ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11p01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IF2_PROMA (Q7VA20) Translation initiation factor IF-2 30 7.1

>IF2_PROMA (Q7VA20) Translation initiation factor IF-2|
          Length = 1134

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -1

Query: 614 SSQP*KTRRGQQRTNGSYKGHQVCGDASRVVFPARKHIRPDSDGV*AYEEHCKSNEAREG 435
           S QP  T+  +    GSYKG++V      V  P R++ +PD+ G  A + + +     +G
Sbjct: 280 SGQPGSTKHPRNLPTGSYKGNRV----ELVGAPIRRNTKPDNGGRGARDGNFRQGGPNQG 335


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,447,709
Number of Sequences: 219361
Number of extensions: 2081887
Number of successful extensions: 5101
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5100
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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