ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC ... 100 5e-21
2YAE9_YEAST (P39721) Protein YAL049C 67 6e-11
3YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II 52 2e-06
4RTJK_DROME (P21328) RNA-directed DNA polymerase from mobile elem... 32 2.1
5NXF1_DROME (Q9U1H9) Nuclear RNA export factor 1 (Protein tip-ass... 31 2.8
6DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precur... 31 3.6
7Y2373_BACSK (Q5WFF2) UPF0348 protein ABC2373 30 8.0
8MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscl... 30 8.0
9METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31)... 30 8.0

>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)|
          Length = 303

 Score =  100 bits (248), Expect = 5e-21
 Identities = 46/96 (47%), Positives = 65/96 (67%)
 Frame = -3

Query: 631 WIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSF 452
           W++ H+  KA E+AKP+ AALK++G  SV   GYCWG K+  E+ K ++++   +SHP  
Sbjct: 119 WLEAHSPVKAAEDAKPLFAALKKEG-KSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYS 177

Query: 451 VTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVL 344
           VT DD+KEVK PI +LGA+ D  +PP+ V  F  VL
Sbjct: 178 VTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213



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>YAE9_YEAST (P39721) Protein YAL049C|
          Length = 246

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
 Frame = -3

Query: 631 WIKEHTAGKAFEEAKPVIAALK-EQGASSVGAAGYCWGAKVVAELAKANE--IQTAVMSH 461
           W + H+     +     +  LK E     +G  GYC+GAK   +    +      A ++H
Sbjct: 95  WFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGDGGLANAAAIAH 154

Query: 460 PSFVTVDDIKEV--KCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHG 287
           PSFV++++I+ +  K PI +  AE D + P  L    E+ L  N    + + +F GV+HG
Sbjct: 155 PSFVSIEEIEAIDSKKPILISAAEEDHIFPANLRHLTEEKLKDNHA-TYQLDLFSGVAHG 213

Query: 286 WTVRYNGEDAAAVKSAEEALTDMIDWFN 203
           +  R +    A   + E+ L D I WFN
Sbjct: 214 FAARGDISIPAVKYAKEKVLLDQIYWFN 241



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>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II|
          Length = 249

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
 Frame = -3

Query: 592 AKPVIAALKEQGAS-SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCP 416
           AK V A     G + ++G  G+CWGAKV+       +       HPSF    D   V CP
Sbjct: 117 AKVVEAVRANHGPNVTIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCP 176

Query: 415 IAVLGAETDVMSPPELVKEFEQVLSSNSGIA-HFVKIFPGVSHGW 284
           +  L ++ +     +++KE+E+   +N   A    + F  + HGW
Sbjct: 177 VLFLCSKDE---DAKIIKEWEEAFKTNPAYAKSSFETFSDMFHGW 218



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>RTJK_DROME (P21328) RNA-directed DNA polymerase from mobile element jockey (EC|
           2.7.7.49) (Reverse transcriptase)
          Length = 916

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = -3

Query: 460 PSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWT 281
           P+   V ++ E    IA    +T V++      + + +L++ SG+  ++  F   +  W 
Sbjct: 661 PTHTPVTEVDEEDVLIATYADDTAVLT------KSKSILAATSGLQEYLDAFQQWAENWN 714

Query: 280 VRYNGEDAAAVKSA 239
           VR N E  A V  A
Sbjct: 715 VRINAEKCANVTFA 728



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>NXF1_DROME (Q9U1H9) Nuclear RNA export factor 1 (Protein tip-associating)|
           (Protein small bristles) (DmNXF1)
          Length = 672

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
 Frame = -3

Query: 517 KVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPI---AVLGAETDVM--SPPELVKEFE 353
           K+   +AK   IQT  +    F    D+K+V CP+    V+GA  D+M  + P+L     
Sbjct: 202 KMKVTMAKRYNIQTKALDLSRFHADPDLKQVFCPLFRQNVMGAAIDIMCDNIPDL----- 256

Query: 352 QVLSSNSGIAHFVKIFPGV 296
           + L+ N      ++ F GV
Sbjct: 257 EALNLNDNSISSMEAFKGV 275



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>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC|
           3.1.1.45) (Dienelactone hydrolase) (DLH)
          Length = 291

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
 Frame = -3

Query: 547 VGAAGYCWGAKVVAELAKAN-EIQTAVMSHPSFV----------TVDDIKEVKCPIAVLG 401
           +G  G+CWG ++    A  N  ++  V  +   V           VD   ++K P+  L 
Sbjct: 164 LGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLY 223

Query: 400 AETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTD 221
              D   P   +   ++   +      FV ++P   H +   Y     A  + A++    
Sbjct: 224 GGADQGIPVATIDRMKEACRAAGKTCDFV-VYPEAGHAFHADYRPSYRA--EPAQDGWKR 280

Query: 220 MIDWFNK 200
           + DWF +
Sbjct: 281 LQDWFRQ 287



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>Y2373_BACSK (Q5WFF2) UPF0348 protein ABC2373|
          Length = 405

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = -3

Query: 523 GAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEF--EQ 350
           GA +V EL  A  +QTA       VT+  +  ++C +   G+E   ++P   + EF  + 
Sbjct: 63  GADLVVELPYAYSVQTAERFAEGAVTI--LAALRCSVLNFGSEKGEIAPFYALAEFMNDH 120

Query: 349 VLSSNSGIAHFVKIFPGVSH 290
            ++ N  +  F+K   GVS+
Sbjct: 121 QVAFNHHVKQFLK--DGVSY 138



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>MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscle, 25 kDa|
           isoform (LC25)
          Length = 195

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 18/152 (11%)
 Frame = -3

Query: 598 EEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQ------TAV-MSHPSFVTVD 440
           EEA    AA  E+ A +  AA       V A L K N+IQ      T +       +  D
Sbjct: 20  EEAPAAAAAPAEEAAPTPSAAPIHKVGNVFA-LFKQNQIQEFKEAFTMIDQDRDGIIGPD 78

Query: 439 DIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGED 260
           D+  +      +G E D    P++VKE     +      HF+ +F    HG        D
Sbjct: 79  DLGNI---FQQIGREVD----PKVVKEMLAESAEKLNFTHFLTLFGEKLHGTDTEGTLRD 131

Query: 259 AAAV-----------KSAEEALTDMIDWFNKN 197
           A A+           +  ++ LT++ D +NK+
Sbjct: 132 AFALFDEDKLGYLLEEYVKDLLTNVGDQYNKD 163



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>METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 374

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -3

Query: 433 KEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSH 290
           ++  CP   +G  +D + PP  V+E  ++++   G A + +I     H
Sbjct: 300 RDFPCPCLGIGISSDFLFPPYQVQEIVRMINDGGGHARYAEIDSPYGH 347


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,756,510
Number of Sequences: 219361
Number of extensions: 1798345
Number of successful extensions: 5130
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5126
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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