>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell
           death 1) (Lethal leaf-spot 1 homolog) (Lls1)
          Length = 537

 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
 Frame = -3

Query: 669 DIYXLHIEERNFAAAGVEN--------WQKAVYVPTSSDNMVIAFRNWFRKHCKSQVGW- 517
           D+  L  +E+ F A  +E+        + K  + PT +D  V+AFRNW R+H KSQ  W 
Sbjct: 376 DMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWF 435

Query: 516 -AAPTIGQLPETP-TKDKLMERYWSHVAQCRSCSTALKTMKALEVALQVASVAVVGFLAV 343
            + P+   LP T  TK ++++R+  H   C SC  A  + + L+  L  A+V    F A 
Sbjct: 436 GSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATV----FWAA 491

Query: 342 AKGTLVTSVVQRAAVVTLAVLCFAASRWLASFIEKNFYFQDYVHA 208
             G  V S VQ   V+    L  AAS +     EKNF F+DYVH+
Sbjct: 492 TAG--VPSDVQIRLVLAGLSLISAASAYALHEQEKNFVFRDYVHS 534

>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)|
          Length = 1947

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -2

Query: 619  RKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRS-VTRDSNQRQAHGEVLVAR 443
            +KL E    A+      ++L+  + ++L++S +    + R+    D N+R+A GE+ +A+
Sbjct: 1020 KKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIAQ 1079

Query: 442  RAVQELQHGAEDHESA 395
              ++EL     D E+A
Sbjct: 1080 ETLEELNKSKSDAENA 1095

>RECX_DEIRA (Q9RUS2) Regulatory protein recX|
          Length = 204

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/75 (30%), Positives = 39/75 (52%)
 Frame = -2

Query: 634 RCGGRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEV 455
           R  G R + E+ +R  +  +  D   ELV++ L+    LG  +D  V R  N+R+  GE+
Sbjct: 62  RALGARAITEAELRGKLERRSED--PELVEEVLRRVQELGYQNDAEVARAENKRRGVGEL 119

Query: 454 LVARRAVQELQHGAE 410
            V R+ ++    GA+
Sbjct: 120 RV-RQTLRRRGLGAD 133

>P2RY8_HUMAN (Q86VZ1) P2Y purinoceptor 8 (P2Y8)|
          Length = 359

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -3

Query: 306 AAVVTLA-VLCFAASRW--LASFIEKNFYFQDYVHAYK 202
           AAVV LA V CFA + +  LA  + + FY + Y H YK
Sbjct: 239 AAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYK 276

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = -2

Query: 649  RGAQLRCGGRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQ 470
            R A+   GG+   ++ + R+    +HG R Q+    +  +SG  GR  D SV  DS  R 
Sbjct: 1656 RHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSS-TDSG-TGRRQDSSVVGDSGNRG 1713

Query: 469  AHG 461
            + G
Sbjct: 1714 SSG 1716

>ZN407_HUMAN (Q9C0G0) Zinc finger protein 407 (Fragment)|
          Length = 1165

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
 Frame = +1

Query: 136 SKAASAQELQNPNNGRRMIWPSLVGMDVILEIEVLLDEAGEPAGRGEAQHRQCHDGGSLH 315
           S   S    QN N+G      S +  +   +   + ++AGE     E +     DGG + 
Sbjct: 107 SNYGSPSRFQNENSGS-----SALNCETAKKNHEISNDAGELRVHCEGEGGNAGDGGGVV 161

Query: 316 DRRH*CPL---GDRKETD-----DRHRRDLQGNLQRFHGLQRRAAAPALRDVRPV 456
             RH CP+   G+R          R  R+ QGNL+   G  R A    L D++ V
Sbjct: 162 PHRHLCPVTLDGERSAESPVLVVTRITRE-QGNLES-GGQNRVARGHGLEDLKGV 214

>TOP1_STRCO (Q9X909) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
            (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
            (Swivelase)
          Length = 952

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 248  KLASQRDAAKHSTANVTTAALCTTDVTSVPLATARKPTTATDATCRATSS 397
            K A+++  AK + A   TAA  TT        +  K TTA  A  +AT+S
Sbjct: 898  KTAAKKAPAKKAAATKKTAAAKTTAAKKTAAKSTAKKTTAKTAAKKATAS 947


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,185,603
Number of Sequences: 219361
Number of extensions: 1501254
Number of successful extensions: 4944
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4941
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)