>RDS3_YEAST (Q06835) Pre-mRNA-splicing factor RDS3 (Regulator of drug|
           sensitivity 3)
          Length = 107

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -1

Query: 280 KEEGMSSGYSLK*VDDSTPLCICMETPKRILRENSNCS--TQITGCSSLLPFALVLDLAV 107
           K+ G+ +G   +  D   P+C     PKR +R   NCS   Q   C  +    + ++ A 
Sbjct: 13  KQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNC-IICNLNVGVNDAF 71

Query: 106 YCWLCFGTG 80
           YCW C   G
Sbjct: 72  YCWECCRLG 80

>TNR8_HUMAN (P28908) Tumor necrosis factor receptor superfamily member 8|
           precursor (CD30L receptor) (Lymphocyte activation
           antigen CD30) (KI-1 antigen)
          Length = 595

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
 Frame = +1

Query: 244 ISSCSHCSFLPL*-TGIHYMVPASIFRCCICRDRRAASGGLCSSSPPANCASTSLSAVD* 420
           ++SC+ C F  +   G+    P +  +  +C          C+S  P NC   S   +  
Sbjct: 119 VNSCARCFFHSVCPAGMIVKFPGTAQKNTVCEPASPGVSPACAS--PENCKEPSSGTIPQ 176

Query: 421 AQRFPQSACPSSA--LPTRHGAR 483
           A+  P S   SSA  +P R G R
Sbjct: 177 AKPTPVSPATSSASTMPVRGGTR 199

>VIPR_CARAU (Q90308) Vasoactive intestinal polypeptide receptor (VIP-R) (VIP|
           receptor)
          Length = 447

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 193 ILRENSNCSTQITGCSSLLPFALVLDLAVYCWL 95
           +++E+ NCST   GC +++ F     +A + WL
Sbjct: 163 VIQESDNCSTASVGCKAVIVFFQYCIMASFFWL 195

>RCOR3_CHICK (Q5ZJ40) REST corepressor 3|
          Length = 378

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 346 AASGGLCSSSPPANCASTSLSAVD*AQRFPQSACPSSALPT 468
           A+S   CS SPP+  A+ +  A+  A+  P+SA P++  P+
Sbjct: 338 ASSTSCCSCSPPSASAAPTTGAIYSAKANPKSASPTAHPPS 378

>TNR27_HUMAN (Q9HAV5) Tumor necrosis factor receptor superfamily member 27|
           (X-linked ectodysplasin-A2 receptor) (EDA-A2 receptor)
          Length = 297

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +1

Query: 121 GQGQKVEENCSLLS---AYCSCYFPSRSF*ESPYRYRAEWNHQLISSCSHCSFL 273
           G GQ++ ++C       AYC+           P RY++ W H    SC  C+ +
Sbjct: 22  GPGQELSKDCGYGEGGDAYCTAC--------PPRRYKSSWGHHRCQSCITCAVI 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,189,750
Number of Sequences: 219361
Number of extensions: 1536705
Number of successful extensions: 3721
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3719
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)