| Clone Name | rbaal12f24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | BORL3_ARATH (Q9SSG5) Putative boron transporter-like protein 3 | 47 | 5e-05 | 2 | BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4 | 44 | 3e-04 | 3 | BORL2_ARATH (Q9XI23) Boron transporter-like protein 2 | 44 | 6e-04 | 4 | STAT6_MOUSE (P52633) Signal transducer and transcription activat... | 30 | 8.9 |
|---|
>BORL3_ARATH (Q9SSG5) Putative boron transporter-like protein 3| Length = 683 Score = 47.0 bits (110), Expect = 5e-05 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Frame = -3 Query: 679 AEYDELEGVQHEHTLEEDGSISGSCDG--RIDAEILDELTTHRGELKHRVVSHREERHLQ 506 AEY+E+ G + LE + S G DAEILDELTT RGELK R + H E++ Q Sbjct: 606 AEYEEIPGTPR-NPLELSFRSNNSARGVQECDAEILDELTTSRGELKVRTLGHNEDKGHQ 664 Query: 505 VHSNAV 488 ++ + Sbjct: 665 IYPKEI 670
>BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4| Length = 710 Score = 44.3 bits (103), Expect = 3e-04 Identities = 22/39 (56%), Positives = 27/39 (69%) Frame = -3 Query: 619 ISGSCDGRIDAEILDELTTHRGELKHRVVSHREERHLQV 503 + S D DAEILDE+TT RGELKHR +S +E+R V Sbjct: 666 VENSEDEFYDAEILDEITTSRGELKHRTLSVKEDRSQMV 704
>BORL2_ARATH (Q9XI23) Boron transporter-like protein 2| Length = 683 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%) Frame = -3 Query: 679 AEYDELEGVQH---EHTLEEDGSISGSCDGRIDAEILDELTTHRGELKHRVVSHREERHL 509 AEY+E+ G E + + S G +G DAEILDELTT RGELK R ++ E++ Sbjct: 606 AEYEEIPGTPRNPLELSFRSNDSKRGVQEG--DAEILDELTTSRGELKVRTLNLNEDKGN 663 Query: 508 QVH 500 Q++ Sbjct: 664 QIY 666
>STAT6_MOUSE (P52633) Signal transducer and transcription activator 6| Length = 837 Score = 29.6 bits (65), Expect = 8.9 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Frame = -3 Query: 574 ELTTHRGELKHRVVSHR---EERHL-----QVH-SNAVQPSV*R*NNGPGPTED---FIN 431 + TT G L HRV R E HL QV N + P + NGPGP+ED + Sbjct: 129 KFTTPLGRLHHRVRETRLLRESLHLGPKTGQVSLQNLIDPPL----NGPGPSEDLPTILQ 184 Query: 430 DSIGNEEGNPQAVVLCRLHYY 368 ++G+ E Q +VL R+ + Sbjct: 185 GTVGDLE-TTQPLVLLRIQIW 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,268,526 Number of Sequences: 219361 Number of extensions: 2045395 Number of successful extensions: 5847 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5568 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5842 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)