| Clone Name | rbaal6j21 |
|---|---|
| Clone Library Name | barley_pub |
>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 100 bits (248), Expect = 5e-21 Identities = 46/96 (47%), Positives = 65/96 (67%) Frame = -3 Query: 631 WIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSF 452 W++ H+ KA E+AKP+ AALK++G SV GYCWG K+ E+ K ++++ +SHP Sbjct: 119 WLEAHSPVKAAEDAKPLFAALKKEG-KSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYS 177 Query: 451 VTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVL 344 VT DD+KEVK PI +LGA+ D +PP+ V F VL Sbjct: 178 VTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 66.6 bits (161), Expect = 6e-11 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 5/148 (3%) Frame = -3 Query: 631 WIKEHTAGKAFEEAKPVIAALK-EQGASSVGAAGYCWGAKVVAELAKANE--IQTAVMSH 461 W + H+ + + LK E +G GYC+GAK + + A ++H Sbjct: 95 WFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGDGGLANAAAIAH 154 Query: 460 PSFVTVDDIKEV--KCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHG 287 PSFV++++I+ + K PI + AE D + P L E+ L N + + +F GV+HG Sbjct: 155 PSFVSIEEIEAIDSKKPILISAAEEDHIFPANLRHLTEEKLKDNHA-TYQLDLFSGVAHG 213 Query: 286 WTVRYNGEDAAAVKSAEEALTDMIDWFN 203 + R + A + E+ L D I WFN Sbjct: 214 FAARGDISIPAVKYAKEKVLLDQIYWFN 241
>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II| Length = 249 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Frame = -3 Query: 592 AKPVIAALKEQGAS-SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCP 416 AK V A G + ++G G+CWGAKV+ + HPSF D V CP Sbjct: 117 AKVVEAVRANHGPNVTIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCP 176 Query: 415 IAVLGAETDVMSPPELVKEFEQVLSSNSGIA-HFVKIFPGVSHGW 284 + L ++ + +++KE+E+ +N A + F + HGW Sbjct: 177 VLFLCSKDE---DAKIIKEWEEAFKTNPAYAKSSFETFSDMFHGW 218
>RTJK_DROME (P21328) RNA-directed DNA polymerase from mobile element jockey (EC| 2.7.7.49) (Reverse transcriptase) Length = 916 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/74 (25%), Positives = 34/74 (45%) Frame = -3 Query: 460 PSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWT 281 P+ V ++ E IA +T V++ + + +L++ SG+ ++ F + W Sbjct: 661 PTHTPVTEVDEEDVLIATYADDTAVLT------KSKSILAATSGLQEYLDAFQQWAENWN 714 Query: 280 VRYNGEDAAAVKSA 239 VR N E A V A Sbjct: 715 VRINAEKCANVTFA 728
>NXF1_DROME (Q9U1H9) Nuclear RNA export factor 1 (Protein tip-associating)| (Protein small bristles) (DmNXF1) Length = 672 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = -3 Query: 517 KVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPI---AVLGAETDVM--SPPELVKEFE 353 K+ +AK IQT + F D+K+V CP+ V+GA D+M + P+L Sbjct: 202 KMKVTMAKRYNIQTKALDLSRFHADPDLKQVFCPLFRQNVMGAAIDIMCDNIPDL----- 256 Query: 352 QVLSSNSGIAHFVKIFPGV 296 + L+ N ++ F GV Sbjct: 257 EALNLNDNSISSMEAFKGV 275
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Frame = -3 Query: 547 VGAAGYCWGAKVVAELAKAN-EIQTAVMSHPSFV----------TVDDIKEVKCPIAVLG 401 +G G+CWG ++ A N ++ V + V VD ++K P+ L Sbjct: 164 LGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLY 223 Query: 400 AETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTD 221 D P + ++ + FV ++P H + Y A + A++ Sbjct: 224 GGADQGIPVATIDRMKEACRAAGKTCDFV-VYPEAGHAFHADYRPSYRA--EPAQDGWKR 280 Query: 220 MIDWFNK 200 + DWF + Sbjct: 281 LQDWFRQ 287
>Y2373_BACSK (Q5WFF2) UPF0348 protein ABC2373| Length = 405 Score = 29.6 bits (65), Expect = 8.0 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = -3 Query: 523 GAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEF--EQ 350 GA +V EL A +QTA VT+ + ++C + G+E ++P + EF + Sbjct: 63 GADLVVELPYAYSVQTAERFAEGAVTI--LAALRCSVLNFGSEKGEIAPFYALAEFMNDH 120 Query: 349 VLSSNSGIAHFVKIFPGVSH 290 ++ N + F+K GVS+ Sbjct: 121 QVAFNHHVKQFLK--DGVSY 138
>MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscle, 25 kDa| isoform (LC25) Length = 195 Score = 29.6 bits (65), Expect = 8.0 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Frame = -3 Query: 598 EEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQ------TAV-MSHPSFVTVD 440 EEA AA E+ A + AA V A L K N+IQ T + + D Sbjct: 20 EEAPAAAAAPAEEAAPTPSAAPIHKVGNVFA-LFKQNQIQEFKEAFTMIDQDRDGIIGPD 78 Query: 439 DIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGED 260 D+ + +G E D P++VKE + HF+ +F HG D Sbjct: 79 DLGNI---FQQIGREVD----PKVVKEMLAESAEKLNFTHFLTLFGEKLHGTDTEGTLRD 131 Query: 259 AAAV-----------KSAEEALTDMIDWFNKN 197 A A+ + ++ LT++ D +NK+ Sbjct: 132 AFALFDEDKLGYLLEEYVKDLLTNVGDQYNKD 163
>METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 374 Score = 29.6 bits (65), Expect = 8.0 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = -3 Query: 433 KEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSH 290 ++ CP +G +D + PP V+E ++++ G A + +I H Sbjct: 300 RDFPCPCLGIGISSDFLFPPYQVQEIVRMINDGGGHARYAEIDSPYGH 347 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,756,510 Number of Sequences: 219361 Number of extensions: 1798345 Number of successful extensions: 5130 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4967 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5126 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)