ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal12k04 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 165 bits (418), Expect = 9e-41 Identities = 76/142 (53%), Positives = 103/142 (72%) Frame = -3 Query: 622 IFMGLMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSF 443 I L++NPPK GD SY Y AE IL+SL RRA+ + D FN+ + CN EGAMY F Sbjct: 341 ILASLVMNPPKVGDESYAAYKAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLF 400 Query: 442 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 263 PQI LP++A++ AK+A K PD +Y L+LLE+TGI VPGSGFGQ G +H+R TILP E+ Sbjct: 401 PQIHLPKKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHIRCTILPQED 460 Query: 262 DMPAIMSSFKKFNDSFMDQYQD 197 +PA+++ FK F+++FM +Y+D Sbjct: 461 KIPAVITRFKAFHEAFMAEYRD 482
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 159 bits (402), Expect = 6e-39 Identities = 75/142 (52%), Positives = 97/142 (68%) Frame = -3 Query: 622 IFMGLMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSF 443 I L++NPPK D SY Y AE IL SL RRA+ + FN + CN EGAMY F Sbjct: 341 ILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVF 400 Query: 442 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 263 PQI LPQ+A++ AK+A K PD +Y L+LLE+TGI VPGSGFGQ G +H R TILP E+ Sbjct: 401 PQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQED 460 Query: 262 DMPAIMSSFKKFNDSFMDQYQD 197 +PA++S F F+++FM +Y+D Sbjct: 461 KIPAVISRFTVFHEAFMSEYRD 482
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 132 bits (332), Expect = 8e-31 Identities = 59/138 (42%), Positives = 91/138 (65%) Frame = -3 Query: 616 MGLMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQ 437 + L+V+PP P D S+ ++ AE +++L L +A++ FN + CN +GAMYSFP+ Sbjct: 357 LDLVVSPPAPTDPSFAQFQAEKQAVLAELAAKAKLTEQVFNEAPGISCNPVQGAMYSFPR 416 Query: 436 IRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDM 257 ++LP RA++ A+ G PD+++CL+LLE TGI VPGSGFGQ+EG +H R TILP E + Sbjct: 417 VQLPPRAVERAQELGLAPDMFFCLRLLEETGICVVPGSGFGQREGTYHFRMTILPPLEKL 476 Query: 256 PAIMSSFKKFNDSFMDQY 203 ++ +F+ F +Y Sbjct: 477 RLLLEKLSRFHAKFTLEY 494
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 132 bits (331), Expect = 1e-30 Identities = 60/138 (43%), Positives = 89/138 (64%) Frame = -3 Query: 616 MGLMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQ 437 MG++V+PP P + S+ ++ AE + +L L +A++ FN + CN +GAMYSFPQ Sbjct: 357 MGMVVSPPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQ 416 Query: 436 IRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDM 257 I+LP +A+ A+ G PD+++CL LLE TGI VPGSGFGQ+EG +H R TILP E + Sbjct: 417 IQLPLKAVQRAQDLGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKL 476 Query: 256 PAIMSSFKKFNDSFMDQY 203 ++ + F+ F +Y Sbjct: 477 RVLLEKLRHFHAKFTHEY 494
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 127 bits (320), Expect = 2e-29 Identities = 58/138 (42%), Positives = 87/138 (63%) Frame = -3 Query: 616 MGLMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQ 437 M ++V+PP P + S+ ++ AE + +L L +A++ FN + CN +GAMYSFPQ Sbjct: 357 MDMVVSPPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQ 416 Query: 436 IRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDM 257 ++LP +A+ A+ G PD+++CL LLE TGI VPGSGFGQ+EG +H R TILP E + Sbjct: 417 VQLPLKAVQRAQELGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKL 476 Query: 256 PAIMSSFKKFNDSFMDQY 203 ++ F+ F +Y Sbjct: 477 RLLLEKLSHFHAKFTHEY 494
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 119 bits (297), Expect = 9e-27 Identities = 63/138 (45%), Positives = 83/138 (60%) Frame = -3 Query: 610 LMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIR 431 LMV PP G+ S+ AE SI E L RA + + FNS + C +GAMY FP+I Sbjct: 458 LMVRPPVEGEESFESDQAERNSIHEKLITRAMTLYETFNSLEGIECQKPQGAMYLFPKID 517 Query: 430 LPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPA 251 LP +A+ A+ PD +YC KLLE+TGI TVPGSGFGQ+ G +HLRTT L + Sbjct: 518 LPFKAVQEARHLELTPDEFYCKKLLESTGICTVPGSGFGQEPGTYHLRTTFLAPGLEW-- 575 Query: 250 IMSSFKKFNDSFMDQYQD 197 + ++ F+ F DQY+D Sbjct: 576 -IKKWESFHKEFFDQYRD 592
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 117 bits (293), Expect = 3e-26 Identities = 57/138 (41%), Positives = 84/138 (60%) Frame = -3 Query: 610 LMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIR 431 LMV PP+PGD SY + E I +R RA ++ + F + C +GAMY FP++ Sbjct: 373 LMVKPPQPGDESYEQDHDERLKIFHEMRTRANLLYETFKELEGIECQKPQGAMYLFPRLV 432 Query: 430 LPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPA 251 LP++A+ ++ G EPD +YC LLE+TGI TVPGSGFGQ+ G +H+RTT L Sbjct: 433 LPKKALCESERLGIEPDEFYCTSLLESTGICTVPGSGFGQRPGTYHVRTTFLAPGTKW-- 490 Query: 250 IMSSFKKFNDSFMDQYQD 197 + +K+F+ F +Y++ Sbjct: 491 -IQDWKEFHQDFFSKYRN 507
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 103 bits (257), Expect = 4e-22 Identities = 53/141 (37%), Positives = 82/141 (58%) Frame = -3 Query: 622 IFMGLMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSF 443 + + ++VNPPKPGD SY + E I E+LR + + + +G + V C GAMY Sbjct: 368 LLVDMLVNPPKPGDPSYDLFIKEVDEIHEALRLQCRQLYEGTKRMKRVSCLEPHGAMYLH 427 Query: 442 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 263 P + LP++ + AK+ +PD +Y ++LL+ +GI VPGSGFGQ EG +H+R T L Sbjct: 428 PSVSLPEKLITTAKAQKIQPDEFYAIELLKRSGICVVPGSGFGQPEGDYHIRITFLAKGT 487 Query: 262 DMPAIMSSFKKFNDSFMDQYQ 200 + + F K ++ MD Y+ Sbjct: 488 E---YIERFVKAHNEIMDLYE 505
>AATB2_RHIME (Q06191) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Frame = -3 Query: 550 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDV 377 K ES +RR ++ +G N+ + C EGA Y+F R + +GK E D Sbjct: 302 KERTESFQRRRNLVVNGLNAIEGLDCRVPEGAFYTFSGCAGVARRV---TPSGKRIESDT 358 Query: 376 YYCLKLLEATGISTVPGSGFG 314 +C LLE + ++ VPGS FG Sbjct: 359 DFCAYLLEDSHVAVVPGSAFG 379
>AAT_SULTO (Q972A2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 399 Score = 45.8 bits (107), Expect = 1e-04 Identities = 30/115 (26%), Positives = 54/115 (46%) Frame = -3 Query: 556 ESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDV 377 E K ++ ++R IM + + + + ++GA Y FP I ++ K A Sbjct: 290 EVKEMISLFKKRRDIMYEELKKIKGIQVHKSQGAFYMFPFIG------EILKKANLSVKD 343 Query: 376 YYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 212 + LKL+E G++T+PG F + G +R + E+D+ + K+F D M Sbjct: 344 F-SLKLIEEKGVTTIPGEVFPLEVGKDFVRLSFAVKEDDIREGIKRMKEFIDMLM 397
>AATB1_RHIME (P58350) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 43.5 bits (101), Expect = 5e-04 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -3 Query: 550 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDV 377 K ES +RR ++ +G N+ + C EGA Y+F + +GK + D Sbjct: 302 KERTESFQRRRDLVVNGLNAIDGLDCRVPEGAFYTFSGC---AGVLGKVTPSGKRIKTDT 358 Query: 376 YYCLKLLEATGISTVPGSGFG 314 +C LLE ++ VPGS FG Sbjct: 359 DFCAYLLEDAHVAVVPGSAFG 379
>AAT_RHILP (O86459) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 400 Score = 40.0 bits (92), Expect = 0.006 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = -3 Query: 556 ESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EP 383 E+K I E R ++ N + +VC EGA Y +P + + +GK E Sbjct: 293 ENKKIFEG---RRDLVVSMLNQAKGIVCPVPEGAFYVYPSCK---GLIGKTAPSGKVIET 346 Query: 382 DVYYCLKLLEATGISTVPGSGFG 314 D + +LLE+ G++ V GS FG Sbjct: 347 DEDFVSELLESEGVAVVHGSAFG 369
>AAT_BACST (Q59228) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 38.1 bits (87), Expect = 0.021 Identities = 28/92 (30%), Positives = 38/92 (41%) Frame = -3 Query: 538 ESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKL 359 ++ +R I+ D C +GA Y FP R + A AG + L Sbjct: 294 QAFEQRLNIIYDKLVQIPGFTCVKPQGAFYLFPNAR------EAAAMAGCRTVDEFVAAL 347 Query: 358 LEATGISTVPGSGFGQKEGVFHLRTTILPAEE 263 LE ++ VPGSGFG + V T L A E Sbjct: 348 LEEAKVALVPGSGFGAPDNVRLSYATSLDALE 379
>AAT_STRVG (Q60013) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 397 Score = 37.4 bits (85), Expect = 0.036 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Frame = -3 Query: 526 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEP--DVYYCLKLLE 353 RR Q M N V C EGA Y++P + + + + GK P V +L+ Sbjct: 297 RRRQTMVKMLNEIDGVFCPTPEGAFYAYPSV----KELLGKEIRGKRPQSSVELAALILD 352 Query: 352 ATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKK 230 ++ VPG FG +LR + +ED+ +S +K Sbjct: 353 EVEVAVVPGEAFGTPG---YLRLSYALGDEDLVEGVSRIQK 390
>AAT1_BACSU (P53001) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 37.4 bits (85), Expect = 0.036 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = -3 Query: 475 CNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGV 299 C EGA Y FP A + A+S G + + LLE ++ VPGSGFG E V Sbjct: 315 CVKPEGAFYLFPN------AKEAAQSCGFKDVDEFVKALLEEEKVAIVPGSGFGSPENV 367
>AAT_SYNY3 (Q55128) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 389 Score = 36.6 bits (83), Expect = 0.062 Identities = 20/84 (23%), Positives = 43/84 (51%) Frame = -3 Query: 550 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYY 371 ++++++ R Q++ +G N + C +GA Y F +D+AK+ + + Sbjct: 291 ETMVKAFTERRQVIVEGINQIAGLSCPNPKGAFYVF---------VDIAKTGLNSLE--F 339 Query: 370 CLKLLEATGISTVPGSGFGQKEGV 299 +LLE+ ++ +PG+ FG + V Sbjct: 340 SARLLESHQVAVIPGAAFGADDCV 363
>AATA_RHIME (Q02635) Aspartate aminotransferase A (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 35.0 bits (79), Expect = 0.18 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = -3 Query: 538 ESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSA--GK--EPDVYY 371 E + R ++ N + + C EGA Y +P A + K+A GK E D + Sbjct: 296 EIFQGRRDLVVSMLNQAKGISCPTPEGAFYVYPSC-----AGLIGKTAPSGKVIETDEDF 350 Query: 370 CLKLLEATGISTVPGSGFG 314 +LLE G++ V GS FG Sbjct: 351 VSELLETEGVAVVHGSAFG 369
>AAT_SULAC (Q4J8X2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 34.3 bits (77), Expect = 0.31 Identities = 21/113 (18%), Positives = 49/113 (43%) Frame = -3 Query: 550 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYY 371 K ++++ ++R +M + + N ++GA Y FP + ++ + +G + Sbjct: 293 KKMIDTFKKRRDVMYSELKKIKGIQVNKSQGAFYMFPYLG------EILRKSGMSTK-DF 345 Query: 370 CLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 212 + L++ G+ T+PG F G +R + E + + +F + M Sbjct: 346 SVNLIKEKGVVTIPGEVFPLDAGKEFVRLSFAVDENVIKEGVQRMSEFINQLM 398
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = -2 Query: 377 LLLPQASGSHWNIHCSRLRFWSERRGVPSEDNDPA 273 +L P +SGSH I S L SE +PSED DPA Sbjct: 20 ILDPGSSGSHVEISESSLESDSEADSLPSEDLDPA 54
>AAT_MYCTU (P63498) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 2.0 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -3 Query: 496 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 317 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 316 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 215 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>AAT_MYCBO (P63499) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 2.0 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -3 Query: 496 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 317 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 316 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 215 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>YDT4_SCHPO (O14209) Hypothetical aminotransferase C6B12.04c (EC 2.6.1.-)| Length = 421 Score = 30.8 bits (68), Expect = 3.4 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 7/131 (5%) Frame = -3 Query: 586 GDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYS---FPQIRLPQRA 416 G+ Y E KS S ++R +I+ F+ + +G+ Y+ F +++LP+ Sbjct: 295 GEAEKHNYYEEYKS---SYKKRFEILAKAFDQLE-IPYTIPDGSYYTMANFSKLKLPKDY 350 Query: 415 MDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGV----FHLRTTILPAEEDMPAI 248 + A + D C +L+ G++T+P + F E +LR E + Sbjct: 351 PFPEEIANRPRDFKLCYWILKEIGVATIPPTEFYTDEDAPVAENYLRFAFCKTFETLEEA 410 Query: 247 MSSFKKFNDSF 215 +K D F Sbjct: 411 ARRLQKLKDYF 421
>YARA_PROST (P46117) Putative HTH-type transcriptional regulator in aarA| 3'region Length = 282 Score = 30.8 bits (68), Expect = 3.4 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -3 Query: 394 GKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILP 272 G PD+ + LKL G ST+ + FGQ E V L +LP Sbjct: 190 GNTPDINHMLKLANKKGCSTIVLTRFGQDEAV-RLADLVLP 229
>THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC| Length = 619 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -3 Query: 442 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 263 PQIR+P R + V +AG+ P + Y + +G T P ++G+ LR + A Sbjct: 35 PQIRVPMREISVHPTAGEPPVIVY-----DPSGPYTDPTVETSIEKGLARLRHEWITARG 89 Query: 262 DMPA 251 D+ A Sbjct: 90 DVEA 93
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 30.0 bits (66), Expect = 5.8 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 213 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 344 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 1369 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 1413 Score = 30.0 bits (66), Expect = 5.8 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 213 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 344 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 917 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 961 Score = 29.6 bits (65), Expect = 7.6 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 264 SSAGRIVVLRWNTPSF*PKPEPGTVDI 344 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 29.6 bits (65), Expect = 7.6 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 264 SSAGRIVVLRWNTPSF*PKPEPGTVDI 344 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +3 Query: 453 IAPSVKLQTTLRQLLKPSVIICALLLKDSRIDL 551 IAP LQ L++ LKPS I L+ KD R +L Sbjct: 761 IAPHALLQAVLKRGLKPSCTIIPLMKKDHRDNL 793
>NUOL_CAMJE (Q9PMA7) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH| dehydrogenase I, chain L) (NDH-1, chain L) Length = 596 Score = 29.6 bits (65), Expect = 7.6 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 40 ISPLYISSIATSFLHHSYSSQLINQLQLLVEKSSIILIC 156 +SPL + +I F HS+ L +L + ++ I++IC Sbjct: 446 MSPLMVLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMIC 484
>POL_HV1Y2 (P35963) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix| protein p17 (MA); Capsid protein p24 (CA); p2 spacer peptide; Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6 pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse trans Length = 1434 Score = 29.3 bits (64), Expect = 9.9 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -3 Query: 568 KYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK 389 K+S+E +RR Q+ NS + +SFPQI L QR + K G+ Sbjct: 446 KFSSEQTRANSPIRRERQVWRRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQ 505
>ATTY_TRYCR (P33447) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 416 Score = 29.3 bits (64), Expect = 9.9 Identities = 23/88 (26%), Positives = 35/88 (39%) Frame = -3 Query: 544 ILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCL 365 I+ + A + + C + GAMY +I D+ K + DV + Sbjct: 314 IVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI-------DLEKYRDIKTDVEFFE 366 Query: 364 KLLEATGISTVPGSGFGQKEGVFHLRTT 281 KLLE + +PG+ F G L TT Sbjct: 367 KLLEEENVQVLPGTIF-HAPGFTRLTTT 393
>FAS_CHICK (P12276) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +3 Query: 453 IAPSVKLQTTLRQLLKPSVIICALLLKDSRIDL 551 IAP LQ LR+ LKP+ I L+ KD + +L Sbjct: 759 IAPHALLQAILRRTLKPTCTILPLMKKDHKNNL 791 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,452,138 Number of Sequences: 219361 Number of extensions: 1985536 Number of successful extensions: 5497 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5304 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5490 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
