ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal12i15 |
|---|---|
| Clone Library Name | barley_pub |
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 206 bits (523), Expect = 5e-53 Identities = 101/117 (86%), Positives = 111/117 (94%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD Sbjct: 291 LGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 350 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 226 DNA+LL+F +KLE AC+G VE+GKMTKDLAL++HG SK++R YLNTEEFIDAVAAE Sbjct: 351 DNAKLLDFTEKLEAACIGVVEAGKMTKDLALILHG-SKLSREHYLNTEEFIDAVAAE 406
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 206 bits (523), Expect = 5e-53 Identities = 102/117 (87%), Positives = 110/117 (94%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD Sbjct: 311 LGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 370 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 226 DNA LL+F +KLE AC+G VESGKMTKDLAL++HG SK++R YLNTEEFIDAVAAE Sbjct: 371 DNATLLDFTEKLEAACIGVVESGKMTKDLALILHG-SKLSREHYLNTEEFIDAVAAE 426
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 199 bits (506), Expect = 5e-51 Identities = 98/117 (83%), Positives = 108/117 (92%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAWTRGLAHRA LD Sbjct: 290 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLD 349 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 226 +N RLL+F +KLE AC+G VESGKMTKDLAL++HG SK++R YLNTEEFIDAVA E Sbjct: 350 NNERLLDFTEKLEAACIGAVESGKMTKDLALIIHG-SKLSRDHYLNTEEFIDAVADE 405
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 196 bits (499), Expect = 3e-50 Identities = 96/117 (82%), Positives = 106/117 (90%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAWTRGLAHRA LD Sbjct: 290 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLD 349 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 226 +N RLL+F +KLE AC+G VESGKMTKDLAL++ SK++R YLNTEEFIDAVA E Sbjct: 350 NNERLLDFTEKLEAACIGAVESGKMTKDLALIIIHGSKLSREHYLNTEEFIDAVADE 406
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 167 bits (424), Expect = 2e-41 Identities = 80/112 (71%), Positives = 94/112 (83%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LG+MTSVL+CPDGKT+EAEAAHGTVTRH+R+HQKG ETSTN IASIFAW+RGLAHRA+LD Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLD 347 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 241 +N L FA+ LEE C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 348 NNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 167 bits (424), Expect = 2e-41 Identities = 80/112 (71%), Positives = 94/112 (83%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LG+MTSVL+CPDGKT+EAEAAHGTVTRH+R+HQKG ETSTN IASIFAW+RGLAHRA+LD Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLD 347 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 241 +N L FA+ LEE C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 348 NNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 166 bits (420), Expect = 4e-41 Identities = 80/112 (71%), Positives = 93/112 (83%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LG+MTSVL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFAW+RGLAHRAKLD Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLD 347 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 241 +N L FA LEE C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 348 NNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 165 bits (418), Expect = 8e-41 Identities = 79/112 (70%), Positives = 94/112 (83%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LG+MTSVL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFAW+RGLAHRAKLD Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLD 347 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 241 +N L FA+ LE+ C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 348 NNTELSFFAKALEDVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 164 bits (414), Expect = 2e-40 Identities = 80/112 (71%), Positives = 92/112 (82%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LG+MTSVL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFAWTRGLAHRAKLD Sbjct: 288 LGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLD 347 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 241 +N L FA LEE + T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 348 NNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 162 bits (410), Expect = 6e-40 Identities = 81/115 (70%), Positives = 92/115 (80%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFAWTRGL HR KLD Sbjct: 296 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLD 355 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 235 N L+ FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 356 GNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTI 410
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 162 bits (410), Expect = 6e-40 Identities = 81/115 (70%), Positives = 92/115 (80%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFAWTRGL HR KLD Sbjct: 327 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLD 386 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 235 N L+ FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 387 GNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTI 441
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 162 bits (409), Expect = 8e-40 Identities = 81/115 (70%), Positives = 92/115 (80%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFAWTRGL HR KLD Sbjct: 327 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLD 386 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 235 N L+ FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 387 GNQDLIRFAQMLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTI 441
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 151 bits (382), Expect = 1e-36 Identities = 78/115 (67%), Positives = 89/115 (77%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TST IASIFAWTRGL HR KLD Sbjct: 399 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTKGIASIFAWTRGLEHRGKLD 458 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 235 N L+ FAQ E+ CV TVE G MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 459 GNQDLIRFAQTREKVCVQTVE-GAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTI 512
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 149 bits (376), Expect = 6e-36 Identities = 75/115 (65%), Positives = 88/115 (76%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVLM DGKT+EAEAAHGTVTRH+R +Q G TSTN IASIFAWTRGL HR KLD Sbjct: 291 LGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLD 350 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 232 +++FA KLE + TVESGKMTKDLA+L+ D+LN+EEF+DA+A Sbjct: 351 GTPEVIDFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSEEFLDAIA 400
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 149 bits (376), Expect = 6e-36 Identities = 75/115 (65%), Positives = 88/115 (76%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVLM DGKT+EAEAAHGTVTRH+R +Q G TSTN IASIFAWTRGL HR KLD Sbjct: 291 LGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLD 350 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 232 +++FA KLE + TVESGKMTKDLA+L+ D+LN+EEF+DA+A Sbjct: 351 GTPEVIDFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSEEFLDAIA 400
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 144 bits (364), Expect = 1e-34 Identities = 77/116 (66%), Positives = 89/116 (76%), Gaps = 1/116 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTS LM PDGK EAEAAHGTVTRH+R HQ+G ETSTNSIASIFAWTRGLA R KLD Sbjct: 313 LGLMTSALMTPDGKAYEAEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLAQRGKLD 372 Query: 396 DNARLLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 232 + +++FA KLE+A + TVE + MTKDLAL + K RS Y+ T EF+DAVA Sbjct: 373 ETPDVVDFASKLEQATIDTVEVDRIMTKDLALAM---GKTDRSAYVTTTEFLDAVA 425
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 144 bits (363), Expect = 2e-34 Identities = 78/115 (67%), Positives = 89/115 (77%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+ PDGKT E+EAAHGTVTRHFR HQ+G ETSTNSIASIFAWTRG+ R KLD Sbjct: 288 LGLMTSVLITPDGKTFESEAAHGTVTRHFRQHQQGKETSTNSIASIFAWTRGIIQRGKLD 347 Query: 396 DNARLLEFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 235 + +++F Q LE A V TV E G MTKDLAL++ K RS Y+ TEEFIDAV Sbjct: 348 NTPDVVKFGQILESATVNTVQEDGIMTKDLALIL---GKSERSAYVTTEEFIDAV 399
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 142 bits (359), Expect = 5e-34 Identities = 74/116 (63%), Positives = 89/116 (76%), Gaps = 1/116 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTS+L+ PDGKT E+EAAHGTVTRHFR HQ+G ETSTNSIASIFAWTR + R KLD Sbjct: 288 LGLMTSILITPDGKTFESEAAHGTVTRHFRKHQRGEETSTNSIASIFAWTRAIIQRGKLD 347 Query: 396 DNARLLEFAQKLEEACVGTVE-SGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 232 + +++F LE+A + TV+ GKMTKDLAL++ K RS Y+ TEEFID VA Sbjct: 348 NTDDVIKFGNLLEKATLDTVQVGGKMTKDLALML---GKTNRSSYVTTEEFIDEVA 400
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 141 bits (355), Expect = 2e-33 Identities = 74/116 (63%), Positives = 87/116 (75%), Gaps = 1/116 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+ PDGK E+EAAHGTVTRH+R HQ+G ETSTNSIASI+AWTRGL R KLD Sbjct: 289 LGLMTSVLVTPDGKAFESEAAHGTVTRHYRQHQQGKETSTNSIASIYAWTRGLIQRGKLD 348 Query: 396 DNARLLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 232 D +++FA++LE+A + TV MTKDLAL K RS Y+ TEEFID VA Sbjct: 349 DTPEVVKFAEELEKAVIETVSKDNIMTKDLALT---QGKTDRSSYVTTEEFIDGVA 401
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 139 bits (350), Expect = 6e-33 Identities = 68/114 (59%), Positives = 86/114 (75%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+ PDGKT+EAEAAHGTVTRH+R HQ+G TSTN IASIFAWT+GL+ R K D Sbjct: 286 LGLMTSVLLSPDGKTVEAEAAHGTVTRHYRQHQQGKATSTNPIASIFAWTQGLSFRGKFD 345 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 235 D +++FA+ LE+ C+ TVE G MTKDLALL+ ++ TE+F +A+ Sbjct: 346 DTPDVVKFAETLEQVCIKTVEGGAMTKDLALLIGPDQA-----WMTTEQFFEAI 394
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 136 bits (343), Expect = 4e-32 Identities = 72/117 (61%), Positives = 88/117 (75%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTSVL+ P+G+T E+EAAHGTV RH+ + KG +TSTNSIASIFAWTRGLAHR +LD Sbjct: 298 LGLMTSVLIHPNGRTFESEAAHGTVQRHYMQYLKGKKTSTNSIASIFAWTRGLAHRGRLD 357 Query: 396 DNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 226 N RL++FA LE ACV VE G MTKDL LL + + Y++T EF+DAV +E Sbjct: 358 GNERLVKFANALEHACVRCVEKGIMTKDLYLL-----SKSPNGYVDTFEFLDAVKSE 409
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 133 bits (335), Expect = 3e-31 Identities = 72/115 (62%), Positives = 86/115 (74%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTS+L+ PDGKT E+EAAHGTVTRH+R +QKG ETSTNSIASIFAW+RGL R +LD Sbjct: 305 LGLMTSILVTPDGKTFESEAAHGTVTRHYRKYQKGEETSTNSIASIFAWSRGLLKRGELD 364 Query: 396 DNARLLEFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 235 + L +FA LE A + TV + G MTKDLAL + RS Y+ TEEF+DAV Sbjct: 365 NTPALCKFANILESATLNTVQQDGIMTKDLALACGNNE---RSAYVTTEEFLDAV 416
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 123 bits (309), Expect = 3e-28 Identities = 65/115 (56%), Positives = 81/115 (70%), Gaps = 1/115 (0%) Frame = -3 Query: 576 LGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLD 397 LGLMTS L+ P G+ E+EAAHGTVTRH+R HQKG ETSTN IASIFAWTRGL R KLD Sbjct: 375 LGLMTSTLVTPTGEAFESEAAHGTVTRHYREHQKGRETSTNPIASIFAWTRGLIQRGKLD 434 Query: 396 DNARLLEFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 235 + ++ FA++LE AC+ V + G MTKDLAL + R ++ T E++ AV Sbjct: 435 ETPDVVTFAEELERACIEVVNDEGIMTKDLAL---ACGRKEREAWVTTREYMAAV 486
>INHBA_SHEEP (P43032) Inhibin beta A chain precursor (Activin beta-A chain)| Length = 425 Score = 30.4 bits (67), Expect = 3.8 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = -3 Query: 525 AEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTR-GLAHRAKLDDNARLLEFAQKLEEAC 349 AE+ T HF + Q+G + S A I+ + + A+R + RL + + L+ Sbjct: 127 AESGTARKTLHFEISQEGSDLSVVERAEIWLFLKVPKANRTRSKVTIRLFQQQKHLQ--- 183 Query: 348 VGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDA 238 G++++G+ +++ L K +S+ L +E+ +DA Sbjct: 184 -GSLDAGEEAEEVGL------KGEKSEMLISEKVVDA 213
>Y1185_METJA (Q58585) Hypothetical protein MJ1185| Length = 622 Score = 30.0 bits (66), Expect = 5.0 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -1 Query: 545 LMVKQSKPKLPMAQSLVISVFTRKVVKPAQTALLPSLLGQEDLHTGQS*TTTLDFLNLHR 366 L+V+ K +LP+ ++L I F RK +KP L+ LLG ED+ D +NL+R Sbjct: 504 LVVESIKLELPI-ENLGICRFHRKWLKPVLKELVKELLGIEDI--------VEDSINLYR 554 Query: 365 NL 360 + Sbjct: 555 EI 556
>IDH3A_RAT (Q99NA5) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 30.0 bits (66), Expect = 5.0 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = -3 Query: 522 EAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVG 343 E+ HGT G+ N A + + L H L + A K+E AC Sbjct: 287 ESVHGTAP------DIAGKDMANPTALLLSAVMMLRHMG-------LFDHAAKIEAACFA 333 Query: 342 TVESGK-MTKDLALLVHGSSKVTRSDYLNTEE 250 T++ GK +TKDL G+SK SD+ TEE Sbjct: 334 TIKDGKSLTKDLG----GNSKC--SDF--TEE 357
>IDH3A_BOVIN (P41563) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) (Isocitrate dehydrogenase subunits 3/4) Length = 366 Score = 30.0 bits (66), Expect = 5.0 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = -3 Query: 522 EAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVG 343 E+ HGT G+ N A + + L H L + A K+E AC Sbjct: 287 ESVHGTAP------DIAGKDMANPTALLLSAVMMLRHMG-------LFDHAAKIETACFA 333 Query: 342 TVESGK-MTKDLALLVHGSSKVTRSDYLNTEE 250 T++ GK +TKDL G+SK SD+ TEE Sbjct: 334 TIKDGKSLTKDLG----GNSKC--SDF--TEE 357
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 29.6 bits (65), Expect = 6.5 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -3 Query: 504 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 352 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVSRTIQNNFFDSSKQEAID 477 Query: 351 ---CVGTVESGKMTKDLALLVHGSSKVT 277 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.3 bits (64), Expect = 8.5 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -3 Query: 504 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 352 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAID 477 Query: 351 ---CVGTVESGKMTKDLALLVHGSSKVT 277 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.3 bits (64), Expect = 8.5 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -3 Query: 504 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 352 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAID 477 Query: 351 ---CVGTVESGKMTKDLALLVHGSSKVT 277 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>TPM1_SCHMA (P42637) Tropomyosin 1 (TMI) (Polypeptide 49)| Length = 284 Score = 29.3 bits (64), Expect = 8.5 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -3 Query: 531 IEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDD----NARLLEFAQK 364 I+ + A T+ ++ + +TN+ A + A TR + R +D ++RL E K Sbjct: 55 IDCDEAQETLQEQMNKLEETDKRATNAEAEVAAMTRRI--RLLEEDLEVSSSRLTETLTK 112 Query: 363 LEEACVGTVESGKMTKDLAL 304 LEEA ES + KDL + Sbjct: 113 LEEASKTAEESERGRKDLEI 132
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 29.3 bits (64), Expect = 8.5 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -3 Query: 504 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 352 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAID 477 Query: 351 ---CVGTVESGKMTKDLALLVHGSSKVT 277 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>FST_BRARE (Q9YHV4) Follistatin precursor (FS) (Activin-binding protein)| Length = 322 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +1 Query: 412 VCKSSCPSKDGSNAVCAGFTTFLVNTEMTSDCAM 513 VC SCP AVCA NT S+CAM Sbjct: 272 VCAESCPESRSEEAVCAS-----DNTTYPSECAM 300
>IDH3A_MOUSE (Q9D6R2) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 29.3 bits (64), Expect = 8.5 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -3 Query: 522 EAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVG 343 E+ HGT G+ N A + + L H L + A K+E AC Sbjct: 287 ESVHGTAP------DIAGKDMANPTALLLSAVMMLRHMG-------LFDHAAKIEAACFA 333 Query: 342 TVESGK-MTKDL 310 T++ GK +TKDL Sbjct: 334 TIKDGKSLTKDL 345 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,853,479 Number of Sequences: 219361 Number of extensions: 1397896 Number of successful extensions: 3555 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3466 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3541 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
