ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11o24 |
|---|---|
| Clone Library Name | barley_pub |
>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor| (Phosphate transport protein) (PTP) Length = 349 Score = 128 bits (321), Expect = 1e-29 Identities = 68/113 (60%), Positives = 80/113 (70%) Frame = -3 Query: 609 YKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 430 YKH VP P+AECSK QL ++FA GYIAGVFCAIVSHPAD +VS LN K ATVG V K Sbjct: 231 YKHVVPKPRAECSKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIVGK 290 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 271 +G G++ +GL RI+MIGTLT QW IYDA KV + +P PP A + ES Sbjct: 291 LGFAGVW-KGLGPRIIMIGTLTALQWFIYDAVKVWLRMP----RPPPAEMPES 338
>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)| Length = 340 Score = 119 bits (298), Expect = 7e-27 Identities = 62/114 (54%), Positives = 77/114 (67%) Frame = -3 Query: 609 YKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 430 Y++ VP P+AECSK+ QL ++F GYIAGVFCAIVSHPAD +VS LN AT G +KK Sbjct: 224 YQYVVPKPRAECSKAEQLVVTFVAGYIAGVFCAIVSHPADTVVSKLNQDSQATAGGILKK 283 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEESA 268 +G G++ +GL RI+MIGTLT QW IYD+ KV + LP PP P A Sbjct: 284 LGFAGVW-KGLVPRIIMIGTLTALQWFIYDSVKVALNLPRP--PPPEMPASLKA 334
>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 362 Score = 117 bits (294), Expect = 2e-26 Identities = 60/113 (53%), Positives = 78/113 (69%) Frame = -3 Query: 609 YKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 430 YK VP P++ECSK QL ++F GYIAGVFCAIVSHPAD++VS LN KG++ + +K+ Sbjct: 246 YKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASEVLKR 305 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 271 +G G++ +GL RI+MIGTLT QW IYD+ KV LP PP + ES Sbjct: 306 LGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 353
>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 357 Score = 116 bits (291), Expect = 5e-26 Identities = 59/113 (52%), Positives = 78/113 (69%) Frame = -3 Query: 609 YKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 430 YK VP P++EC+K+ QL ++F GYIAGVFCAIVSHPAD++VS LN KG+T +++ Sbjct: 241 YKFVVPKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLQR 300 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 271 +G G++ +GL RI+MIGTLT QW IYD+ KV LP PP + ES Sbjct: 301 LGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 348
>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 356 Score = 116 bits (291), Expect = 5e-26 Identities = 59/113 (52%), Positives = 78/113 (69%) Frame = -3 Query: 609 YKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 430 YK VP P++EC+K+ QL ++F GYIAGVFCAIVSHPAD++VS LN KG+T +++ Sbjct: 240 YKFVVPKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLQR 299 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 271 +G G++ +GL RI+MIGTLT QW IYD+ KV LP PP + ES Sbjct: 300 LGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 347
>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 362 Score = 115 bits (288), Expect = 1e-25 Identities = 60/113 (53%), Positives = 77/113 (68%) Frame = -3 Query: 609 YKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 430 YK VP P++ECSK QL ++F GYIAGVFCAIVSHPAD++VS LN KG++ +K+ Sbjct: 246 YKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASLVLKR 305 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 271 +G G++ +GL RI+MIGTLT QW IYD+ KV LP PP + ES Sbjct: 306 LGFKGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 353
>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate| transport protein 2) (PTP 2) (mPic 2) (Pi carrier isoform 2) Length = 300 Score = 100 bits (249), Expect = 3e-21 Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 6/104 (5%) Frame = -3 Query: 597 VPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAV------ 436 +P K E + Q+ +SF GGY+AG+ CA VSHPAD +VS +N+ + A +V Sbjct: 198 LPKKKEEMNALQQISVSFVGGYLAGILCAAVSHPADVMVSKINSERKANESMSVASKRIY 257 Query: 435 KKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTG 304 +KIG GL+ GL +RIVMIGTLT QW IYD+FK VGLPTTG Sbjct: 258 QKIGFTGLWN-GLMVRIVMIGTLTSFQWLIYDSFKAYVGLPTTG 300
>MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Phosphate| transport protein) (PTP) (mPic 1) (Mitochondrial import receptor) (p32) Length = 311 Score = 72.0 bits (175), Expect = 1e-12 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 7/101 (6%) Frame = -3 Query: 588 PKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGA----TVG---DAVKK 430 PK + S +S ++ G AG+ AIVS PAD L+S +N K A TVG K+ Sbjct: 204 PKEKLSSTSTTLLNLLSGLTAGLAAAIVSQPADTLLSKVNKTKKAPGQSTVGLLAQLAKQ 263 Query: 429 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTT 307 +G G F GLP R+VM+GTLT Q+GIY + K +G P T Sbjct: 264 LGFFGSFA-GLPTRLVMVGTLTSLQFGIYGSLKSTLGCPPT 303
>MFRN_CAEBR (Q620A6) Mitoferrin| Length = 311 Score = 35.0 bits (79), Expect = 0.17 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 22/96 (22%) Frame = -3 Query: 543 AGGYIAGVFCAIVSHPADNLVSFLNNAKGAT------------------VGDAVKKI--- 427 AGG +AG A V+ P D + + LN + A + DAV+ I Sbjct: 210 AGG-LAGGLAAAVTTPMDCVKTVLNTQQAAEADPSNRRIFLKARYRYRGISDAVRTIYSQ 268 Query: 426 -GMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMV 322 GM G F+ GL R++ T W +Y+ FK M+ Sbjct: 269 RGMAG-FSCGLQARVIFQVPATALSWSVYELFKFML 303
>YQ51_CAEEL (Q09461) Putative mitochondrial carrier C16C10.1| Length = 360 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Frame = -3 Query: 552 ISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGM----------LGLFTR 403 +SF G AGV +I +HP D + + G ++ D K I + F+ Sbjct: 270 VSFVSGAAAGVVASIFTHPFDVIKTNCQIRIGGSIDDMNKSITTVIKDMYHSRGISAFSS 329 Query: 402 GLPLRIVMIGTLTGAQWGIYDAFKVM 325 GL R+V + Y+ FK + Sbjct: 330 GLVPRLVKVSPSCAIMISFYEYFKFL 355
>MFRN_CAEEL (Q23125) Mitoferrin| Length = 312 Score = 32.3 bits (72), Expect = 1.1 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 22/96 (22%) Frame = -3 Query: 543 AGGYIAGVFCAIVSHPADNLVSFLNNAKGAT------------------VGDAVKKI--- 427 AGG +AG A ++ P D + + LN + A + DAV+ I Sbjct: 211 AGG-LAGGLAAALTTPMDCVKTVLNTQQAAEADPANRRIFLQARYRYRGISDAVRTIYSQ 269 Query: 426 -GMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMV 322 G+ G F+ GL R++ T W +Y+ FK M+ Sbjct: 270 RGLSG-FSCGLQARVIFQVPATALSWSVYELFKFML 304
>SRFAA_BACSU (P27206) Surfactin synthetase subunit 1| Length = 3588 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +1 Query: 304 AGGRESHHNFKRIIDSPLSTSKSTN---HDDTKGEPSGEKAQHANLLNSIAHCSTLGIVE 474 A ES+H R + PL ++ N T G P G HAN+L ++ + L I E Sbjct: 1626 ADEEESYHADARNLALPLDSAAMANLTYTSGTTGTPKGNIVTHANILRTVKETNYLSITE 1685 Query: 475 E 477 + Sbjct: 1686 Q 1686
>LEP4_MYXXA (O30387) Type 4 prepilin-like proteins leader peptide-processing| enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)] Length = 335 Score = 32.0 bits (71), Expect = 1.5 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 264 LIFAAMTMYSWLWLLVDGTVSVTCLAPKIFCYCSRWLLSLS 142 L FA + + W + LV V V+ L P F W+L LS Sbjct: 95 LFFACLRRFGWTYELVPALVLVSLLVPLAFIDLDHWILPLS 135
>ESPC_ECO27 (Q9EZE7) Serine protease espC precursor (EC 3.4.21.-)| (EPEC-secreted protein C) Length = 1305 Score = 31.6 bits (70), Expect = 1.9 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Frame = +1 Query: 253 SKNQSS*FLYRSNWWSTAGGRESHHNF-------KRIIDSPLSTSKSTNHDDTKGEPSGE 411 S N S ++Y S +G E +H F + I+D + + N +++ G Sbjct: 508 SVNNQSNYMYHG---SVSGNTEINHQFDTQKNNSRLILDGNVDITNDINIKNSQLTMQGH 564 Query: 412 KAQHANLLNSIAHCSTLGIVEERDKVVSRMRNNSTENTGNVATSKADTQ 558 HA C G++ E+D V + ++ N N K + Q Sbjct: 565 ATSHAVFREGGVTCMLPGVICEKDYVSGIQQQENSANKNNNTDYKTNNQ 613
>TENR_CHICK (Q00546) Tenascin-R precursor (TN-R) (Restrictin)| Length = 1353 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Frame = -2 Query: 361 CSVGNL*CV*SYGGTP-DHRRCSTSCSGRGISLIDFCCYDDVFLVVVIGGWDC 206 C G C Y G RC +CSGRG+ C +D + GG DC Sbjct: 275 CDNGTCVCAEGYAGEDCGWLRCPNACSGRGVCQDGLCICEDGY-----GGQDC 322
>PALF_KLULA (Q6CTM7) pH-response regulator protein palF/RIM8| Length = 572 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 93 GGQKKAYFACLMSSSHLIETITICYNNKRFWVLNK*LIQSHPPI 224 GG+ K F+C ++ +L+ +I + R+WV + Q PPI Sbjct: 133 GGEHKFPFSCKINGKNLVSSIDFKKGSIRYWVQAELHAQKTPPI 176
>KUP_XANCP (Q8P6E6) Probable potassium transport system protein kup| Length = 635 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 398 SPLVKRPNMPIFLTASPTVAPLALLRN 478 +P + P M +FLTA P V P AL+ N Sbjct: 480 APPARVPGMAVFLTADPMVVPHALMHN 506
>M1_DHVI1 (Q01479) Matrix protein 1 (M1)| Length = 270 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = +2 Query: 35 LRSNSLAVLKLIMSSIKLSRGAKKGLFRLLNEFLSSDRDNNHLLQ*QKILGAKQVTDTV 211 L SN L K M+S+K AK GL + N S DR+ +L IL + + TV Sbjct: 73 LISNRLKGGKYDMNSVKKGYKAKDGLQEISNYISSLDREGKQVLACMLILSTQSIGKTV 131
>MFRN2_MOUSE (Q8R0Z5) Mitoferrin-2 (Mitochondrial iron transporter 2) (Solute| carrier family 25 member 28) (Mitochondrial RNA splicing protein 3/4 homolog) (MRS3/4) Length = 364 Score = 30.0 bits (66), Expect = 5.6 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 14/86 (16%) Frame = -3 Query: 537 GYIAGVFCAIVSHPADNLVSFLN---------NAKGATVGDA-----VKKIGMLGLFTRG 400 G AG A + P D + LN N G G A V ++G + + RG Sbjct: 268 GACAGAVAAAATTPLDVCKTLLNTQESLALNSNITGHITGMASAFRTVYQVGGVTAYFRG 327 Query: 399 LPLRIVMIGTLTGAQWGIYDAFKVMV 322 + R++ T W +Y+ FK ++ Sbjct: 328 VQARVIYQIPSTAIAWSVYEFFKYLI 353
>FA57B_MOUSE (Q7TNV1) Protein FAM57B| Length = 225 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -1 Query: 536 ATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAMLLRRLACWAFSPEGSP 393 A LP+ SV + + L + + L W L+ R AC F P GSP Sbjct: 169 AGLPLLSVPMAIPAHVNLGAALLLAPQLYWFFLICRGACRLFRPRGSP 216
>HDA4_CAEBR (Q613L4) Histone deacetylase 4| Length = 892 Score = 30.0 bits (66), Expect = 5.6 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%) Frame = +2 Query: 221 NNHNQEYIVIAAKINQADSSTGATGGAP---PVVGSPTITLNAS 343 ++ + + V+ A++ +A SSTG+TGGA PV+ S + L A+ Sbjct: 5 SSSSSSFPVVFARMEEASSSTGSTGGAMAGIPVIPSTSAALLAN 48
>ACHX_ONCVO (P54247) Acetylcholine receptor protein, non-alpha chain (Fragment)| Length = 436 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = -1 Query: 590 FRRPSAASLPSWVSALLVATLPVFSVLLFLIRLTTLSRSSTMPRVLQW 447 FRRPS +P WV L + LP +LF+ R T + + RV + Sbjct: 284 FRRPSTHRMPIWVKWLFLRILP---KILFMRRPTLIKVDEAVRRVADY 328
>YG5F_YEAST (P53320) Putative mitochondrial carrier YGR257C| Length = 366 Score = 29.6 bits (65), Expect = 7.2 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Frame = -3 Query: 549 SFAGGYIAGVFCAIVSHPADN-----LVSFLNNA--KGATVGDAVKKI--------GMLG 415 SFA G I+G+ AI +HP D +S +NN+ KG + K G+ Sbjct: 271 SFASGCISGMIAAICTHPFDVGKTRWQISMMNNSDPKGGNRSRNMFKFLETIWRTEGLAA 330 Query: 414 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVG 319 L+T GL R++ I Y+ K + G Sbjct: 331 LYT-GLAARVIKIRPSCAIMISSYEISKKVFG 361
>TM86A_BOVIN (Q3MHQ7) Transmembrane protein 86A| Length = 240 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = -1 Query: 611 STNTLFLFRRPSAASLPSWVSALLVATLPVFSVLLFLI 498 +T F+ PS++ PSWVSA L+ LP+F + LFL+ Sbjct: 21 ATCVYFVLWLPSSS--PSWVSA-LIKCLPIFCLWLFLL 55
>Y076_MYCPN (P75041) Hypothetical protein MG061 homolog 1 (R02_orf564o)| Length = 564 Score = 29.6 bits (65), Expect = 7.2 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = -3 Query: 435 KKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEESA*LIF 256 K IGM G+ +V++ LTG W I A G + P+ E A F Sbjct: 305 KMIGMYGICL------VVLVNPLTGGWWNILQAVSPASSFNVKDGVKTLKPL-EGAGGYF 357 Query: 255 AAMTMYSWLWLL 220 A + + LW+L Sbjct: 358 AGLPTLAILWVL 369
>TM86A_MOUSE (Q9D8N3) Transmembrane protein 86A| Length = 241 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = -1 Query: 611 STNTLFLFRRPSAASLPSWVSALLVATLPVFSVLLFLI 498 +T F+ PS++ PSWVSA L+ LP+F + LFL+ Sbjct: 21 ATCVYFVLWLPSSS--PSWVSA-LIKCLPIFCLWLFLL 55
>ACHA3_HUMAN (P32297) Neuronal acetylcholine receptor protein, alpha-3 subunit| precursor Length = 503 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = -1 Query: 590 FRRPSAASLPSWVSALLVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAML 438 +R P+ ++PSWV + + LP ++F+ R T+ ++ PR L A L Sbjct: 328 YRTPTTHTMPSWVKTVFLNLLP---RVMFMTRPTSNEGNAQKPRPLYGAEL 375
>NU4M_ACACA (Q37375) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 497 Score = 29.3 bits (64), Expect = 9.5 Identities = 13/36 (36%), Positives = 25/36 (69%) Frame = -1 Query: 542 LVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAMLL 435 LV+T+P+FS+ LF++ L+ +S T + ++ +LL Sbjct: 375 LVSTMPIFSLCLFILILSNISFPGTSSFIGEFLILL 410
>C43BP_BOVIN (Q9GKI7) Goodpasture antigen-binding protein (EC 2.7.11.9) (GPBP)| (Collagen type IV alpha-3-binding protein) (StAR-related lipid transfer protein 11) (StARD11) (START domain-containing protein 11) Length = 624 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = +1 Query: 352 PLSTSKSTNHDDTKGEPSGEKAQHANLLNSIAHCSTLGIVEERDKVVSRM 501 P T K N D KGE KA A +L +++HC L +V+ D RM Sbjct: 229 PHVTPKGINGIDFKGEAITFKATTAGILATLSHCIEL-MVKREDSWQKRM 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,587,263 Number of Sequences: 219361 Number of extensions: 2262872 Number of successful extensions: 6069 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5817 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6054 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
