ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal12i17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476245.1| Oryza sativa (japonica cultivar-group), predic... 119 1e-23
2dbj|AB110207.1| Oryza sativa (japonica cultivar-group) mRNA for ... 119 1e-23
3dbj|AK065530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
4gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
5gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7gb|AY111674.1| Zea mays CL9166_1 mRNA sequence 64 5e-07
8ref|XM_870724.1| PREDICTED: Bos taurus similar to Sad1/unc-84-li... 52 0.002
9gb|AE007283.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 42 2.0
10gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, co... 42 2.0
11gb|BC098208.1| Mus musculus unc-84 homolog B (C. elegans), mRNA ... 42 2.0
12emb|AL353705.23| Human DNA sequence from clone RP11-336N8 on chr... 42 2.0
13dbj|AK156246.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.0
14dbj|AK171058.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 2.0
15dbj|AK172398.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.0
16dbj|AK080116.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 2.0
17dbj|AK047688.1| Mus musculus adult male corpus striatum cDNA, RI... 42 2.0
18gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K... 42 2.0
19gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B... 42 2.0
20emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chr... 42 2.0
21gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p... 42 2.0
22ref|NM_111910.3| Arabidopsis thaliana unknown protein AT3G10730 ... 40 7.8
23gb|AC004622.1| Homo sapiens chromosome 5, PAC clone 170m10 (LBNL... 40 7.8
24gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC... 40 7.8
25gb|AC096658.1| Homo sapiens BAC clone RP11-29C24 from 7, complet... 40 7.8
26emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chr... 40 7.8
27ref|XM_503081.1| Yarrowia lipolytica CLIB122, YALI0D20636g predi... 40 7.8
28emb|AL390065.20| Human DNA sequence from clone RP11-520M5 on chr... 40 7.8
29gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, compl... 40 7.8
30gb|AC098870.3| Homo sapiens BAC clone RP11-651C19 from 4, comple... 40 7.8
31gb|AC008497.7| Homo sapiens chromosome 5 clone CTC-432M15, compl... 40 7.8
32gb|BT006045.1| Arabidopsis thaliana clone U50949 unknown protein... 40 7.8
33emb|BX824597.1|CNS0A6SJ Arabidopsis thaliana Full-length cDNA Co... 40 7.8
34gb|AC009494.2|AC009494 Homo sapiens BAC clone RP11-450B24 from Y... 40 7.8
35gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complet... 40 7.8
36gb|AY088410.1| Arabidopsis thaliana clone 6516 mRNA, complete se... 40 7.8
37dbj|AK118080.1| Arabidopsis thaliana At3g10730 mRNA for unknown ... 40 7.8
38gb|AY110347.1| Zea mays CL44325_1 mRNA sequence 40 7.8
39dbj|AP003464.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.8
40emb|Z69709.1|HSL3G9B Human DNA sequence from clone LA04NC01-3G9 ... 40 7.8
41dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 7.8
42emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.8
43emb|Z69711.1|HSLG9B Human DNA sequence from cosmid LG9, Huntingt... 40 7.8
44gb|AC023481.6| Homo sapiens chromosome 3 clone RP11-424H6 map 3p... 40 7.8 
>ref|XM_476245.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1362

 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 360  tggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctcctaggcttgtcggc 419
            ||||||||||| || ||| ||||||||||||| ||||  |||||||||||  |||||  |
Sbjct: 1232 tggaaggtctgtgcattgttcttctcaaggtcataagaaaactctcctagatttgtcacc 1173

                                                                        
Query: 420  atgcgtggttgcttgtctgaatcgtcgtctgctccttggtaccacccgctgacctggaaa 479
            |  |||| || |||||||||||| || |||| |||||  ||||| || ||||||||||||
Sbjct: 1172 acacgtgattccttgtctgaatcatcctctggtccttcataccatccactgacctggaaa 1113

                                                                        
Query: 480  tccttgggagcgctggagcggtcgaaggccacactcttgtcgacatgctctagagtgact 539
            ||||| ||||| || || || ||  | || ||||||||||| |||||||||||| | |||
Sbjct: 1112 tccttcggagcactagatcgatcataagctacactcttgtccacatgctctagacttact 1053

                                            
Query: 540  gcctcaggaacaattcctgtcctgagcctgat 571
            || |||||||  ||||||||||| ||| ||||
Sbjct: 1052 gcttcaggaattattcctgtcctcagcttgat 1021



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                        
Query: 232  gagagccaggctcgctgccgtgcaccctgaagcggtagatgcacgtcagctcaggctgcc 291
            |||||||||| || || || |||||||||||||| |||||||| ||||| || |  |  |
Sbjct: 1357 gagagccaggttctctaccatgcaccctgaagcgatagatgcatgtcagttctgaatttc 1298

                                                
Query: 292  cgtggttcgaggagaagtcgagccggaccatgttga 327
            | ||||| ||| ||||||| ||||| ||||||||||
Sbjct: 1297 catggtttgagcagaagtcaagccgaaccatgttga 1262
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>dbj|AB110207.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein,
            complete cds, clone: OsSad1
          Length = 1649

 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 360  tggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctcctaggcttgtcggc 419
            ||||||||||| || ||| ||||||||||||| ||||  |||||||||||  |||||  |
Sbjct: 1234 tggaaggtctgtgcattgttcttctcaaggtcataagaaaactctcctagatttgtcacc 1175

                                                                        
Query: 420  atgcgtggttgcttgtctgaatcgtcgtctgctccttggtaccacccgctgacctggaaa 479
            |  |||| || |||||||||||| || |||| |||||  ||||| || ||||||||||||
Sbjct: 1174 acacgtgattccttgtctgaatcatcctctggtccttcataccatccactgacctggaaa 1115

                                                                        
Query: 480  tccttgggagcgctggagcggtcgaaggccacactcttgtcgacatgctctagagtgact 539
            ||||| ||||| || || || ||  | || ||||||||||| |||||||||||| | |||
Sbjct: 1114 tccttcggagcactagatcgatcataagctacactcttgtccacatgctctagacttact 1055

                                            
Query: 540  gcctcaggaacaattcctgtcctgagcctgat 571
            || |||||||  ||||||||||| ||| ||||
Sbjct: 1054 gcttcaggaattattcctgtcctcagcttgat 1023



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                        
Query: 232  gagagccaggctcgctgccgtgcaccctgaagcggtagatgcacgtcagctcaggctgcc 291
            |||||||||| || || || |||||||||||||| |||||||| ||||| || |  |  |
Sbjct: 1359 gagagccaggttctctaccatgcaccctgaagcgatagatgcatgtcagttctgaatttc 1300

                                                
Query: 292  cgtggttcgaggagaagtcgagccggaccatgttga 327
            | ||||| ||| ||||||| ||||| ||||||||||
Sbjct: 1299 catggtttgagcagaagtcaagccgaaccatgttga 1264
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>dbj|AK065530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034C21, full
            insert sequence
          Length = 1925

 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 360  tggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctcctaggcttgtcggc 419
            ||||||||||| || ||| ||||||||||||| ||||  |||||||||||  |||||  |
Sbjct: 1445 tggaaggtctgtgcattgttcttctcaaggtcataagaaaactctcctagatttgtcacc 1386

                                                                        
Query: 420  atgcgtggttgcttgtctgaatcgtcgtctgctccttggtaccacccgctgacctggaaa 479
            |  |||| || |||||||||||| || |||| |||||  ||||| || ||||||||||||
Sbjct: 1385 acacgtgattccttgtctgaatcatcctctggtccttcataccatccactgacctggaaa 1326

                                                                        
Query: 480  tccttgggagcgctggagcggtcgaaggccacactcttgtcgacatgctctagagtgact 539
            ||||| ||||| || || || ||  | || ||||||||||| |||||||||||| | |||
Sbjct: 1325 tccttcggagcactagatcgatcataagctacactcttgtccacatgctctagacttact 1266

                                            
Query: 540  gcctcaggaacaattcctgtcctgagcctgat 571
            || |||||||  ||||||||||| ||| ||||
Sbjct: 1265 gcttcaggaattattcctgtcctcagcttgat 1234



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                        
Query: 232  gagagccaggctcgctgccgtgcaccctgaagcggtagatgcacgtcagctcaggctgcc 291
            |||||||||| || || || |||||||||||||| |||||||| ||||| || |  |  |
Sbjct: 1570 gagagccaggttctctaccatgcaccctgaagcgatagatgcatgtcagttctgaatttc 1511

                                                
Query: 292  cgtggttcgaggagaagtcgagccggaccatgttga 327
            | ||||| ||| ||||||| ||||| ||||||||||
Sbjct: 1510 catggtttgagcagaagtcaagccgaaccatgttga 1475
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>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OJ1653_D06, complete sequence
          Length = 71193

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 360 tggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctcctaggcttgtcggc 419
           ||||||||||| || ||| ||||||||||||| ||||  |||||||||||  |||||  |
Sbjct: 513 tggaaggtctgtgcattgttcttctcaaggtcataagaaaactctcctagatttgtcacc 572

                                                                       
Query: 420 atgcgtggttgcttgtctgaatcgtcgtctgctccttggtaccacccgctgacctggaaa 479
           |  |||| || |||||||||||| || |||| |||||  ||||| || ||||||||||||
Sbjct: 573 acacgtgattccttgtctgaatcatcctctggtccttcataccatccactgacctggaaa 632

                      
Query: 480 tccttgggagc 490
           ||||| |||||
Sbjct: 633 tccttcggagc 643



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 232 gagagccaggctcgctgccgtgcaccctgaagcggtagatgcacgtcagctcaggctgcc 291
           |||||||||| || || || |||||||||||||| |||||||| ||||| || |  |  |
Sbjct: 388 gagagccaggttctctaccatgcaccctgaagcgatagatgcatgtcagttctgaatttc 447

                                               
Query: 292 cgtggttcgaggagaagtcgagccggaccatgttga 327
           | ||||| ||| ||||||| ||||| ||||||||||
Sbjct: 448 catggtttgagcagaagtcaagccgaaccatgttga 483



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 515  cttgtcgacatgctctagagtgactgcctcaggaacaattcctgtcctgagcctgat 571
            |||||| |||||||||||| | ||||| |||||||  ||||||||||| ||| ||||
Sbjct: 1618 cttgtccacatgctctagacttactgcttcaggaattattcctgtcctcagcttgat 1674
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>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03,
              complete sequence
          Length = 185881

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                          
Query: 360    tggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctcctaggcttgtcggc 419
              ||||||||||| || ||| ||||||||||||| ||||  |||||||||||  |||||  |
Sbjct: 168181 tggaaggtctgtgcattgttcttctcaaggtcataagaaaactctcctagatttgtcacc 168240

                                                                          
Query: 420    atgcgtggttgcttgtctgaatcgtcgtctgctccttggtaccacccgctgacctggaaa 479
              |  |||| || |||||||||||| || |||| |||||  ||||| || ||||||||||||
Sbjct: 168241 acacgtgattccttgtctgaatcatcctctggtccttcataccatccactgacctggaaa 168300

                         
Query: 480    tccttgggagc 490
              ||||| |||||
Sbjct: 168301 tccttcggagc 168311



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                          
Query: 232    gagagccaggctcgctgccgtgcaccctgaagcggtagatgcacgtcagctcaggctgcc 291
              |||||||||| || || || |||||||||||||| |||||||| ||||| || |  |  |
Sbjct: 168056 gagagccaggttctctaccatgcaccctgaagcgatagatgcatgtcagttctgaatttc 168115

                                                  
Query: 292    cgtggttcgaggagaagtcgagccggaccatgttga 327
              | ||||| ||| ||||||| ||||| ||||||||||
Sbjct: 168116 catggtttgagcagaagtcaagccgaaccatgttga 168151



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 515    cttgtcgacatgctctagagtgactgcctcaggaacaattcctgtcctgagcctgat 571
              |||||| |||||||||||| | ||||| |||||||  ||||||||||| ||| ||||
Sbjct: 169286 cttgtccacatgctctagacttactgcttcaggaattattcctgtcctcagcttgat 169342
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                            
Query: 360      tggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctcctaggcttgtcggc 419
                ||||||||||| || ||| ||||||||||||| ||||  |||||||||||  |||||  |
Sbjct: 10783581 tggaaggtctgtgcattgttcttctcaaggtcataagaaaactctcctagatttgtcacc 10783640

                                                                            
Query: 420      atgcgtggttgcttgtctgaatcgtcgtctgctccttggtaccacccgctgacctggaaa 479
                |  |||| || |||||||||||| || |||| |||||  ||||| || ||||||||||||
Sbjct: 10783641 acacgtgattccttgtctgaatcatcctctggtccttcataccatccactgacctggaaa 10783700

                           
Query: 480      tccttgggagc 490
                ||||| |||||
Sbjct: 10783701 tccttcggagc 10783711



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                            
Query: 232      gagagccaggctcgctgccgtgcaccctgaagcggtagatgcacgtcagctcaggctgcc 291
                |||||||||| || || || |||||||||||||| |||||||| ||||| || |  |  |
Sbjct: 10783456 gagagccaggttctctaccatgcaccctgaagcgatagatgcatgtcagttctgaatttc 10783515

                                                    
Query: 292      cgtggttcgaggagaagtcgagccggaccatgttga 327
                | ||||| ||| ||||||| ||||| ||||||||||
Sbjct: 10783516 catggtttgagcagaagtcaagccgaaccatgttga 10783551



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 515      cttgtcgacatgctctagagtgactgcctcaggaacaattcctgtcctgagcctgat 571
                |||||| |||||||||||| | ||||| |||||||  ||||||||||| ||| ||||
Sbjct: 10784686 cttgtccacatgctctagacttactgcttcaggaattattcctgtcctcagcttgat 10784742
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>gb|AY111674.1| Zea mays CL9166_1 mRNA sequence
          Length = 1158

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 470 gacctggaaatccttgggagcgctggagcggtcgaaggccacactcttgtcgacatgctc 529
           ||||||||||||||| ||||| || || |  ||  |||||||||||||||| ||||| ||
Sbjct: 749 gacctggaaatcctttggagcacttgatctatcataggccacactcttgtcaacatgttc 808

                               
Query: 530 tagagtgactgcctcaggaa 549
           ||||||||| || |||||||
Sbjct: 809 tagagtgacggcttcaggaa 828



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 354 tctagctggaaggtctgggcgttgctcttctcaaggtcgtaagtgaactctccta 408
           ||||| ||||||||||| || |||||||| |||||||| |||| |||||||||||
Sbjct: 633 tctagttggaaggtctgagcattgctcttgtcaaggtcataagagaactctccta 687



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 246 ctgccgtgcaccctgaagcggtagatgca 274
           ||||| |||||||||||||| ||||||||
Sbjct: 528 ctgccatgcaccctgaagcgatagatgca 556
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>ref|XM_870724.1| PREDICTED: Bos taurus similar to Sad1/unc-84-like protein 2
            (Rab5-interacting protein) (Rab5IP) (LOC618392), mRNA
          Length = 4473

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 249  ccgtgcaccctgaagcggtagatgca 274
            ||||||||||||||||||||||||||
Sbjct: 3416 ccgtgcaccctgaagcggtagatgca 3391
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>gb|AE007283.1| Sinorhizobium meliloti 1021 plasmid pSymA section 89 of 121 of the
            complete plasmid sequence
          Length = 10765

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 205  gcaggcctcacgaggctgcggtgccgaga 233
            ||||||||  |||||||||||||||||||
Sbjct: 2637 gcaggcctagcgaggctgcggtgccgaga 2665
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>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence
          Length = 200663

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 249    ccgtgcaccctgaagcggtagatgcacgt 277
              |||||||||| |||||||||||| |||||
Sbjct: 113682 ccgtgcacccggaagcggtagatacacgt 113710
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>gb|BC098208.1| Mus musculus unc-84 homolog B (C. elegans), mRNA (cDNA clone
            MGC:106463 IMAGE:6827666), complete cds
          Length = 4142

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 249  ccgtgcaccctgaagcggtagatgcacgt 277
            |||||||||| |||||||||||| |||||
Sbjct: 2659 ccgtgcacccggaagcggtagatacacgt 2631
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>emb|AL353705.23| Human DNA sequence from clone RP11-336N8 on chromosome 9q21.11-21.31
              Contains a synaptogyrin 2 (SYNGR2) pseudogene, an
              argininosuccinate synthetase (ASS) pseudogene, a ribosomal
              protein L21 (RPL21) pseudogene, a CDC28 protein kinase
              regulatory subunit 2 (CKS2) pseudogene, the C9orf81 gene
              for chromosome 9 open reading frame 81 and a CpG island,
              complete sequence
          Length = 166372

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 394    aagtgaactctcctaggcttg 414
              |||||||||||||||||||||
Sbjct: 114132 aagtgaactctcctaggcttg 114152
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>dbj|AK156246.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830013H06 product:Sad1/unc-84-like
            protein 2 homolog [Mus musculus], full insert sequence
          Length = 3807

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 249  ccgtgcaccctgaagcggtagatgcacgt 277
            |||||||||| |||||||||||| |||||
Sbjct: 2415 ccgtgcacccggaagcggtagatacacgt 2387
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>dbj|AK171058.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630221N03
            product:Sad1/unc-84-like protein 2 homolog [Mus
            musculus], full insert sequence
          Length = 3770

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 249  ccgtgcaccctgaagcggtagatgcacgt 277
            |||||||||| |||||||||||| |||||
Sbjct: 2377 ccgtgcacccggaagcggtagatacacgt 2349
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>dbj|AK172398.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830206C01 product:Sad1/unc-84-like
            protein 2 homolog [Mus musculus], full insert sequence
          Length = 3808

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 249  ccgtgcaccctgaagcggtagatgcacgt 277
            |||||||||| |||||||||||| |||||
Sbjct: 2416 ccgtgcacccggaagcggtagatacacgt 2388
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>dbj|AK080116.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530064J21 product:SAD1 UNC-84
           DOMAIN PROTEIN 2 (FRAGMENT) homolog [Homo sapiens], full
           insert sequence
          Length = 1515

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 249 ccgtgcaccctgaagcggtagatgcacgt 277
           |||||||||| |||||||||||| |||||
Sbjct: 147 ccgtgcacccggaagcggtagatacacgt 119
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>dbj|AK047688.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030011B15 product:SAD1 UNC-84
           DOMAIN PROTEIN 2 (FRAGMENT) homolog [Homo sapiens], full
           insert sequence
          Length = 2152

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 249 ccgtgcaccctgaagcggtagatgcacgt 277
           |||||||||| |||||||||||| |||||
Sbjct: 760 ccgtgcacccggaagcggtagatacacgt 732
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>gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K24 map 3p, complete sequence
          Length = 142190

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 366  gtctgggcgttgctcttctcaaggt 390
            |||| ||||||||||||||||||||
Sbjct: 9716 gtcttggcgttgctcttctcaaggt 9740
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>gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B21 map 3p, complete sequence
          Length = 167220

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 366    gtctgggcgttgctcttctcaaggt 390
              |||| ||||||||||||||||||||
Sbjct: 124137 gtcttggcgttgctcttctcaaggt 124161
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>emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chromosome 2, complete
              sequence
          Length = 211892

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 232    gagagccaggctcgctgccgt 252
              |||||||||||||||||||||
Sbjct: 105368 gagagccaggctcgctgccgt 105388
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>gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p, complete sequence
          Length = 185496

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 366   gtctgggcgttgctcttctcaaggt 390
             |||| ||||||||||||||||||||
Sbjct: 89802 gtcttggcgttgctcttctcaaggt 89826
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>ref|NM_111910.3| Arabidopsis thaliana unknown protein AT3G10730 mRNA, complete cds
          Length = 1756

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  accctgaagcggtagatgca 274
            ||||||||||||||||||||
Sbjct: 1485 accctgaagcggtagatgca 1466
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>gb|AC004622.1| Homo sapiens chromosome 5, PAC clone 170m10 (LBNL H89), complete
             sequence
          Length = 85181

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   aattcctgtcctgagcctga 570
             ||||||||||||||||||||
Sbjct: 27956 aattcctgtcctgagcctga 27975
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>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
             complete sequence
          Length = 80379

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   accctgaagcggtagatgca 274
             ||||||||||||||||||||
Sbjct: 57809 accctgaagcggtagatgca 57790
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>gb|AC096658.1| Homo sapiens BAC clone RP11-29C24 from 7, complete sequence
          Length = 77142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 366   gtctgggcgttgctcttctcaagg 389
             ||||||| ||||||||||||||||
Sbjct: 65270 gtctgggagttgctcttctcaagg 65293
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>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3'
              end of the MGST3 gene for microsomal glutathione
              S-transferase 3, the ALDH9A1 gene for aldehyde
              dehydrogenase 9 family (member A1), a ribosomal protein S13
              (RPS13) pseudogene, a ribosomal protein L21 (RPL21)
              pseudogene, two novel genes (FLJ42974), a carbonic
              anhydrase XIV (CA14) pseudogene, the gene for putative
              membrane protein (LOC54499), a ribosomal protein L26
              (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the
              UMPK gene for uridine monophosphate kinase and two CpG
              islands, complete sequence
          Length = 188217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 366    gtctgggcgttgctcttctcaagg 389
              ||||||| ||||||||||||||||
Sbjct: 135410 gtctgggagttgctcttctcaagg 135433
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>ref|XM_503081.1| Yarrowia lipolytica CLIB122, YALI0D20636g predicted mRNA
          Length = 2883

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 445  cgtctgctccttggtaccac 464
            ||||||||||||||||||||
Sbjct: 2265 cgtctgctccttggtaccac 2246
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>emb|AL390065.20| Human DNA sequence from clone RP11-520M5 on chromosome 4, complete
              sequence
          Length = 157119

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ccaggctcgctgccgtgcac 256
              ||||||||||||||||||||
Sbjct: 127347 ccaggctcgctgccgtgcac 127328
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>gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, complete sequence
          Length = 200968

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 366   gtctgggcgttgctcttctcaagg 389
             |||| |||||||||||||||||||
Sbjct: 21453 gtcttggcgttgctcttctcaagg 21476
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>gb|AC098870.3| Homo sapiens BAC clone RP11-651C19 from 4, complete sequence
          Length = 163597

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 366   gtctgggcgttgctcttctcaagg 389
             ||||||| ||||||||||||||||
Sbjct: 26236 gtctgggggttgctcttctcaagg 26259
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>gb|AC008497.7| Homo sapiens chromosome 5 clone CTC-432M15, complete sequence
          Length = 132119

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   aattcctgtcctgagcctga 570
             ||||||||||||||||||||
Sbjct: 34345 aattcctgtcctgagcctga 34326
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>gb|BT006045.1| Arabidopsis thaliana clone U50949 unknown protein (At3g10730) mRNA,
            complete cds
          Length = 1399

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  accctgaagcggtagatgca 274
            ||||||||||||||||||||
Sbjct: 1325 accctgaagcggtagatgca 1306
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>emb|BX824597.1|CNS0A6SJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH59ZC10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1668

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  accctgaagcggtagatgca 274
            ||||||||||||||||||||
Sbjct: 1392 accctgaagcggtagatgca 1373
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>gb|AC009494.2|AC009494 Homo sapiens BAC clone RP11-450B24 from Y, complete sequence
          Length = 188314

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gtctgggcgttgctcttctc 385
              ||||||||||||||||||||
Sbjct: 142080 gtctgggcgttgctcttctc 142061
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>gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complete sequence
          Length = 207516

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 366    gtctgggcgttgctcttctcaagg 389
              ||||||| ||||||||||||||||
Sbjct: 159894 gtctgggggttgctcttctcaagg 159917
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>gb|AY088410.1| Arabidopsis thaliana clone 6516 mRNA, complete sequence
          Length = 1202

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 accctgaagcggtagatgca 274
           ||||||||||||||||||||
Sbjct: 995 accctgaagcggtagatgca 976
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>dbj|AK118080.1| Arabidopsis thaliana At3g10730 mRNA for unknown protein, complete
            cds, clone: RAFL19-33-G08
          Length = 1755

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  accctgaagcggtagatgca 274
            ||||||||||||||||||||
Sbjct: 1485 accctgaagcggtagatgca 1466
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>gb|AY110347.1| Zea mays CL44325_1 mRNA sequence
          Length = 741

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 gcggtagatgcacgtcagct 282
           ||||||||||||||||||||
Sbjct: 315 gcggtagatgcacgtcagct 334
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>dbj|AP003464.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-768K4, complete
             sequence
          Length = 148000

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   tgctcttctcaaggtcgtaagtga 399
             ||||||||||||||| ||||||||
Sbjct: 84777 tgctcttctcaaggtagtaagtga 84800
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>emb|Z69709.1|HSL3G9B Human DNA sequence from clone LA04NC01-3G9 on chromosome 4, complete
             sequence
          Length = 23434

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ccaggctcgctgccgtgcac 256
             ||||||||||||||||||||
Sbjct: 14593 ccaggctcgctgccgtgcac 14574
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aggaatacgaacagcaagtc 75
              ||||||||||||||||||||
Sbjct: 414664 aggaatacgaacagcaagtc 414683
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 445     cgtctgctccttggtaccac 464
               ||||||||||||||||||||
Sbjct: 2615886 cgtctgctccttggtaccac 2615905
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>emb|Z69711.1|HSLG9B Human DNA sequence from cosmid LG9, Huntington's Disease Region,
             chromosome 4p16.3 contains mRNA, RFLP marker and ESTs
          Length = 23434

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ccaggctcgctgccgtgcac 256
             ||||||||||||||||||||
Sbjct: 14593 ccaggctcgctgccgtgcac 14574
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>gb|AC023481.6| Homo sapiens chromosome 3 clone RP11-424H6 map 3p, complete sequence
          Length = 184065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 366   gtctgggcgttgctcttctcaagg 389
             |||| |||||||||||||||||||
Sbjct: 76832 gtcttggcgttgctcttctcaagg 76809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,611,773
Number of Sequences: 3902068
Number of extensions: 3611773
Number of successful extensions: 65043
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64912
Number of HSP's gapped (non-prelim): 127
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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