>ref|NM_190777.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2286

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 475  accatttctctccggaattctagctccctcgtgaatagatcaa 517
            ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 2084 accatctccctccggaattctagttccctcgtgaattgatcaa 2042

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 475      accatttctctccggaattctagctccctcgtgaatagatcaa 517
                ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 37648983 accatctccctccggaattctagttccctcgtgaattgatcaa 37649025

>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 475    accatttctctccggaattctagctccctcgtgaatagatcaa 517
              ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 109457 accatctccctccggaattctagttccctcgtgaattgatcaa 109499

>dbj|AK121602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041A14, full
            insert sequence
          Length = 2731

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 475  accatttctctccggaattctagctccctcgtgaatagatcaa 517
            ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 2478 accatctccctccggaattctagttccctcgtgaattgatcaa 2436

>dbj|AK068777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159O06, full
            insert sequence
          Length = 2135

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 475  accatttctctccggaattctagctccctcgtgaatagatcaa 517
            ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 1852 accatctccctccggaattctagttccctcgtgaattgatcaa 1810

>emb|AL118523.18|HSJ1031J8 Human DNA sequence from clone RP5-1031J8 on chromosome 20 Contains a
              putative novel gene, STSs and GSSs, complete sequence
          Length = 155213

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 112    attctagtcccacccatcttct 133
              ||||||||||||||||||||||
Sbjct: 130622 attctagtcccacccatcttct 130643

>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete
              sequence
          Length = 194408

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    tacaactgtacaaaaaactgt 251
              |||||||||||||||||||||
Sbjct: 129195 tacaactgtacaaaaaactgt 129215

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 439     cccatcgctccttcaccaag 458
               ||||||||||||||||||||
Sbjct: 3609555 cccatcgctccttcaccaag 3609574

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 439     cccatcgctccttcaccaag 458
               ||||||||||||||||||||
Sbjct: 3609724 cccatcgctccttcaccaag 3609743

>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184967

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ctggaagcttttgcggggag 373
              ||||||||||||||||||||
Sbjct: 161425 ctggaagcttttgcggggag 161444

>ref|XM_673402.1| Plasmodium berghei strain ANKA hypothetical protein (PB000133.02.0)
           partial mRNA
          Length = 1980

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 gagatgatactacaaataaa 169
           ||||||||||||||||||||
Sbjct: 692 gagatgatactacaaataaa 711

>emb|AJ616006.1| Bacillus licheniformis yvhJ gene (partial), yvyE gene, degS gene,
            degU gene, yviA gene and comFA gene (partial)
          Length = 4550

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  cccatcgctccttcaccaag 458
            ||||||||||||||||||||
Sbjct: 4107 cccatcgctccttcaccaag 4088

>emb|CR861175.1| Pongo pygmaeus mRNA; cDNA DKFZp459L0816 (from clone DKFZp459L0816)
          Length = 2206

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  aatttactatgtgtactcct 90
           ||||||||||||||||||||
Sbjct: 568 aatttactatgtgtactcct 587

>gb|AF459920.1| Bacillus licheniformis hypothetical protein YviA (yviA), late
           competence protein ComFA (comFA), late competence
           protein ComFB (comFB), and late competence protein ComFC
           (comFC) genes, complete cds
          Length = 3630

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 439 cccatcgctccttcaccaag 458
           ||||||||||||||||||||
Sbjct: 986 cccatcgctccttcaccaag 967

>gb|AC092468.9| Homo sapiens 3 BAC RP11-326J18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114428

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   tgtctgcctggaagcttttg 366
             ||||||||||||||||||||
Sbjct: 60283 tgtctgcctggaagcttttg 60264

>gb|AC016604.6| Homo sapiens chromosome 5 clone CTD-2150I21, complete sequence
          Length = 94147

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   aacacaacgcctcacactac 278
             ||||||||||||||||||||
Sbjct: 14601 aacacaacgcctcacactac 14582

>gb|AC016635.8| Homo sapiens chromosome 5 clone RP11-313I12, complete sequence
          Length = 163536

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   aacacaacgcctcacactac 278
             ||||||||||||||||||||
Sbjct: 59790 aacacaacgcctcacactac 59809

>gb|AC008926.8| Homo sapiens chromosome 5 clone CTD-2285N11, complete sequence
          Length = 104088

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  aacacaacgcctcacactac 278
            ||||||||||||||||||||
Sbjct: 1812 aacacaacgcctcacactac 1831

>emb|CR381582.9| Zebrafish DNA sequence from clone DKEY-28M3 in linkage group 18,
             complete sequence
          Length = 215124

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tctagtcccacccatcttct 133
             ||||||||||||||||||||
Sbjct: 85253 tctagtcccacccatcttct 85272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,661,789
Number of Sequences: 3902068
Number of extensions: 3661789
Number of successful extensions: 55427
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55347
Number of HSP's gapped (non-prelim): 80
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)