ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal12e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186198.1| Oryza sativa (japonica cultivar-group), mRNA 54 6e-04
2ref|NM_186194.2| Oryza sativa (japonica cultivar-group), mRNA 54 6e-04
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
4dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
5dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
6dbj|AK121613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
7dbj|AK103996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
8dbj|AK072540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
9gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 1... 48 0.034
10ref|NM_194108.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
11gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 46 0.14
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
13dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
14gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
15ref|NM_197690.1| Oryza sativa (japonica cultivar-group) putative... 44 0.53
16emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in ... 44 0.53
17dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
18gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 44 0.53
19emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in... 44 0.53
20ref|XM_511378.1| PREDICTED: Pan troglodytes similar to hypotheti... 42 2.1
21ref|NM_152345.3| Homo sapiens ankyrin repeat domain 13B (ANKRD13... 42 2.1
22emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.1
23gb|BC062597.1| Homo sapiens ankyrin repeat domain 13B, mRNA (cDN... 42 2.1
24gb|BC032554.1| Homo sapiens ankyrin repeat domain 13B, mRNA (cDN... 42 2.1
25dbj|AK097716.1| Homo sapiens cDNA FLJ40397 fis, clone TESTI2037002 42 2.1
26dbj|AK092673.1| Homo sapiens cDNA FLJ35354 fis, clone PUAEN2000080 42 2.1
27emb|CR602753.1| full-length cDNA clone CS0DK003YC07 of HeLa cell... 42 2.1
28gb|AC115537.2| Homo sapiens BAC clone RP11-1D15 from 4, complete... 42 2.1
29gb|AC104564.11| Homo sapiens chromosome 17, clone RP11-68I3, com... 42 2.1
30emb|BX649298.7| Zebrafish DNA sequence from clone DKEY-12H2 in l... 42 2.1
31gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, comple... 42 2.1
32dbj|D49839.1|ASNPEPAB Aspergillus niger pepA gene for aspergillo... 42 2.1
33gb|M34454.1|ASNASPPA Aspergillus awamori aspergillopepsin A (pep... 42 2.1
34dbj|D49838.1|ASNPEPAA Aspergillus niger pepA mRNA for aspergillo... 42 2.1
35ref|NM_193809.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
36gb|AC100927.11| Mus musculus chromosome 3, clone RP23-72A21, com... 40 8.3
37ref|XM_478912.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
38gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
39gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosom... 40 8.3
40ref|XM_868545.1| PREDICTED: Bos taurus similar to ankyrin repeat... 40 8.3
41gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete... 40 8.3
42gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Can... 40 8.3
43gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosom... 40 8.3
44ref|XM_546554.2| PREDICTED: Canis familiaris similar to zinc fin... 40 8.3
45ref|XM_850556.1| PREDICTED: Canis familiaris similar to zinc fin... 40 8.3
46gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, co... 40 8.3
47gb|BC019935.1| Mus musculus regulatory factor X-associated prote... 40 8.3
48emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chro... 40 8.3
49emb|AL592503.5| Human DNA sequence from clone RP11-267A5 on chro... 40 8.3
50gb|AC158757.6| Mus musculus chromosome 5, clone RP23-64D3, compl... 40 8.3
51dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
52gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 gen... 40 8.3
53gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome... 40 8.3
54dbj|AK144633.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 8.3
55gb|AF335512.1|AF335512 Mus musculus regulatory factor X-associat... 40 8.3
56dbj|AK077640.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 8.3
57gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, com... 40 8.3
58dbj|AK045708.1| Mus musculus adult male corpora quadrigemina cDN... 40 8.3
59dbj|AK087489.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 8.3
60dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
61dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
63gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, r... 40 8.3
64emb|BX820828.1|CNS0AA7H Arabidopsis thaliana Full-length cDNA Co... 40 8.3
65dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
66dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
67dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
68gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, com... 40 8.3
69dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
70dbj|AK105641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
71dbj|AK102803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
72gb|AC142452.5| Mus musculus BAC clone RP24-266E20 from 3, comple... 40 8.3
73gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, comple... 40 8.3
74dbj|AK063462.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
75gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83... 40 8.3
76gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80... 40 8.3
77dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 40 8.3
78gb|AC113953.6| Mus musculus chromosome 18, clone RP24-215C1, com... 40 8.3
79gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.3
80gb|AC102572.17| Mus musculus chromosome 18, clone RP23-234A9, co... 40 8.3
81gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
82gb|BC047123.1| Mus musculus regulatory factor X-associated prote... 40 8.3
83ref|NM_133231.1| Mus musculus regulatory factor X-associated pro... 40 8.3
84gb|AC132409.3| Mus musculus BAC clone RP23-346B1 from 6, complet... 40 8.3
85dbj|AB030193.1| Mus musculus mRNA, partial sequence, clone:2-29 40 8.3
86dbj|D45177.1|ASNPRB Aspergillus niger preproproctase B mRNA, com... 40 8.3 
>ref|NM_186198.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1431

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 563 ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
           |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 986 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 936
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>ref|NM_186194.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1588

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 563 ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
           |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 994 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 944
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 563    ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
              |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 673158 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 673108



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 563    ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
              |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 664610 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 664560



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 563    ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
              |||||||||  ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 685623 ggcgccagcgccggcgggaacacgtgctcgaacagcggcccgacgcggttg 685573



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      agcaggtcgtcgtcgtcgtc 228
                ||||||||||||||||||||
Sbjct: 23634153 agcaggtcgtcgtcgtcgtc 23634172
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>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_G09
          Length = 115815

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 563   ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
             |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 11689 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 11639



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 563  ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
            |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 3141 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 3091



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 563   ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
             |||||||||  ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 24154 ggcgccagcgccggcgggaacacgtgctcgaacagcggcccgacgcggttg 24104
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>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1123_C12
          Length = 114309

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 563    ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
              |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 107660 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 107610



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 563   ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
             |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 99112 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 99062
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>dbj|AK121613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043J23, full
           insert sequence
          Length = 1966

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 563 ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
           |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 970 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 920
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>dbj|AK103996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G03, full
           insert sequence
          Length = 1222

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 563 ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
           |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 628 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 578
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>dbj|AK072540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132I08, full
           insert sequence
          Length = 1588

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 563 ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
           |||||||||  ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 994 ggcgccagctccggcgggaacacgtgctcgtacagcggcccgacgcggttg 944
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>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 574   cggcgggaacacgtgcttgtacaacggacccacgcggttg 613
             ||||||||||||||||| ||||| ||| || |||||||||
Sbjct: 22174 cggcgggaacacgtgctcgtacagcggcccgacgcggttg 22135
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>ref|NM_194108.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 563  ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
            |||||||||  ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 1037 ggcgccagcgccggcgggaacacgtgctcgaacagcggcccgacgcggttg 987
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                         
Query: 531   ccttgaatggcagcccgacgaaggagatgtgaggcgccagccgcggcgggaacacgtgct 590
             |||||| |||||| ||||||||||||| ||  |||||  ||  ||| ||||| |||||||
Sbjct: 78802 ccttgactggcaggccgacgaaggagaggttcggcgcgtgcttcggggggaagacgtgct 78743

                                    
Query: 591   tgtacaacggacccacgcggttg 613
             ||||||  || || |||||||||
Sbjct: 78742 tgtacagaggcccgacgcggttg 78720
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                            
Query: 531      ccttgaatggcagcccgacgaaggagatgtgaggcgccagccgcggcgggaacacgtgct 590
                |||||| |||||| ||||||||||||| ||  |||||  ||  ||| ||||| |||||||
Sbjct: 21255557 ccttgactggcaggccgacgaaggagaggttcggcgcgtgcttcggggggaagacgtgct 21255616

                                       
Query: 591      tgtacaacggacccacgcggttg 613
                ||||||  || || |||||||||
Sbjct: 21255617 tgtacagaggcccgacgcggttg 21255639



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 209      agcaggtcgtcgtcgtcgtc 228
                ||||||||||||||||||||
Sbjct: 10781391 agcaggtcgtcgtcgtcgtc 10781372
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>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1513_F02
          Length = 126845

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 563  ggcgccagccgcggcgggaacacgtgcttgtacaacggacccacgcggttg 613
            |||||||||  ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 5430 ggcgccagcgccggcgggaacacgtgctcgaacagcggcccgacgcggttg 5380
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                            
Query: 531      ccttgaatggcagcccgacgaaggagatgtgaggcgccagccgcggcgggaacacgtgct 590
                |||||| |||||| ||||||||||||| ||  |||||  ||  ||| ||||| |||||||
Sbjct: 21266821 ccttgactggcaggccgacgaaggagaggttcggcgcgtgcttcggggggaagacgtgct 21266880

                                       
Query: 591      tgtacaacggacccacgcggttg 613
                ||||||  || || |||||||||
Sbjct: 21266881 tgtacagaggcccgacgcggttg 21266903



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 209      agcaggtcgtcgtcgtcgtc 228
                ||||||||||||||||||||
Sbjct: 10787430 agcaggtcgtcgtcgtcgtc 10787411
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>ref|NM_197690.1| Oryza sativa (japonica cultivar-group) putative flavin-containing
           monooxygenase (OSJNBb0014I11.8), mRNA
          Length = 1146

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 532 cttgaatggcagcccgacgaaggagatgtgaggcgccagccgcggcgggaacacgtgctt 591
           ||||| |||||| ||||||||||||| ||  |||||  ||  ||| ||||| ||||||||
Sbjct: 768 cttgactggcaggccgacgaaggagaggttcggcgcgtgcttcggggggaagacgtgctt 709

                                 
Query: 592 gtacaacggacccacgcggttg 613
           |||||  || || |||||||||
Sbjct: 708 gtacagaggcccgacgcggttg 687
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>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete
              sequence
          Length = 211817

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 62     ttgtcacacacaatgaattctg 83
              ||||||||||||||||||||||
Sbjct: 151774 ttgtcacacacaatgaattctg 151753
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>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0784G04
          Length = 157458

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 576   gcgggaacacgtgcttgtacaacggacccacgcggttg 613
             ||||||||||||||| ||||| ||| || |||||||||
Sbjct: 98017 gcgggaacacgtgctcgtacagcggcccgacgcggttg 97980
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 330   gctccgccagccagtcctcgtactcg 355
             |||| |||||||||||||||||||||
Sbjct: 38089 gctctgccagccagtcctcgtactcg 38114
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>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4,
             complete sequence
          Length = 228177

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 62    ttgtcacacacaatgaattctg 83
             ||||||||||||||||||||||
Sbjct: 59992 ttgtcacacacaatgaattctg 60013
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>ref|XM_511378.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ25555
            (LOC454550), mRNA
          Length = 1623

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cagcaggtcgtcgtcgtcgtc 228
            |||||||||||||||||||||
Sbjct: 1266 cagcaggtcgtcgtcgtcgtc 1246
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>ref|NM_152345.3| Homo sapiens ankyrin repeat domain 13B (ANKRD13B), mRNA
          Length = 2694

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cagcaggtcgtcgtcgtcgtc 228
            |||||||||||||||||||||
Sbjct: 1684 cagcaggtcgtcgtcgtcgtc 1664
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 80      tctgcttttttgcagcccagc 100
               |||||||||||||||||||||
Sbjct: 3974266 tctgcttttttgcagcccagc 3974286
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>gb|BC062597.1| Homo sapiens ankyrin repeat domain 13B, mRNA (cDNA clone
            IMAGE:5247577), partial cds
          Length = 3068

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cagcaggtcgtcgtcgtcgtc 228
            |||||||||||||||||||||
Sbjct: 1487 cagcaggtcgtcgtcgtcgtc 1467
to top
>gb|BC032554.1| Homo sapiens ankyrin repeat domain 13B, mRNA (cDNA clone MGC:45496
            IMAGE:5557374), complete cds
          Length = 2694

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cagcaggtcgtcgtcgtcgtc 228
            |||||||||||||||||||||
Sbjct: 1684 cagcaggtcgtcgtcgtcgtc 1664
to top
>dbj|AK097716.1| Homo sapiens cDNA FLJ40397 fis, clone TESTI2037002
          Length = 2465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cagcaggtcgtcgtcgtcgtc 228
            |||||||||||||||||||||
Sbjct: 1473 cagcaggtcgtcgtcgtcgtc 1453
to top
>dbj|AK092673.1| Homo sapiens cDNA FLJ35354 fis, clone PUAEN2000080
          Length = 2988

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cagcaggtcgtcgtcgtcgtc 228
            |||||||||||||||||||||
Sbjct: 1454 cagcaggtcgtcgtcgtcgtc 1434
to top
>emb|CR602753.1| full-length cDNA clone CS0DK003YC07 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1685

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 cagcaggtcgtcgtcgtcgtc 228
           |||||||||||||||||||||
Sbjct: 152 cagcaggtcgtcgtcgtcgtc 132
to top
>gb|AC115537.2| Homo sapiens BAC clone RP11-1D15 from 4, complete sequence
          Length = 51626

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  aagcacatatcagaggtactt 183
            |||||||||||||||||||||
Sbjct: 7302 aagcacatatcagaggtactt 7282
to top
>gb|AC104564.11| Homo sapiens chromosome 17, clone RP11-68I3, complete sequence
          Length = 173058

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    cagcaggtcgtcgtcgtcgtc 228
              |||||||||||||||||||||
Sbjct: 108746 cagcaggtcgtcgtcgtcgtc 108766
to top
>emb|BX649298.7| Zebrafish DNA sequence from clone DKEY-12H2 in linkage group 20,
             complete sequence
          Length = 122662

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    atgtttttgctgtctgtttgt 65
             |||||||||||||||||||||
Sbjct: 67220 atgtttttgctgtctgtttgt 67200
to top
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence
          Length = 182415

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   cagcaggtcgtcgtcgtcgtc 228
             |||||||||||||||||||||
Sbjct: 73309 cagcaggtcgtcgtcgtcgtc 73329
to top
>dbj|D49839.1|ASNPEPAB Aspergillus niger pepA gene for aspergillopepsin A precursor,
            complete cds (exon1-4)
          Length = 2579

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 442  catctcctccggtgacggcagctcg 466
            |||||||| ||||||||||||||||
Sbjct: 1532 catctcctacggtgacggcagctcg 1556
to top
>gb|M34454.1|ASNASPPA Aspergillus awamori aspergillopepsin A (pepA) gene, complete cds
          Length = 1764

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 442 catctcctccggtgacggcagctcg 466
           |||||||| ||||||||||||||||
Sbjct: 647 catctcctacggtgacggcagctcg 671
to top
>dbj|D49838.1|ASNPEPAA Aspergillus niger pepA mRNA for aspergillopepsin A precursor,
           complete cds
          Length = 1389

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 442 catctcctccggtgacggcagctcg 466
           |||||||| ||||||||||||||||
Sbjct: 446 catctcctacggtgacggcagctcg 470
to top
>ref|NM_193809.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1317

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 578 gggaacacgtgcttgtacaacggacccacgcggttg 613
           ||||||||||||| ||||| ||| || |||||||||
Sbjct: 818 gggaacacgtgctcgtacagcggcccgacgcggttg 783
to top
>gb|AC100927.11| Mus musculus chromosome 3, clone RP23-72A21, complete sequence
          Length = 196709

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 205    gtccagcaggtcgtcgtcgtcgtc 228
              ||||||||||||| ||||||||||
Sbjct: 172249 gtccagcaggtcggcgtcgtcgtc 172272
to top
>ref|XM_478912.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2237

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  agcaggtcgtcgtcgtcgtc 228
            ||||||||||||||||||||
Sbjct: 1713 agcaggtcgtcgtcgtcgtc 1732
to top
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0055D24 map C535, complete sequence
          Length = 174759

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   agcaggtcgtcgtcgtcgtc 228
             ||||||||||||||||||||
Sbjct: 31776 agcaggtcgtcgtcgtcgtc 31757
to top
>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence
          Length = 215802

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 387    tcttggggcgcccatgggcctcca 410
              ||||||||| ||||||||||||||
Sbjct: 197947 tcttggggctcccatgggcctcca 197970
to top
>ref|XM_868545.1| PREDICTED: Bos taurus similar to ankyrin repeat domain 13 family,
            member D (LOC616514), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  agcaggtcgtcgtcgtcgtc 228
            ||||||||||||||||||||
Sbjct: 1553 agcaggtcgtcgtcgtcgtc 1534
to top
>gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete sequence
          Length = 166693

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   aggtcgtcgtcgtcgtcaca 231
             ||||||||||||||||||||
Sbjct: 68613 aggtcgtcgtcgtcgtcaca 68594
to top
>gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 207366

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatgaattctgctttctttt 23
             ||||||||||||||||||||
Sbjct: 12112 aatgaattctgctttctttt 12131
to top
>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence
          Length = 234158

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     attctgctttcttttgaact 28
             ||||||||||||||||||||
Sbjct: 27865 attctgctttcttttgaact 27884
to top
>ref|XM_546554.2| PREDICTED: Canis familiaris similar to zinc finger, ZZ-type with EF
            hand domain 1, transcript variant 1 (LOC489436), mRNA
          Length = 8892

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gctttcttttgaacttactc 33
            ||||||||||||||||||||
Sbjct: 4320 gctttcttttgaacttactc 4301
to top
>ref|XM_850556.1| PREDICTED: Canis familiaris similar to zinc finger, ZZ-type with EF
            hand domain 1, transcript variant 2 (LOC489436), mRNA
          Length = 8682

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gctttcttttgaacttactc 33
            ||||||||||||||||||||
Sbjct: 4323 gctttcttttgaacttactc 4304
to top
>gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, complete sequence
          Length = 232234

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 387   tcttggggcgcccatgggcctcca 410
             ||||||||| ||||||||||||||
Sbjct: 40470 tcttggggctcccatgggcctcca 40493
to top
>gb|BC019935.1| Mus musculus regulatory factor X-associated protein, mRNA (cDNA
           clone MGC:32426 IMAGE:5041039), complete cds
          Length = 1060

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 274 gtccagcaggtcggcgtcgtcgtc 251
to top
>emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chromosome X Contains the
             3' end of the CNK2 gene for connector enhancer of KSR2
             (KIAA0902), gene FLJ34960, 3' end of the SMPX gene for
             X-linked small muscle protein and a CpG island, complete
             sequence
          Length = 124186

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatgaattctgctttctttt 23
             ||||||||||||||||||||
Sbjct: 84356 aatgaattctgctttctttt 84375
to top
>emb|AL592503.5| Human DNA sequence from clone RP11-267A5 on chromosome 13, complete
             sequence
          Length = 99970

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tttgaacttactcacacatt 40
             ||||||||||||||||||||
Sbjct: 48760 tttgaacttactcacacatt 48741
to top
>gb|AC158757.6| Mus musculus chromosome 5, clone RP23-64D3, complete sequence
          Length = 247058

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 387    tcttggggcgcccatgggcctcca 410
              ||||||||| ||||||||||||||
Sbjct: 105565 tcttggggctcccatgggcctcca 105542
to top
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0560B06
          Length = 161720

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 578   gggaacacgtgcttgtacaacggacccacgcggttg 613
             ||||||||||||| ||||| ||| || |||||||||
Sbjct: 84451 gggaacacgtgctcgtacagcggcccgacgcggttg 84416
to top
>gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete
              sequence
          Length = 179199

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    agcaggtcgtcgtcgtcgtc 228
              ||||||||||||||||||||
Sbjct: 112159 agcaggtcgtcgtcgtcgtc 112140
to top
>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence
          Length = 207840

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tttgaacttactcacacatt 40
              ||||||||||||||||||||
Sbjct: 102293 tttgaacttactcacacatt 102274
to top
>dbj|AK144633.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730015B16 product:regulatory factor
           X-associated protein, full insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 298 gtccagcaggtcggcgtcgtcgtc 275
to top
>gb|AF335512.1|AF335512 Mus musculus regulatory factor X-associated protein (Rfxap) mRNA,
           complete cds
          Length = 1064

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 291 gtccagcaggtcggcgtcgtcgtc 268
to top
>dbj|AK077640.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730495K23 product:REGULATORY
           FACTOR X-ASSOCIATED PROTEIN homolog [Mus musculus], full
           insert sequence
          Length = 1077

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 309 gtccagcaggtcggcgtcgtcgtc 286
to top
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      attctgctttcttttgaact 28
              ||||||||||||||||||||
Sbjct: 115439 attctgctttcttttgaact 115420
to top
>dbj|AK045708.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
          full-length enriched library, clone:B230306L21
          product:unclassifiable, full insert sequence
          Length = 3077

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 9  attctgctttcttttgaact 28
          ||||||||||||||||||||
Sbjct: 44 attctgctttcttttgaact 63
to top
>dbj|AK087489.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130305I03 product:REGULATORY FACTOR
           X-ASSOCIATED PROTEIN homolog [Mus musculus], full insert
           sequence
          Length = 2155

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 312 gtccagcaggtcggcgtcgtcgtc 289
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     agcaggtcgtcgtcgtcgtc 228
               ||||||||||||||||||||
Sbjct: 8986451 agcaggtcgtcgtcgtcgtc 8986470
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 574      cggcgggaacacgtgcttgtacaacggacccacgcggttg 613
                ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 19272773 cggcgggaacacgtgctcgaacagcgggccgacgcggttg 19272812
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 578      gggaacacgtgcttgtacaacggacccacgcggttg 613
                ||||||||||||| ||||| ||| || |||||||||
Sbjct: 15068399 gggaacacgtgctcgtacagcggcccgacgcggttg 15068364
to top
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone
             BACR05C11, complete sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gtcgtcgtcgtcgtcacagt 233
             ||||||||||||||||||||
Sbjct: 78538 gtcgtcgtcgtcgtcacagt 78557
to top
>emb|BX820828.1|CNS0AA7H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH73ZB06 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1460

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  gtcgtcgtcgtcgtcacagt 233
            ||||||||||||||||||||
Sbjct: 1134 gtcgtcgtcgtcgtcacagt 1153
to top
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1329D01
          Length = 141938

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 578   gggaacacgtgcttgtacaacggacccacgcggttg 613
             ||||||||||||| ||||| ||| || |||||||||
Sbjct: 94646 gggaacacgtgctcgtacagcggcccgacgcggttg 94611
to top
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0043B10
          Length = 167399

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 578   gggaacacgtgcttgtacaacggacccacgcggttg 613
             ||||||||||||| ||||| ||| || |||||||||
Sbjct: 40365 gggaacacgtgctcgtacagcggcccgacgcggttg 40330
to top
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0001B01
          Length = 147585

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 574    cggcgggaacacgtgcttgtacaacggacccacgcggttg 613
              ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 110537 cggcgggaacacgtgctcgaacagcgggccgacgcggttg 110576
to top
>gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, complete sequence
          Length = 172244

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 387    tcttggggcgcccatgggcctcca 410
              ||||||||| ||||||||||||||
Sbjct: 136650 tcttggggctcccatgggcctcca 136627
to top
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1127_E01
          Length = 123787

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   agcaggtcgtcgtcgtcgtc 228
             ||||||||||||||||||||
Sbjct: 86594 agcaggtcgtcgtcgtcgtc 86613
to top
>dbj|AK105641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-E08, full
            insert sequence
          Length = 1688

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 574  cggcgggaacacgtgcttgtacaacggacccacgcggttg 613
            ||||||||||||||||| | ||| ||| || |||||||||
Sbjct: 1018 cggcgggaacacgtgctcgaacagcgggccgacgcggttg 979
to top
>dbj|AK102803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108G13, full
            insert sequence
          Length = 2237

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  agcaggtcgtcgtcgtcgtc 228
            ||||||||||||||||||||
Sbjct: 1713 agcaggtcgtcgtcgtcgtc 1732
to top
>gb|AC142452.5| Mus musculus BAC clone RP24-266E20 from 3, complete sequence
          Length = 149936

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   gtccagcaggtcgtcgtcgtcgtc 228
             ||||||||||||| ||||||||||
Sbjct: 16776 gtccagcaggtcggcgtcgtcgtc 16799
to top
>gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, complete sequence
          Length = 173258

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     ttcttttgaacttactcacacatt 40
              ||||| ||||||||||||||||||
Sbjct: 129815 ttcttctgaacttactcacacatt 129838
to top
>dbj|AK063462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H03, full
           insert sequence
          Length = 1606

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 agcaggtcgtcgtcgtcgtc 228
           ||||||||||||||||||||
Sbjct: 228 agcaggtcgtcgtcgtcgtc 209
to top
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete
              sequence
          Length = 230236

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gtcgtcgtcgtcgtcacagt 233
              ||||||||||||||||||||
Sbjct: 111430 gtcgtcgtcgtcgtcacagt 111449
to top
>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the
             complete sequence
          Length = 233746

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   aggtcgtcgtcgtcgtcaca 231
             ||||||||||||||||||||
Sbjct: 85539 aggtcgtcgtcgtcgtcaca 85520
to top
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 561    gaggcgccagccgcggcgggaaca 584
              |||||||| |||||||||||||||
Sbjct: 151884 gaggcgcccgccgcggcgggaaca 151907
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>gb|AC113953.6| Mus musculus chromosome 18, clone RP24-215C1, complete sequence
          Length = 201174

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    tggtgaagcacatatcagag 177
              ||||||||||||||||||||
Sbjct: 159316 tggtgaagcacatatcagag 159335
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 197    tgcgcttggtccagcaggtcgtcg 220
              ||||| ||||||||||||||||||
Sbjct: 139124 tgcgcgtggtccagcaggtcgtcg 139147
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>gb|AC102572.17| Mus musculus chromosome 18, clone RP23-234A9, complete sequence
          Length = 204140

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  tggtgaagcacatatcagag 177
            ||||||||||||||||||||
Sbjct: 4123 tggtgaagcacatatcagag 4142
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     agcaggtcgtcgtcgtcgtc 228
               ||||||||||||||||||||
Sbjct: 9058114 agcaggtcgtcgtcgtcgtc 9058133
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>gb|BC047123.1| Mus musculus regulatory factor X-associated protein, mRNA (cDNA
           clone IMAGE:5028485)
          Length = 1060

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 274 gtccagcaggtcggcgtcgtcgtc 251
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>ref|NM_133231.1| Mus musculus regulatory factor X-associated protein (Rfxap), mRNA
          Length = 1064

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 291 gtccagcaggtcggcgtcgtcgtc 268
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>gb|AC132409.3| Mus musculus BAC clone RP23-346B1 from 6, complete sequence
          Length = 207528

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gtgaagcacatatcagaggt 179
              ||||||||||||||||||||
Sbjct: 122947 gtgaagcacatatcagaggt 122928
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>dbj|AB030193.1| Mus musculus mRNA, partial sequence, clone:2-29
          Length = 529

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 gtccagcaggtcgtcgtcgtcgtc 228
           ||||||||||||| ||||||||||
Sbjct: 310 gtccagcaggtcggcgtcgtcgtc 287
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>dbj|D45177.1|ASNPRB Aspergillus niger preproproctase B mRNA, complete cds
          Length = 1414

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 442 catctcctccggtgacggcagctc 465
           |||||||| |||||||||||||||
Sbjct: 482 catctcctacggtgacggcagctc 505


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,799,849
Number of Sequences: 3902068
Number of extensions: 4799849
Number of successful extensions: 126396
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 125167
Number of HSP's gapped (non-prelim): 1229
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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