatgatgggggttatgatttcgtgcagg 715
              ||||  || ||  |||||||||| ||||||
Sbjct: 103494 gtgacaataggcattatgatttcatgcagg 103523
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0458E02
          Length = 154458

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Plus

                                                                        
Query: 446  gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
            |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 8382 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 8441

                                                                        
Query: 506  ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
            |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 8442 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 8501

                                                                        
Query: 566  atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
            |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 8502 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 8561

                                                                        
Query: 626  agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
            ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 8562 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 8621

                                          
Query: 686  gtgatgatgggggttatgatttcgtgcagg 715
            ||||  || ||  |||||||||| ||||||
Sbjct: 8622 gtgacaataggcattatgatttcatgcagg 8651
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>dbj|AK104775.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B08, full
           insert sequence
          Length = 1237

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Minus

                                                                       
Query: 446 gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
           |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 665 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 606

                                                                       
Query: 506 ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
           |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 605 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 546

                                                                       
Query: 566 atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
           |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 545 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 486

                                                                       
Query: 626 agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
           ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 485 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 426

                                         
Query: 686 gtgatgatgggggttatgatttcgtgcagg 715
           ||||  || ||  |||||||||| ||||||
Sbjct: 425 gtgacaataggcattatgatttcatgcagg 396
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>dbj|AK065890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043L16, full
           insert sequence
          Length = 1222

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Minus

                                                                       
Query: 446 gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
           |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 767 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 708

                                                                       
Query: 506 ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
           |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 707 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 648

                                                                       
Query: 566 atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
           |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 647 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 588

                                                                       
Query: 626 agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
           ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 587 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 528

                                         
Query: 686 gtgatgatgggggttatgatttcgtgcagg 715
           ||||  || ||  |||||||||| ||||||
Sbjct: 527 gtgacaataggcattatgatttcatgcagg 498
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>dbj|AK063162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D07, full
           insert sequence
          Length = 878

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Minus

                                                                       
Query: 446 gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
           |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 561 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 502

                                                                       
Query: 506 ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
           |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 501 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 442

                                                                       
Query: 566 atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
           |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 441 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 382

                                                                       
Query: 626 agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
           ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 381 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 322

                                         
Query: 686 gtgatgatgggggttatgatttcgtgcagg 715
           ||||  || ||  |||||||||| ||||||
Sbjct: 321 gtgacaataggcattatgatttcatgcagg 292
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>dbj|AK059723.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-A08, full
           insert sequence
          Length = 1237

 Score =  234 bits (118), Expect = 3e-58
 Identities = 232/270 (85%)
 Strand = Plus / Minus

                                                                       
Query: 446 gagtcctcgccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaa 505
           |||||||| |||||||||||||||||||| ||||| ||||| || || || || || |||
Sbjct: 665 gagtcctcaccaaagttgtgcagcctccgcccaatcagataacggtcatccctaatggaa 606

                                                                       
Query: 506 ttgtggaggttggtgaaccagacatggaaccttttgccacagaagaagagcgtgctgaat 565
           |||||||| ||||||||||| |||||||| || |||||||||||||| |||| |||||||
Sbjct: 605 ttgtggagattggtgaaccaaacatggaatctcttgccacagaagaacagcgcgctgaat 546

                                                                       
Query: 566 atcaagcagccaagccaggcaaaacggtaaactgctgagttcacaatcagtgggtagccc 625
           |||| |||||||||||| || |||||||| || |||||||||||||| |||||||| || 
Sbjct: 545 atcaggcagccaagccacgcgaaacggtagaccgctgagttcacaatgagtgggtaacca 486

                                                                       
Query: 626 agcaccgggaacacaccccttgcaaggacgtatgggacacatagagcagtaaggagcttc 685
           ||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||||||| 
Sbjct: 485 agcactgggaagacaccccttgcaagaacatatggaacgcagagagctgtaaggagcttg 426

                                         
Query: 686 gtgatgatgggggttatgatttcgtgcagg 715
           ||||  || ||  |||||||||| ||||||
Sbjct: 425 gtgacaataggcattatgatttcatgcagg 396
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>ref|NM_119571.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT4G34100 mRNA, complete cds
          Length = 3279

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                        
Query: 455  ccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggagg 514
            |||||||| ||||| ||||| ||||||||||| || || || | ||| || ||||| |||
Sbjct: 3149 ccaaagttatgcagtctccgaccaatgagataacggtcatcacggatagagttgtgaagg 3090

                                                
Query: 515  ttggtgaaccagacatggaaccttttgccacagaag 550
            ||  | |||||||||||| | |||||  ||||||||
Sbjct: 3089 tttctaaaccagacatggcatctttttgcacagaag 3054
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>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
          Length = 192861

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                          
Query: 455    ccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggagg 514
              |||||||| ||||| ||||| ||||||||||| || || || | ||| || ||||| |||
Sbjct: 168292 ccaaagttatgcagtctccgaccaatgagataacggtcatcacggatagagttgtgaagg 168233

                                                  
Query: 515    ttggtgaaccagacatggaaccttttgccacagaag 550
              ||  | |||||||||||| | |||||  ||||||||
Sbjct: 168232 tttctaaaccagacatggcatctttttgcacagaag 168197
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>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project)
          Length = 94091

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                         
Query: 455   ccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggagg 514
             |||||||| ||||| ||||| ||||||||||| || || || | ||| || ||||| |||
Sbjct: 38243 ccaaagttatgcagtctccgaccaatgagataacggtcatcacggatagagttgtgaagg 38184

                                                 
Query: 515   ttggtgaaccagacatggaaccttttgccacagaag 550
             ||  | |||||||||||| | |||||  ||||||||
Sbjct: 38183 tttctaaaccagacatggcatctttttgcacagaag 38148
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>dbj|AK118311.1| Arabidopsis thaliana At4g34100 mRNA for unknown protein, complete
           cds, clone: RAFL19-59-G05
          Length = 638

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                       
Query: 455 ccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggagg 514
           |||||||| ||||| ||||| ||||||||||| || || || | ||| || ||||| |||
Sbjct: 335 ccaaagttatgcagtctccgaccaatgagataacggtcatcacggatagagttgtgaagg 276

                                               
Query: 515 ttggtgaaccagacatggaaccttttgccacagaag 550
           ||  | |||||||||||| | |||||  ||||||||
Sbjct: 275 tttctaaaccagacatggcatctttttgcacagaag 240
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>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence
          Length = 112369

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 458   aagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggaggttg 517
             ||||| |||| |||||||||||| ||||| || || || |  |||||||||||||| || 
Sbjct: 63914 aagttatgcaacctccggccaatcagataccggtcatcacgaattgaattgtggagattt 63973

                        
Query: 518   gtgaaccagac 528
             || ||||||||
Sbjct: 63974 gtaaaccagac 63984
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>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence
          Length = 141776

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 458  aagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggaggttg 517
            ||||| |||| |||||||||||| ||||| || || || |  |||||||||||||| || 
Sbjct: 6942 aagttatgcaacctccggccaatcagataccggtcatcacgaattgaattgtggagattt 7001

                       
Query: 518  gtgaaccagac 528
            || ||||||||
Sbjct: 7002 gtaaaccagac 7012
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>gb|AC164070.5| Mus musculus chromosome 7, clone RP24-292L1, complete sequence
          Length = 200080

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 568    caagcagccaagccaggcaaaa 589
              ||||||||||||||||||||||
Sbjct: 115673 caagcagccaagccaggcaaaa 115652
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>gb|AC102524.11| Mus musculus chromosome 7, clone RP24-75A18, complete sequence
          Length = 193924

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 568    caagcagccaagccaggcaaaa 589
              ||||||||||||||||||||||
Sbjct: 119704 caagcagccaagccaggcaaaa 119683
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>gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 246913

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 568   caagcagccaagccaggcaaaa 589
             ||||||||||||||||||||||
Sbjct: 41380 caagcagccaagccaggcaaaa 41401
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>dbj|AP004237.1| Proteus vulgaris plasmid Rts1 DNA, complete sequence
          Length = 217182

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 328    gttgttacccctgaacctcagc 349
              ||||||||||||||||||||||
Sbjct: 163782 gttgttacccctgaacctcagc 163803
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>ref|XM_659127.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6615.2), mRNA
          Length = 5844

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 351  caatgtcgtcgtcgtcctcat 371
            |||||||||||||||||||||
Sbjct: 5083 caatgtcgtcgtcgtcctcat 5063
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>gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, complete sequence
          Length = 193682

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   gcaggaaccaaaaaagaaagg 142
             |||||||||||||||||||||
Sbjct: 86534 gcaggaaccaaaaaagaaagg 86554
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>gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, complete sequence
          Length = 199782

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    gcaggaaccaaaaaagaaagg 142
              |||||||||||||||||||||
Sbjct: 147113 gcaggaaccaaaaaagaaagg 147133
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>gb|AC169384.2| Mus musculus chromosome 5, clone RP23-231C16, complete sequence
          Length = 204569

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 122  gcaggaaccaaaaaagaaagg 142
            |||||||||||||||||||||
Sbjct: 8175 gcaggaaccaaaaaagaaagg 8195
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>ref|XM_638349.1| Dictyostelium discoideum adhesion modulation protein A
           (DDB0185088), partial mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  tacacattacatcagaacaa 64
           ||||||||||||||||||||
Sbjct: 676 tacacattacatcagaacaa 657
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>ref|NM_192504.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 cttcatcagcatgccggttg 331
           ||||||||||||||||||||
Sbjct: 739 cttcatcagcatgccggttg 720
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>gb|AC102223.9| Mus musculus chromosome 1, clone RP24-296E23, complete sequence
          Length = 182165

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 567   tcaagcagccaagccaggcaaaac 590
             |||||||||||||||||| |||||
Sbjct: 94385 tcaagcagccaagccagggaaaac 94362
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>ref|XM_362213.1| Magnaporthe grisea 70-15 hypothetical protein (MG04658.4) partial
           cds
          Length = 1707

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 357 cgtcgtcgtcctcatgatctagag 380
           |||||||| |||||||||||||||
Sbjct: 589 cgtcgtcgacctcatgatctagag 566
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>gb|AY368388.1| Thelymitra sp. Chase O-489 maturase K-like (matK) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 1799

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ggaaccaaaaaagaaaggca 144
           ||||||||||||||||||||
Sbjct: 45  ggaaccaaaaaagaaaggca 26
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>ref|XM_856538.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor
           binding protein GGA1 (Golgi-localized, gamma
           ear-containing, ARF-binding protein 1) (Gamma-adaptin
           related protein 1), transcript variant 4 (LOC481266),
           mRNA
          Length = 2244

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 528 catggaaccttttgccacag 547
           ||||||||||||||||||||
Sbjct: 554 catggaaccttttgccacag 535
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>ref|XM_856509.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor
           binding protein GGA1 (Golgi-localized, gamma
           ear-containing, ARF-binding protein 1) (Gamma-adaptin
           related protein 1), transcript variant 3 (LOC481266),
           mRNA
          Length = 1965

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 528 catggaaccttttgccacag 547
           ||||||||||||||||||||
Sbjct: 554 catggaaccttttgccacag 535
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>ref|XM_845408.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor
           binding protein GGA1 (Golgi-localized, gamma
           ear-containing, ARF-binding protein 1) (Gamma-adaptin
           related protein 1), transcript variant 2 (LOC481266),
           mRNA
          Length = 1989

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 528 catggaaccttttgccacag 547
           ||||||||||||||||||||
Sbjct: 317 catggaaccttttgccacag 298
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>ref|XM_538387.2| PREDICTED: Canis familiaris similar to ADP-ribosylation factor
           binding protein GGA1 (Golgi-localized, gamma
           ear-containing, ARF-binding protein 1) (Gamma-adaptin
           related protein 1), transcript variant 1 (LOC481266),
           mRNA
          Length = 2226

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 528 catggaaccttttgccacag 547
           ||||||||||||||||||||
Sbjct: 554 catggaaccttttgccacag 535
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>gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-382G13, complete
             sequence
          Length = 142667

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 410   cctggagtctcatcagtagg 429
             ||||||||||||||||||||
Sbjct: 31805 cctggagtctcatcagtagg 31824
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>gb|AC163327.2| Mus musculus chromosome 1, clone RP24-297J20, complete sequence
          Length = 136606

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   tgggtagcccagcaccggga 635
             ||||||||||||||||||||
Sbjct: 78205 tgggtagcccagcaccggga 78186
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>gb|AC142209.3| Homo sapiens chromosome 5 clone XXyac-ICRF4X137E6, complete sequence
          Length = 38959

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 499  gattgaattgtggaggttgg 518
            ||||||||||||||||||||
Sbjct: 7299 gattgaattgtggaggttgg 7318
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>gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosome 12, complete sequence
          Length = 220129

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    tgaaccagacatggaacctt 538
              ||||||||||||||||||||
Sbjct: 189160 tgaaccagacatggaacctt 189179
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 312      cttcatcagcatgccggttg 331
                ||||||||||||||||||||
Sbjct: 27082533 cttcatcagcatgccggttg 27082552



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 187      attcccctttctactatgtg 206
                ||||||||||||||||||||
Sbjct: 14581440 attcccctttctactatgtg 14581421
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>emb|BX828852.1|CNS0A2KC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL44ZD03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 581

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 77/96 (80%)
 Strand = Plus / Minus

                                                                       
Query: 455 ccaaagttgtgcagcctccggccaatgagatagcgatcgtctctgattgaattgtggagg 514
           |||||||| |||||  |||| ||||||||||| || || || | ||| || ||||| |||
Sbjct: 241 ccaaagttatgcagtttccgaccaatgagataacggtcatcacggatagagttgtgaagg 182

                                               
Query: 515 ttggtgaaccagacatggaaccttttgccacagaag 550
           ||  | |||||||||||| | |||||  ||||||||
Sbjct: 181 tttctaaaccagacatggcatctttttgcacagaag 146
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>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614)
             strain AX4, complete sequence
          Length = 182870

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tacacattacatcagaacaa 64
             ||||||||||||||||||||
Sbjct: 84377 tacacattacatcagaacaa 84396
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>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0671D01
          Length = 163006

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cttcatcagcatgccggttg 331
              ||||||||||||||||||||
Sbjct: 141364 cttcatcagcatgccggttg 141383
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>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   attcccctttctactatgtg 206
             ||||||||||||||||||||
Sbjct: 62817 attcccctttctactatgtg 62798
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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0514H03
          Length = 167230

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    attcccctttctactatgtg 206
              ||||||||||||||||||||
Sbjct: 140753 attcccctttctactatgtg 140734
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>dbj|AK072645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B07, full
           insert sequence
          Length = 1576

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 cttcatcagcatgccggttg 331
           ||||||||||||||||||||
Sbjct: 509 cttcatcagcatgccggttg 490
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>dbj|AK072283.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016B15, full
           insert sequence
          Length = 1862

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 cttcatcagcatgccggttg 331
           ||||||||||||||||||||
Sbjct: 855 cttcatcagcatgccggttg 836
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>emb|CT025623.13| Mouse DNA sequence from clone RP23-397E11 on chromosome 12, complete
              sequence
          Length = 205791

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    tgaaccagacatggaacctt 538
              ||||||||||||||||||||
Sbjct: 195142 tgaaccagacatggaacctt 195123
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>emb|AJ310077.1|TIX310077 Thelymitra ixioides chloroplast matK pseudogene
          Length = 1196

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ggaaccaaaaaagaaaggca 144
           ||||||||||||||||||||
Sbjct: 45  ggaaccaaaaaagaaaggca 26
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>emb|AJ310076.1|TCA310076 Thelymitra carnea chloroplast matK pseudogene
          Length = 1797

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ggaaccaaaaaagaaaggca 144
           ||||||||||||||||||||
Sbjct: 45  ggaaccaaaaaagaaaggca 26
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>emb|AJ310002.1|CCA310002 Calochilus campestris chloroplast matK pseudogene
          Length = 1795

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ggaaccaaaaaagaaaggca 144
           ||||||||||||||||||||
Sbjct: 45  ggaaccaaaaaagaaaggca 26
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>emb|AL606863.15| Mouse DNA sequence from clone RP23-37J4 on chromosome 1, complete
             sequence
          Length = 175099

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 567   tcaagcagccaagccaggcaaaac 590
             |||||||||||||||||| |||||
Sbjct: 44774 tcaagcagccaagccagggaaaac 44751


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,483,472
Number of Sequences: 3902068
Number of extensions: 5483472
Number of successful extensions: 124488
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124285
Number of HSP's gapped (non-prelim): 203
length of query: 715
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 692
effective length of database: 17,143,297,704
effective search space: 11863162011168
effective search space used: 11863162011168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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