| Clone Name | rbaal12e13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ATOE_HAEIN (P44051) Short-chain fatty acids transporter | 33 | 0.62 | 2 | ATOE_ECOLI (P76460) Short-chain fatty acids transporter | 32 | 1.4 |
|---|
>ATOE_HAEIN (P44051) Short-chain fatty acids transporter| Length = 447 Score = 32.7 bits (73), Expect = 0.62 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 303 NSSFVTTGILTAFPYYT*SQLMLEHGG 383 N++ T GIL FP+Y QLM+EH G Sbjct: 305 NATRSTAGILVQFPFYAGVQLMMEHSG 331
>ATOE_ECOLI (P76460) Short-chain fatty acids transporter| Length = 440 Score = 31.6 bits (70), Expect = 1.4 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 318 TTGILTAFPYYT*SQLMLEHGG 383 T GIL FP+Y QLM+EH G Sbjct: 303 TAGILVQFPFYAGIQLMMEHSG 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,644,925 Number of Sequences: 219361 Number of extensions: 1299204 Number of successful extensions: 2717 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2717 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)