ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11o19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4 47 5e-05
2YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12 47 6e-05
3PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-bin... 45 2e-04
4SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Ser... 43 9e-04
5SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (S... 43 9e-04
6SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (S... 43 9e-04
7SGN1_YEAST (P40561) RNA-binding protein SGN1 43 9e-04
8PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-bi... 42 0.001
9PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-bi... 42 0.001
10PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-bi... 42 0.001
11SYS_PSESM (Q87ZS9) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 41 0.003
12PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi... 40 0.010
13G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protei... 39 0.013
14G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protei... 39 0.013
15ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (... 39 0.013
16SYS_PSEAE (Q9I0M6) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 39 0.017
17RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin... 39 0.022
18PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g... 39 0.022
19G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protei... 38 0.028
20PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 ... 38 0.037
21PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 ... 38 0.037
22RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri... 38 0.037
23G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protei... 37 0.048
24RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-ri... 37 0.063
25MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 37 0.063
26PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 ... 36 0.11
27DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp... 36 0.14
28DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp... 36 0.14
29ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ... 35 0.18
30ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ... 35 0.18
31DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp... 35 0.18
32RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co... 35 0.18
33RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He... 35 0.18
34YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in c... 35 0.24
35MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote... 35 0.24
36RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C... 35 0.31
37MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2) 35 0.31
38MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing prote... 34 0.41
39IKBA_HUMAN (P25963) NF-kappa-B inhibitor alpha (Major histocompa... 34 0.41
40RNP4F_DROME (Q9W4D2) RNA-binding protein 4F 34 0.41
41NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting... 34 0.41
42RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h... 34 0.53
43PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 34 0.53
44ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1 33 0.70
45MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 33 0.70
46PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi... 33 0.91
47RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri... 33 0.91
48RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interact... 33 0.91
49PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi... 33 1.2
50PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi... 33 1.2
51PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi... 33 1.2
52PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi... 33 1.2
53PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi... 33 1.2
54GAR2_SCHPO (P41891) Protein gar2 33 1.2
55SYS_PSEPK (Q88FT2) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 33 1.2
56IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B ... 33 1.2
57G3BP_SCHPO (O94260) Putative G3BP-like protein 33 1.2
58PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin... 33 1.2
59NAM8_YEAST (Q00539) Protein NAM8 32 1.5
60UAP2_SCHPO (O43120) Splicing factor U2AF-associated protein 2 32 1.5
61SF1L1_BRARE (Q7SXP4) Splicing factor, arginine/serine-rich 1-lik... 32 1.5
62PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 ... 32 1.5
63MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote... 32 1.5
64CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip... 32 1.5
65SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9 32 2.0
66SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pr... 32 2.0
67RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin... 32 2.0
68ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP) 32 2.0
69SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1 32 2.0
70PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi... 32 2.0
71SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1 32 2.0
72SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1 32 2.0
73SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pr... 32 2.0
74SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1 32 2.0
75HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (... 32 2.0
76SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein) 32 2.0
77SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9 32 2.6
78MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156) 32 2.6
79MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote... 32 2.6
80SYS_ACIAD (Q6F8G5) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 32 2.6
81SFRS1_BRARE (Q6NYA0) Splicing factor, arginine/serine-rich 1 32 2.6
82NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO... 32 2.6
83PTBP2_ARATH (Q9FGL9) Polypyrimidine tract-binding protein homolog 2 32 2.6
84SYS_XYLFA (Q9PB58) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 32 2.6
85RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h... 32 2.6
86IKBA_PIG (Q08353) NF-kappa-B inhibitor alpha (I-kappa-B-alpha) (... 31 3.5
87ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor 31 3.5
88U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 aux... 31 3.5
89RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro... 31 3.5
90MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing prote... 31 3.5
91IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B ... 31 3.5
92SYS_XYLFT (Q87BX8) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 31 3.5
93PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind... 31 3.5
94PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi... 31 3.5
95PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi... 31 3.5
96PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi... 31 3.5
97PM14_CAEEL (Q8ITY4) Pre-mRNA branch site p14-like protein 31 4.5
98MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote... 31 4.5
99RAVR1_HUMAN (Q8IY67) Protein raver-1 31 4.5
100SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 31 4.5
101WHI3_YEAST (P34761) Protein WHI3 31 4.5
102YHC3_YEAST (P38742) Hypothetical 130.0 kDa protein in SNF6-SPO11... 31 4.5
103PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyl... 31 4.5
104MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA... 30 5.9
105PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi... 30 5.9
106MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog) (SMA... 30 5.9
107HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn... 30 5.9
108LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain... 30 5.9
109SYS_BACHD (Q9KGN4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 30 5.9
110SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized ... 30 5.9
111HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (... 30 5.9
112PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-... 30 5.9
113GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ... 30 5.9
114SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized ... 30 5.9
115RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p... 30 5.9
116IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha) (... 30 7.7
117IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)... 30 7.7
118TRA2_DROVI (O02008) Transformer-2 sex-determining protein 30 7.7
119POXM_DROME (P23757) Paired box pox-meso protein (Paired box meso... 30 7.7
120HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (... 30 7.7 
>YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4|
          Length = 237

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 26/81 (32%), Positives = 44/81 (54%)
 Frame = -2

Query: 705 VDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQS 526
           +DA +V++ N+  ++T  ++EE FK  G I    I       +   + +IEF+D+SS+++
Sbjct: 98  IDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIEN 157

Query: 525 ALAASPVTIDDRPCHVEEKRT 463
           AL  +      RP  V  KRT
Sbjct: 158 ALVMNGSLFRSRPIVVTAKRT 178
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>YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12|
          Length = 197

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 26/81 (32%), Positives = 44/81 (54%)
 Frame = -2

Query: 705 VDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQS 526
           +DA +V++ N+  ++T  ++EE FK  G I    I       +   + +IEF+D+SS+++
Sbjct: 58  IDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIEN 117

Query: 525 ALAASPVTIDDRPCHVEEKRT 463
           AL  +      RP  V  KRT
Sbjct: 118 ALVMNGSLFRSRPIVVTAKRT 138
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>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (Poly(A)-binding protein II) (PABII)
          Length = 166

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = -2

Query: 705 VDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGF--IEFEDASSV 532
           +DA +VYV N+    TP +L+  F   G++    + +   K  G   GF  IEF + S V
Sbjct: 52  IDAQSVYVGNVDYSVTPEELQSHFASCGSVNR--VTILCDKFTGHPKGFAYIEFSEPSLV 109

Query: 531 QSALAASPVTIDDRPCHVEEKRT 463
            +AL  +   + +RP  V  KRT
Sbjct: 110 PNALLLNGSMLHERPLKVTPKRT 132
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>SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (SR-related protein of 86 kDa)
          Length = 494

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -2

Query: 723 NIQDPEVDAL--AVYVKNLPLHATPS-QLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           N+   ++D +   VYV NL    T + QL E FK+ G +K   +++   + Q   + F+E
Sbjct: 58  NVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKF--VRMAGDETQPTRFAFVE 115

Query: 552 FEDASSVQSALAASPVTIDDRPCHV 478
           F D +SV  ALA + V   DRP  +
Sbjct: 116 FADQNSVPRALAFNGVMFGDRPLKI 140
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>SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86)
          Length = 494

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -2

Query: 723 NIQDPEVDAL--AVYVKNLPLHATPS-QLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           N+   ++D +   VYV NL    T + QL E FK+ G +K   +++   + Q   + F+E
Sbjct: 58  NVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKF--VRMAGDETQPTRFAFVE 115

Query: 552 FEDASSVQSALAASPVTIDDRPCHV 478
           F D +SV  ALA + V   DRP  +
Sbjct: 116 FADQNSVPRALAFNGVMFGDRPLKI 140
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>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (Splicing regulatory protein 508) (SRrp508)
          Length = 508

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -2

Query: 723 NIQDPEVDAL--AVYVKNLPLHATPS-QLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           N+   ++D +   VYV NL    T + QL E FK+ G +K   +++   + Q   + F+E
Sbjct: 55  NVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKF--VRMAGDETQPTRFAFVE 112

Query: 552 FEDASSVQSALAASPVTIDDRPCHV 478
           F D +SV  ALA + V   DRP  +
Sbjct: 113 FADQNSVPRALAFNGVMFGDRPLKI 137
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>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 26/90 (28%), Positives = 42/90 (46%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           E  +    E D+ +++V N+    TP Q+E+ FK  G IK   +    +      YG+IE
Sbjct: 52  EEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIE 111

Query: 552 FEDASSVQSALAASPVTIDDRPCHVEEKRT 463
           FE  +  + AL  +   +  +   V  KRT
Sbjct: 112 FESPAYREKALQLNGGELKGKKIAVSRKRT 141
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>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGF--IEFEDASS 535
           E DA ++YV N+   AT  +LE  F   G++    + +   K  G   GF  IEF D  S
Sbjct: 167 EADARSIYVGNVDYGATAEELEAHFHGCGSVNR--VTILCDKFSGHPKGFAYIEFSDKES 224

Query: 534 VQSALAASPVTIDDRPCHVEEKRT 463
           V+++LA        R   V  KRT
Sbjct: 225 VRTSLALDESLFRGRQIKVIPKRT 248
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>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA-binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGF--IEFEDASS 535
           E DA ++YV N+   AT  +LE  F   G++    + +   K  G   GF  IEF D  S
Sbjct: 167 EADARSIYVGNVDYGATAEELEAHFHGCGSVNR--VTILCDKFSGHPKGFAYIEFSDKES 224

Query: 534 VQSALAASPVTIDDRPCHVEEKRT 463
           V+++LA        R   V  KRT
Sbjct: 225 VRTSLALDESLFRGRQIKVIPKRT 248
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>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 301

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGF--IEFEDASS 535
           E DA ++YV N+   AT  +LE  F   G++    + +   K  G   GF  IEF D  S
Sbjct: 163 EADARSIYVGNVDYGATAEELEAHFHGCGSVNR--VTILCDKFSGHPKGFAYIEFSDKES 220

Query: 534 VQSALAASPVTIDDRPCHVEEKRT 463
           V+++LA        R   V  KRT
Sbjct: 221 VRTSLALDESLFRGRQIKVIPKRT 244
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>SYS_PSESM (Q87ZS9) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEEE----FKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           E+DAL + + NLP  + P   +EE     +R+GT    G +V+ H   G  +G+++FE A
Sbjct: 95  ELDALVLNIPNLPHESVPVGADEEGNVEVRRWGTPTAFGFEVKDHVALGEKFGWLDFETA 154

Query: 540 SSVQSA 523
           + +  A
Sbjct: 155 AKLSGA 160
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>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           VYVKNLP      +L + F +FG I    + +R       C+GF+ FE   +  SA+
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVIS-SAVVMRDQSGNSRCFGFVNFECTEAAASAV 286



 Score = 31.6 bits (70), Expect = 2.6
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR-SHKIQGFCYGFIEFEDASSVQSAL 520
           +++KNL        L E F  FGTI    + +  + + +G  YGF++FE   S Q+A+
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKG--YGFVQFEKEESAQAAI 193
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>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           D+  ++V NLP     ++L+E F  FG +    I  +    +   +GF+ F+D+  VQ  
Sbjct: 329 DSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRI 388

Query: 522 LAASPVTI-DDRPCHVEEKRT 463
           L A P+    +   +VEEK+T
Sbjct: 389 LIAKPIMFRGEVRLNVEEKKT 409
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>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           D+  ++V NLP     ++L+E F  FG +    I  +    +   +GF+ F+D+  VQ  
Sbjct: 329 DSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRI 388

Query: 522 LAASPVTI-DDRPCHVEEKRT 463
           L A P+    +   +VEEK+T
Sbjct: 389 LIAKPIMFRGEVRLNVEEKKT 409
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>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 21/75 (28%), Positives = 37/75 (49%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           +++  L +  + S L   F+ FGT+    + V     +  C+GF+ + +     +A+AAS
Sbjct: 9   LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAAS 68

Query: 510 PVTIDDRPCHVEEKR 466
           P  +D     VE KR
Sbjct: 69  PHAVDGNT--VELKR 81
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>SYS_PSEAE (Q9I0M6) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 38.9 bits (89), Expect = 0.017
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEE----EFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           E+DA+ + + NLP  + P   +E    E +R+GT K    +V+ H   G  +G+++FE A
Sbjct: 95  ELDAMLLGIPNLPHESVPVGADEDANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETA 154

Query: 540 SSVQSA 523
           + +  A
Sbjct: 155 AKLSGA 160
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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 38.5 bits (88), Expect = 0.022
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHK---IQGFCYG 562
           E    ++  +    +++KNL    T  +L+E F + GT+K   I  + +K   +    +G
Sbjct: 718 EEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFG 777

Query: 561 FIEFEDASSVQSAL 520
           F+E+      Q AL
Sbjct: 778 FVEYRKPEQAQKAL 791
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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 38.5 bits (88), Expect = 0.022
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGI-QVRSHKIQGFCYGFIEFEDASSVQSALAA 514
           V+VKNLP   T + L++ FK+FG I    +  +   K +G  YGF++FE   +  +A+  
Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRG--YGFVQFEQEDAAHAAIQT 171

Query: 513 SPVTI 499
              TI
Sbjct: 172 LNSTI 176
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>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC|
           3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP
           SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII)
          Length = 465

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           D+  +++ NLP     S+L++ F+ FG +    I     K+  F  GF+ F+D+  VQ  
Sbjct: 336 DSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRIN-SGGKLPNF--GFVVFDDSEPVQKV 392

Query: 522 LAASPVTIDDR-PCHVEEKRT 463
           L+  P+        +VEEK+T
Sbjct: 393 LSNRPIMFRGAVRLNVEEKKT 413
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>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4)
          Length = 492

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = -2

Query: 726 SNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKI-QGFCYGFIEF 550
           ++I+ PE     ++V  L    T   LE  F RFG I+   + +R  K  +  CY FIEF
Sbjct: 233 ADIKPPEN---VLFVCKLNPVTTDEDLEIIFSRFGPIRSCEV-IRDWKTGESLCYAFIEF 288

Query: 549 EDASSVQSA-LAASPVTIDDRPCHVE 475
           E     + A      V IDDR  HV+
Sbjct: 289 EKEEDCEKAFFKMDNVLIDDRRIHVD 314
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>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4)
          Length = 492

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = -2

Query: 726 SNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKI-QGFCYGFIEF 550
           ++I+ PE     ++V  L    T   LE  F RFG I+   + +R  K  +  CY FIEF
Sbjct: 233 ADIKPPEN---VLFVCKLNPVTTDEDLEIIFSRFGPIRSCEV-IRDWKTGESLCYAFIEF 288

Query: 549 EDASSVQSA-LAASPVTIDDRPCHVE 475
           E     + A      V IDDR  HV+
Sbjct: 289 EKEEDCEKAFFKMDNVLIDDRRIHVD 314
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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL-AA 514
           VYV NLP      ++E+ F ++G IK+  + ++S +  G  + F+EFED    + A+ A 
Sbjct: 11  VYVGNLPGDVREKEVEDIFHKYGRIKY--VDIKSGR--GPAFAFVEFEDHRDAEDAVRAR 66

Query: 513 SPVTIDDRPCHVEEKR 466
                D R   VE  R
Sbjct: 67  DGYEFDGRRIRVEFTR 82
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>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC|
           3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP
           SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII)
          Length = 466

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           D+  +++ NLP     S+L++ F+ +G +    I     K+  F  GF+ F+D+  VQ  
Sbjct: 338 DSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRIN-SGGKLPNF--GFVVFDDSEPVQKV 394

Query: 522 LAASPVTI-DDRPCHVEEKRT 463
           L+  P+    +   +VEEK+T
Sbjct: 395 LSNRPIMFRGEVRLNVEEKKT 415
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>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6|
           (RNA-binding protein srp-1) (CeSRp20)
          Length = 179

 Score = 37.0 bits (84), Expect = 0.063
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAA 514
           VYV  LP  AT  +LEE F RFG I+   +   + +  GF   F+E++D    + A+ A
Sbjct: 5   VYVGGLPSDATSQELEEIFDRFGRIRKVWV---ARRPPGF--AFVEYDDVRDAEDAVRA 58
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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 37.0 bits (84), Expect = 0.063
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
 Frame = -2

Query: 726 SNIQDPEVD--------ALAVYVKNLPLHATPSQLEEEFKRFGTIK--HDGIQVRSHKIQ 577
           S++++ EVD        +  ++V+NLP  A+ S LE  F +FG I+  H     RS   +
Sbjct: 283 SSVEEEEVDTNIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSK 342

Query: 576 GFCY 565
           GF Y
Sbjct: 343 GFAY 346



 Score = 30.4 bits (67), Expect = 5.9
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
 Frame = -2

Query: 714 DPEVDALAVYVKNLPLHATPSQLEEEFKRF-----GTIKHDGIQVRSHKIQGFCYGFIEF 550
           D  V    ++VKNL    T  +  E FK         IK      R  K     +GF++F
Sbjct: 591 DEPVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDF 650

Query: 549 EDASSVQSALAA 514
              +  Q+ALAA
Sbjct: 651 RTKAQAQAALAA 662
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>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 494

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKI-QGFCYGFIEFEDASSVQSALA- 517
           ++V  L    T   LE  F RFG I    + +R  K      Y FIEFED  S + A + 
Sbjct: 255 LFVCKLNPVTTDEDLELIFSRFGKILSCEV-IRDQKTGDSLQYAFIEFEDKKSCEEAYSK 313

Query: 516 ASPVTIDDRPCHVE 475
              V IDDR  HV+
Sbjct: 314 MDSVLIDDRRIHVD 327
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>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           ++V  +P +   ++L E FK+FG +    +   + K +   +GFI FED  SV  A+
Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171



 Score = 33.9 bits (76), Expect = 0.53
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           ++V  L    T   L   F ++G +    I       Q   +GF++F+D + V + LA+ 
Sbjct: 12  LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71

Query: 510 PVTIDDR 490
           P T+D R
Sbjct: 72  PHTLDGR 78
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>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           ++V  +P +   ++L E FK+FG +    +   + K +   +GFI FED  SV  A+
Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171



 Score = 33.9 bits (76), Expect = 0.53
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           ++V  L    T   L   F ++G +    I       Q   +GF++F+D + V + LA+ 
Sbjct: 12  LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71

Query: 510 PVTIDDR 490
           P T+D R
Sbjct: 72  PHTLDGR 78
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>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 22/78 (28%), Positives = 38/78 (48%)
 Frame = -2

Query: 723 NIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFED 544
           N    E DA  ++V  L    +   L++ F +FG +    I++  +  +   +GFI F+D
Sbjct: 66  NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125

Query: 543 ASSVQSALAASPVTIDDR 490
           +SSV+  L      +D R
Sbjct: 126 SSSVEKVLDQKEHRLDGR 143
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>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 22/78 (28%), Positives = 38/78 (48%)
 Frame = -2

Query: 723 NIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFED 544
           N    E DA  ++V  L    +   L++ F +FG +    I++  +  +   +GFI F+D
Sbjct: 59  NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 118

Query: 543 ASSVQSALAASPVTIDDR 490
           A+SV+  L      +D R
Sbjct: 119 AASVEKVLDQKEHRLDGR 136
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>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           ++V  +P +   ++L+E F RFG +    +   + K +   +GFI FED  SV  A+
Sbjct: 116 IFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172



 Score = 33.9 bits (76), Expect = 0.53
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           ++V  L    T   L   F ++G +    I       Q   +GF++F+D + V + LA+ 
Sbjct: 12  LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71

Query: 510 PVTIDDR 490
           P T+D R
Sbjct: 72  PHTLDGR 78
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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = -2

Query: 729 SSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEF 550
           ++N+Q      + +YV +L  + T   L   F+ FG I+   + + S   +   YGFI F
Sbjct: 239 ANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITF 298

Query: 549 EDASSVQSAL 520
            D+   + AL
Sbjct: 299 SDSECAKKAL 308
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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = -2

Query: 729 SSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEF 550
           ++N+Q      + +YV +L  + T   L   F+ FG I+   + + S   +   YGFI F
Sbjct: 239 ANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITF 298

Query: 549 EDASSVQSAL 520
            D+   + AL
Sbjct: 299 SDSECAKKAL 308
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>YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in chromosome III|
          Length = 654

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           V++ NLP      ++EE F +FG I+H  I++ S K   F + F+   DA  V   L+  
Sbjct: 301 VFIGNLPSSYHEKEIEEAFGKFGKIEH--IKILSKKNIAFVH-FLNIRDAIKVVRTLSCD 357

Query: 510 P 508
           P
Sbjct: 358 P 358
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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRF-----GTIKHDGIQVRSHKIQGFC 568
           E++ I  P V   +++VKNL    T +QL E+FK F       +K       S K     
Sbjct: 603 EATAIDGPTV---SIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMG 659

Query: 567 YGFIEFEDASSVQSALAASPVTIDD 493
           +GFIEF       + +AA    + D
Sbjct: 660 FGFIEFRTKEQAGAVIAAMDGAVID 684
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>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 17/73 (23%), Positives = 35/73 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           V++  LP + T + L   F R+G +    I     K +   +GF+ FE+ SSV+      
Sbjct: 98  VFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNER 157

Query: 510 PVTIDDRPCHVEE 472
            + ++ +   +++
Sbjct: 158 YINLNGKQVEIKK 170



 Score = 33.1 bits (74), Expect = 0.91
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAAS 511
           ++V  L    T   L   F RFG I    +   +   +   +GF+ F D ++V   L   
Sbjct: 9   LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNG 68

Query: 510 PVTIDDR-----PCH 481
           P T+D R     PC+
Sbjct: 69  PHTLDGRTIDPKPCN 83
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>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)|
          Length = 591

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           ++V+NLP   T  +L+E+F + G +    I++ + K +G   G + FE A S + A
Sbjct: 516 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKG--CGTVRFESAESAEKA 569
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>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1|
          Length = 861

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFG-----TIKHDGIQVRSHKIQGFC 568
           E  + Q  +   +++++KNL    T  QL + FK F       +K      + +K+    
Sbjct: 628 EDEDEQVVDGPTVSIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMG 687

Query: 567 YGFIEFEDASSVQSALAASPVTIDD 493
           +GF+EF       + ++A   T+ D
Sbjct: 688 FGFVEFRTKEQATAVISAMDGTVID 712
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>IKBA_HUMAN (P25963) NF-kappa-B inhibitor alpha (Major histocompatibility|
           complex enhancer-binding protein MAD3) (I-kappa-B-alpha)
           (IkappaBalpha) (IKB-alpha)
          Length = 317

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 336 SCTRP-FHSLSLQCNYHGLSCLHLGSCHLY 422
           SCT P  HS+    NY+G +CLHL S H Y
Sbjct: 166 SCTTPHLHSILKATNYNGHTCLHLASIHGY 195
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>RNP4F_DROME (Q9W4D2) RNA-binding protein 4F|
          Length = 941

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHK-IQGFCYGFI 556
           ES+    P ++   ++V+NL    +  +L E F  FGTIK   +  + +K  +G  Y  +
Sbjct: 712 ESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKGIAY--V 769

Query: 555 EFEDASSVQSALA 517
           EFE     Q A+A
Sbjct: 770 EFEKPGEAQRAVA 782
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>NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting suppressor 1|
           protein) (Nuclear polyadenylated RNA-binding protein 1)
          Length = 414

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 22/66 (33%), Positives = 33/66 (50%)
 Frame = -2

Query: 717 QDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDAS 538
           Q+ E+    ++V+  PL    S+L E F  FG +K   I      + GF   F+EFE+A 
Sbjct: 118 QEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKI------LNGFA--FVEFEEAE 169

Query: 537 SVQSAL 520
           S   A+
Sbjct: 170 SAAKAI 175
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>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 33.9 bits (76), Expect = 0.53
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR---SHKIQGFCYGFIEFEDASSVQSAL 520
           +++  L    T   L   ++++GT+  D + +R   S + +GF  GF+ F   + V +A+
Sbjct: 11  LFIGGLSFETTEESLRNYYEQWGTLT-DCVVMRDPASKRSRGF--GFVTFSCMNEVDAAM 67

Query: 519 AASPVTIDDRPCHVEEKR 466
           A  P TID R   VE KR
Sbjct: 68  ATRPHTIDGRV--VEPKR 83
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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 33.9 bits (76), Expect = 0.53
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -2

Query: 726 SNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSH-KIQGFCYGFIEF 550
           S +++ +     +YVKN+    T  Q +E F +FG I    ++  +  K++GF  GF+ +
Sbjct: 208 SQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF--GFVNY 265

Query: 549 EDASSVQSALAA 514
           E       A+ A
Sbjct: 266 EKHEDAVKAVEA 277
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>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGI--QVRSHKIQGFCYGF 559
           +  N  +  V    +YV  +    T   L E F ++GT+    I     + K +GF  GF
Sbjct: 102 DDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGF--GF 159

Query: 558 IEFEDASSVQSALAASPVTIDDRPCHVEE 472
           + F+D  SV   +      ++   C V +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
 Frame = -2

Query: 729 SSNIQDPEV---DALAVYVKNLPLHATPSQLEEEFKRF-----GTIKHDGIQVRSHKIQG 574
           SSN  D +V     +++++KNL    T   L + FK F       +K         K   
Sbjct: 649 SSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLS 708

Query: 573 FCYGFIEFEDASSVQSALAASPVTIDD 493
             +GF+EF       + +AA   T+ D
Sbjct: 709 MGFGFVEFRTKEQANAVIAAMDGTVID 735
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>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGF-CYGFIEFEDASSVQSALAA 514
           +Y+KNL       +L+EEF  FG+I    + +   + +GF    F  FE+A+     +  
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363

Query: 513 SPVTIDDRPCHV 478
               +  +P HV
Sbjct: 364 R--VVGSKPLHV 373
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>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 711 PEVDAL-AVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASS 535
           P+++ L ++ + NL    TP+ L   F+R+G I    I    +  Q   +GF+ F +   
Sbjct: 13  PDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 72

Query: 534 VQSAL 520
            + AL
Sbjct: 73  AEHAL 77
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>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1) (Suppressor
           of CDC2 with RNA-binding motif 2)
          Length = 406

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = -2

Query: 729 SSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDG--IQVRSHKIQGFCYGFI 556
           SSN    ++    +Y++ LP H T   L +  + +G I      +   ++K +G  YGF+
Sbjct: 51  SSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG--YGFV 108

Query: 555 EFEDASSVQSALAA 514
           +F+  ++ Q A++A
Sbjct: 109 DFDSPAAAQKAVSA 122
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>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGF-CYGFIEFEDASSVQSALAA 514
           +Y+KNL       +L+EEF  FG+I    + +   + +GF    F  FE+A+     +  
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363

Query: 513 SPVTIDDRPCHV 478
               +  +P HV
Sbjct: 364 R--IVGSKPLHV 373
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>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGF-CYGFIEFEDASSVQSALAA 514
           +Y+KNL       +L+EEF  FG+I    + +   + +GF    F  FE+A+     +  
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363

Query: 513 SPVTIDDRPCHV 478
               +  +P HV
Sbjct: 364 R--IVGSKPLHV 373
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>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGF-CYGFIEFEDASSVQSALAA 514
           +Y+KNL       +L+EEF  FG+I    + +   + +GF    F  FE+A+     +  
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363

Query: 513 SPVTIDDRPCHV 478
               +  +P HV
Sbjct: 364 R--IVGSKPLHV 373
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>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGF-CYGFIEFEDASSVQSALAA 514
           +Y+KNL       +L+EEF  FG+I    + +   + +GF    F  FE+A+     +  
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363

Query: 513 SPVTIDDRPCHV 478
               +  +P HV
Sbjct: 364 R--IVGSKPLHV 373
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>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGF-CYGFIEFEDASSVQSALAA 514
           +Y+KNL       +L+EEF  FG+I    + +   + +GF    F  FE+A+     +  
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363

Query: 513 SPVTIDDRPCHV 478
               +  +P HV
Sbjct: 364 R--IVGSKPLHV 373
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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQV--RSHKIQGFCYGFIEFEDASSVQSALA 517
           V+V NL  +AT   L   F   G I+   +    +S +++GF  G++ F D  S +  + 
Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGF--GYVTFSDIDSAKKCVE 425

Query: 516 ASPVTIDDRPCHVE 475
            +   I  RPC ++
Sbjct: 426 MNGHFIAGRPCRLD 439



 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           +   V+V  L  +     L +EF+ +GTI    + +     +   YG+++FE   + ++A
Sbjct: 261 ETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAA 320

Query: 522 LAAS 511
           +AA+
Sbjct: 321 VAAN 324
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>SYS_PSEPK (Q88FT2) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEE----EFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           E+D + + + NLP  + P    E    E +R+GT K    +++ H   G   G ++FE A
Sbjct: 95  ELDGILLTIPNLPDASVPVGASEDDNVEVRRWGTPKAFDFEIKDHVALGEISGGLDFEAA 154

Query: 540 SSVQSA 523
           + +  A
Sbjct: 155 AKLSGA 160
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>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -2

Query: 711 PEVDALAVYVKNLPLHATPSQLEEEFK--RFGTIKHDGIQVRSHKIQGFCYGFIEFEDAS 538
           P+      ++ NLP   T   ++E F+      ++         +++GF  G+ EFED  
Sbjct: 91  PKSPPYTAFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGF--GYAEFEDLD 148

Query: 537 SVQSALAASPVTIDDRPCHVE 475
           S+ SAL+ +  ++ +R   V+
Sbjct: 149 SLLSALSLNEESLGNRRIRVD 169
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>G3BP_SCHPO (O94260) Putative G3BP-like protein|
          Length = 434

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = -2

Query: 717 QDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDAS 538
           Q  E+   +V+VKN+P   +   L+     FG +K     +   + +G  Y  ++F +  
Sbjct: 308 QSNELLETSVFVKNIPPETSDVSLKSAMSIFGPVK----AIEFARRKGTAY--VDFVNHE 361

Query: 537 SVQSALAASPVTIDDRPCHVEEKR 466
            VQ AL    + I++   ++EE+R
Sbjct: 362 CVQLALNKKTLQINNATLNIEERR 385
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>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein|
           crp79) (Poly(A)-binding protein) (PABP) (Meiotic
           expression up-regulated protein 5)
          Length = 710

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = -2

Query: 696 LAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           L + + NLP   TP  L   FK+ G +K   +     + +GF YG +  +   S Q+A+
Sbjct: 203 LPLSILNLPAEVTPIDLYNHFKQAGVVKGTAVSQFLDQ-RGFRYGEVIMDSVESCQNAI 260
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>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALA 517
           V++  L    T  +L   F+ FGTI +  I V      G C GF+++ D  S ++A+A
Sbjct: 315 VFIGGLSSLVTEDELRAYFQPFGTIVYVKIPV------GKCCGFVQYVDRLSAEAAIA 366
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>UAP2_SCHPO (O43120) Splicing factor U2AF-associated protein 2|
          Length = 367

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTI 616
           E+S      V   AVY++ LPL  T  ++EE FK+ G I
Sbjct: 98  ENSEASPAPVINKAVYIQGLPLDVTVDEIEEVFKKCGVI 136
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>SF1L1_BRARE (Q7SXP4) Splicing factor, arginine/serine-rich 1-like protein 1|
          Length = 245

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAA 514
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+ A
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAVYA 72
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>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 605

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 648 LEEEFKRFGTIKHDGIQVRSHKI-QGFCYGFIEFEDASSVQSA-LAASPVTIDDRPCHVE 475
           LE  F RFG I    + +R  K      Y FIE+ED +S ++A      V IDDR  HV+
Sbjct: 267 LELIFGRFGKILSCEV-IRDQKTGDSLQYAFIEYEDKASCEAAYFKMQGVLIDDRRIHVD 325
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>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1|
          Length = 878

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = -2

Query: 714 DPEVDA---LAVYVKNLPLHATPSQLEEEFKRF-----GTIKHDGIQVRSHKIQGFCYGF 559
           D +V A   +++++KNL    T  QL E+FK F       +K      +  K     +GF
Sbjct: 642 DDDVQAGPTVSIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGF 701

Query: 558 IEFEDASSVQSALAASPVTIDD 493
            EF+      + ++A   TI D
Sbjct: 702 AEFKTKEQANAVISAMEGTILD 723
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>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           V+V N+P   +  Q+ E F + G +K   + +      G  YGF EF D+ +   A+
Sbjct: 9   VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAV 65
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>SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9|
          Length = 221

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       LE+ F ++G I+   ++ R   +    + F+ FED    + A+
Sbjct: 16  IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP---FAFVRFEDPRDAEDAI 69
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>SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pre-mRNA-splicing|
           factor SRp30C)
          Length = 221

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       LE+ F ++G I+   ++ R   +    + F+ FED    + A+
Sbjct: 16  IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP---FAFVRFEDPRDAEDAI 69
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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -2

Query: 729 SSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEF 550
           ++N+Q      + +YV +L  + T   L   F+ FG I +  +   S   +   YGFI F
Sbjct: 252 ANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITF 311

Query: 549 EDASSVQSAL 520
            D+   + AL
Sbjct: 312 SDSECARRAL 321
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>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALAA- 514
           VYV NLP     S+LE+ F   G +    +       +   +GF+     S V  A+AA 
Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210

Query: 513 SPVTIDDRPCHV 478
              T+D R   V
Sbjct: 211 DGQTLDGRAVRV 222
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>SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1|
          Length = 267

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAV 71
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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEF 550
           VYVKNLP   T  +L++ F ++G I    + ++        +GF+ F
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDIS-SAVVMKDQSGNSRSFGFVNF 272



 Score = 30.0 bits (66), Expect = 7.7
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR-SHKIQGFCYGFIEFEDASSVQSAL 520
           V++KNL        L E F  FGTI    + +    + +G  YGF++FE   + Q+A+
Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKG--YGFVQFEKEETAQAAI 189
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>SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1|
          Length = 247

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+
Sbjct: 17  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAV 70
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>SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1|
          Length = 247

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+
Sbjct: 17  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAV 70
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>SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing|
           factor SF2, P33 subunit) (Alternative splicing factor
           ASF-1)
          Length = 247

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+
Sbjct: 17  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAV 70
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>SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1|
          Length = 256

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+
Sbjct: 17  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAV 70
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>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -2

Query: 714 DPEVDALA--VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           DPEV A    ++V+NL    T   LE+ F  FG ++      R  K++   Y F+ FED 
Sbjct: 333 DPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLE------RVKKLKD--YAFVHFEDR 384

Query: 540 SSVQSAL 520
            +   A+
Sbjct: 385 GAAVKAM 391
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>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           VYV NLP      ++E+ F ++G +    ++V         Y F+EF+DA   + A+
Sbjct: 9   VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG---YAFVEFDDARDAEDAI 62
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>SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9|
          Length = 222

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       LE+ F ++G I+   ++ R   +    + F+ FED    + A+
Sbjct: 17  IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVP---FAFVRFEDPRDAEDAI 70
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>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)|
          Length = 600

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           ++V+NLP   T  +L+E+F + G +    I++ + K +G   G + F+   S + A
Sbjct: 525 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKG--CGTVRFDSPESAEKA 578
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>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1|
          Length = 858

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR-SHKIQGFCYGFIEFEDASSVQSALAA 514
           + +KNLP  AT   + + F   G +K   +  +  +  +GF  GF+E+      QSA+ A
Sbjct: 721 ILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTTRGF--GFVEYSTVREAQSAMEA 778



 Score = 30.4 bits (67), Expect = 5.9
 Identities = 16/73 (21%), Positives = 34/73 (46%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           +   + D  +++  ++++NLP  A+  ++   F+ FGT+K   I +           F+ 
Sbjct: 302 KDQKLVDQIMESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVS 361

Query: 552 FEDASSVQSALAA 514
           F D +   +A  A
Sbjct: 362 FSDPAHALAAYRA 374
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>SYS_ACIAD (Q6F8G5) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEE----EFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           E++  A+ + NLP  + P   +E    E  ++GT +    +++ H   G   G +EFE A
Sbjct: 97  EIEQKALSIPNLPDESVPEGKDENDNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETA 156

Query: 540 SSV 532
           + +
Sbjct: 157 TKL 159
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>SFRS1_BRARE (Q6NYA0) Splicing factor, arginine/serine-rich 1|
          Length = 245

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YV NLP       +E+ F ++G I+   ++ R     G  + F+EFED    + A+
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAV 70
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>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYG--F 559
           ES      + +  +V+V+N+P  AT   L   F +FG++K+  + V   K  G   G  F
Sbjct: 278 ESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKY-ALPV-IDKSTGLAKGTAF 335

Query: 558 IEFEDASSVQSALAASP 508
           + F+D  +    +  +P
Sbjct: 336 VAFKDQYTYNECIKNAP 352
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>PTBP2_ARATH (Q9FGL9) Polypyrimidine tract-binding protein homolog 2|
          Length = 429

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFED 544
           ++++NLP   T  +L E  K FGT+ +    V +++ Q     FIEFED
Sbjct: 20  LHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQ----AFIEFED 64
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>SYS_XYLFA (Q9PB58) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEE----EFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           E++ +A+ + NLP    P   +E    E  R+G  +     ++ H   G C+G+++ E A
Sbjct: 96  ELEKVALGIPNLPQQDVPLGADERDNVEQARWGVPRTFDFSIKDHVELGACHGWLDAESA 155

Query: 540 SSVQSA 523
           + +  A
Sbjct: 156 AKLSGA 161
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>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR---SHKIQGFCYGFIEFEDASSVQSAL 520
           +++  L    T   L   ++++G +  D + +R   S + +GF  GF+ F   + V +A+
Sbjct: 11  LFIGGLSFETTEESLRNFYEQWGQLT-DCVVMRDPASKRSRGF--GFVTFSCMNEVDAAM 67

Query: 519 AASPVTIDDRPCHVEEKR 466
           +A P TID R   VE KR
Sbjct: 68  SARPHTIDGRV--VEPKR 83
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>IKBA_PIG (Q08353) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha) (ECI-6)
          Length = 314

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 342 TRPFHSLSLQCNYHGLSCLHLGSCHLY 422
           T+  HS+    NY+G +CLHL S H Y
Sbjct: 169 TQHLHSILQATNYNGHTCLHLASIHGY 195
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>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = -2

Query: 732 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           +   ++   V+   +YV NLP   T SQL E F   GT+ +  +++   ++     GF  
Sbjct: 102 KEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVAN--VEIVYDRVTDRSRGF-A 158

Query: 552 FEDASSVQSALAA 514
           F    SV+ A  A
Sbjct: 159 FVTMGSVEEAKEA 171
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>U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 auxiliary factor|
           59 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF59)
          Length = 517

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGI--QVRSHKIQGFCYGFIEFEDASSVQSALA 517
           +Y+ NLPL+    Q+ E  K FG +    +   +     +GFC  F EF++ S  + A++
Sbjct: 312 IYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFC--FCEFKNPSDAEVAIS 369
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>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           D  +V+V NLP     S LEE F   G+I    I        G  +G++ FE+  +V  A
Sbjct: 283 DKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 342

Query: 522 L 520
           L
Sbjct: 343 L 343
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>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1|
          Length = 833

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -2

Query: 705 VDALAVYVKNLPLHATPSQLEEEFKRF-----GTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           +D   +YVKNL       + ++ FK         I+      R  K     +GF+EF+D 
Sbjct: 616 LDTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDK 675

Query: 540 SSVQSALAA 514
           +S  +A+ A
Sbjct: 676 ASAVAAMHA 684
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>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -2

Query: 711 PEVDALAVYVKNLPLHATPSQLEEEFK--RFGTIKHDGIQVRSHKIQGFCYGFIEFEDAS 538
           P+      ++ NLP   T   +++ F+      ++         +++GF  G+ EFED  
Sbjct: 91  PKSPPYTAFLGNLPYDVTEDSIKDFFRGLNISAVRLPREPSNPDRLKGF--GYAEFEDLD 148

Query: 537 SVQSALAASPVTIDDRPCHVE 475
           S+ SAL+ +  ++ +R   V+
Sbjct: 149 SLLSALSLNEESLGNRRIRVD 169
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>SYS_XYLFT (Q87BX8) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -2

Query: 708 EVDALAVYVKNLPLHATPSQLEE----EFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDA 541
           E++ +A+ + NLP    P   +E    E  R+G  +     ++ H   G C+G+++ E A
Sbjct: 96  ELEKVALDIPNLPQQDVPLGADERDNVEQARWGVPRTFDFAIKDHVELGACHGWLDAESA 155

Query: 540 SSVQSA 523
           + +  A
Sbjct: 156 AKLSGA 161
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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YVKNL       +L +EF  FGTI    + +   + +GF  GF+ F        A+
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGF--GFVCFSSPEEATKAV 350
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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YVKNL       +L +EF  FGTI    + +   + +GF  GF+ F        A+
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGF--GFVCFSSPEEATKAV 350
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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YVKNL       +L +EF  FGTI    + +   + +GF  GF+ F        A+
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGF--GFVCFSSPEEATKAV 350
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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YVKNL       +L +EF  FGTI    + +   + +GF  GF+ F        A+
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGF--GFVCFSSPEEATKAV 350
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>PM14_CAEEL (Q8ITY4) Pre-mRNA branch site p14-like protein|
          Length = 138

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 711 PEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR-SHKIQGFCYGFIEFEDASS 535
           PEV+ + +Y+KNLP   T  ++ E F +FG ++    Q+R  +  +     F+ +ED   
Sbjct: 15  PEVNRI-LYIKNLPYKITTEEMYEIFGKFGAVR----QIRVGNTAETRGTAFVVYEDIFD 69

Query: 534 VQSA 523
            ++A
Sbjct: 70  AKTA 73
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>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVR-SHKIQGFCYGFIEFEDASSVQSALAA 514
           + +KNLP  AT   +++ F  FG++K   +  + + + +GF   F E+  A   + A++A
Sbjct: 705 ILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRGF--AFAEYVSAKEAEHAMSA 762
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>RAVR1_HUMAN (Q8IY67) Protein raver-1|
          Length = 606

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = -2

Query: 723 NIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEF-- 550
           ++Q    DAL + V NLP   T  Q EE  + FG+++   +       Q   YGF E+  
Sbjct: 124 SVQLQPTDAL-LCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMK 182

Query: 549 -EDASSVQSALAASPV 505
            + A+  +S L   P+
Sbjct: 183 KDSAARAKSDLLGKPL 198
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>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3|
          Length = 388

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = -2

Query: 711 PEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSV 532
           P       +V NL    T + L + F    T     I   + + +GF  G++EFE A ++
Sbjct: 89  PSEPPFTAHVGNLSFDLTENDLGDFFGEGVTSIRLVIDPLTERSRGF--GYVEFETADTL 146

Query: 531 QSALAASPVTIDDRPCHV 478
            +ALA S   +  RP  +
Sbjct: 147 SAALALSGEDLMGRPVRI 164
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>WHI3_YEAST (P34761) Protein WHI3|
          Length = 661

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = -2

Query: 717 QDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYG---FIEFE 547
           Q+P  + L  YV NLP  AT  +L + F      +    + ++    G  +G   F+EF+
Sbjct: 533 QNPPCNTL--YVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFD 590

Query: 546 DASSVQSALA 517
           D S    ALA
Sbjct: 591 DVSFATRALA 600
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>YHC3_YEAST (P38742) Hypothetical 130.0 kDa protein in SNF6-SPO11 intergenic|
           region
          Length = 1146

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
 Frame = +3

Query: 111 SQEPSSRHTFFVNLSTFNDNEIANFYQRIATELTLRLPGHHHDHRWQS---DRPAGSQHH 281
           SQ     +    N S   D         I+++ +L   G H+     S   D P  S HH
Sbjct: 279 SQSTKKGNKLLKNTSNETDGNAFTGSCSISSKKSLSSTGEHNQELRNSSLNDTPGQSPHH 338

Query: 282 LHDLTHLYHRLCLHTQIDSCTR 347
            H   H YH+    +Q +S T+
Sbjct: 339 YHHRYHHYHKNAATSQRNSHTQ 360
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>PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase|
           (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT)
           (Lysophosphatidic acid acyltransferase) (LPAAT)
          Length = 303

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 372 CNYHG----LSCLHLGSCHLYPVETFPCYYHVNQEFFFLQHGMVGHQSSQEKPRVHFELS 539
           C ++G    + C  +G  HL    T  C+YHV +    L   +VG ++  +KP  +  ++
Sbjct: 23  CGFYGVIASILCTLIGKQHLAQWITARCFYHVMKLMLGLDVKVVGEENLAKKP--YIMIA 80

Query: 540 WHPQTL 557
            H  TL
Sbjct: 81  NHQSTL 86
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>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           ++V NLP +    ++ E FKR+G ++   I +     +G    F++F D  S Q A
Sbjct: 8   LWVGNLPENVREEKIIEHFKRYGRVESVKI-LPKRGSEGGVAAFVDFVDIKSAQKA 62
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>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           VYVKNL    T   L+  F  +G I    + ++  + +   +GF+ FE+A     A+
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKIT-SAVVMKDGEGKSKGFGFVNFENADDAARAV 272
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>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           ++V NLP +    ++ E FKR+G ++   I +     +G    F++F D  S Q A
Sbjct: 8   LWVGNLPENVREEKIIEHFKRYGRVESVKI-LPKRGSEGGVAAFVDFVDIKSAQKA 62
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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = -2

Query: 720 IQDPEVDALA----VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           I+DP+ + +A    ++V+NL    T   LE+ F +FG ++      R  K++   Y FI 
Sbjct: 236 IEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLE------RVKKLKD--YAFIH 287

Query: 552 FEDASSVQSAL 520
           F++      A+
Sbjct: 288 FDERDGAVKAM 298
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>LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain protein 6)|
          Length = 624

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 228 HHHDHRWQSDRPAGSQHHLHDL-THLYHRLCLHTQIDS 338
           HHH  R Q  R  GS HH H    H +HR  L +  DS
Sbjct: 514 HHHRRRRQRHRRRGSHHHHHHPGRHGHHRCDLGSGSDS 551
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>SYS_BACHD (Q9KGN4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -2

Query: 714 DPEVDALAVYVKNLPLHATPSQLEE----EFKRFGTIKHDGIQVRSHKIQGFCYGFIEFE 547
           D E+D L + + N+P  +TP    E    E +++G + +   + ++H       G ++FE
Sbjct: 94  DEELDQLLLAIPNVPHESTPVGETEDDNVEVRKWGEVPNFPFEPKAHWDLATALGIVDFE 153

Query: 546 DASSV 532
            A+ V
Sbjct: 154 RAAKV 158
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>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3|
           (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa)
           (Tip110)
          Length = 963

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQV-RSHKIQGFCYGFIEFEDASSVQSAL 520
           +++  LP   T  +LEE  K  GT+K   +   R+ K +G  Y  +E+E+ S    A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAY--VEYENESQASQAV 858
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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = -2

Query: 720 IQDPEVDALA----VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           I+DP+ + +A    ++V+NL    T   LE+ F +FG ++      R  K++   Y FI 
Sbjct: 326 IEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLE------RVKKLKD--YAFIH 377

Query: 552 FEDASSVQSAL 520
           F++      A+
Sbjct: 378 FDERDGAVKAM 388
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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSAL 520
           +YVKNL       +L +EF  FGTI    + +   + +GF  GF+ F        A+
Sbjct: 296 LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGRSKGF--GFVCFSSPEEATKAV 350
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>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2|
           (G-strand-binding protein 2) (RAP1 localization factor
           6)
          Length = 427

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -2

Query: 693 AVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSALA 517
           +++V+NL    TP  L+E F   G +    I       +G   G +EF    SVQ A++
Sbjct: 123 SIFVRNLTFDCTPEDLKELFGTVGEVVEADIITSKGHHRGM--GTVEFTKNESVQDAIS 179
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>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3|
           (SART-3)
          Length = 981

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 690 VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQV-RSHKIQGFCYGFIEFEDASSVQSAL 520
           +++  LP   T  +LEE  K  GT+K   +   R+ K +G  Y  +E+E+ S    A+
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAY--VEYENESQASQAV 876
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>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -2

Query: 702 DALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIEFEDASSVQSA 523
           D  +V+V NLP     S LEE F   G+I    I        G  +G++ FE+  +V  A
Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 348

Query: 522 L 520
           L
Sbjct: 349 L 349
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>IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha) (RL/IF-1)
          Length = 314

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 336 SCT-RPFHSLSLQCNYHGLSCLHLGSCHLY 422
           +CT +  HS+    NY+G +CLHL S H Y
Sbjct: 166 TCTPQHLHSVLQATNYNGHTCLHLASIHGY 195
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>IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha)
          Length = 314

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 336 SCT-RPFHSLSLQCNYHGLSCLHLGSCHLY 422
           +CT +  HS+    NY+G +CLHL S H Y
Sbjct: 166 TCTPQHLHSVLQATNYNGHTCLHLASIHGY 195
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>TRA2_DROVI (O02008) Transformer-2 sex-determining protein|
          Length = 272

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = -2

Query: 684 VKNLPLHATPSQLEEEFKRFGTIKHDG--IQVRSHKIQGFCYGFIEFEDASSVQSAL-AA 514
           V  L  + T  ++ E F +FG I+     I   +H+ +GFC  FI FE+    + A  A 
Sbjct: 109 VFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFC--FIYFENLGDARVAKDAC 166

Query: 513 SPVTIDDRPCHVE 475
           + + +D R   V+
Sbjct: 167 TGMEVDGRRIRVD 179
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>POXM_DROME (P23757) Paired box pox-meso protein (Paired box mesodermal|
           protein)
          Length = 402

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 222 PGHHHDHRWQSDRPAGSQHHLHDLTHLYHRL 314
           P HHH H  QS   A S HH+H   H +  L
Sbjct: 223 PHHHHHH--QSAAAAASAHHVHAHAHAHAHL 251
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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = -2

Query: 720 IQDPEVDALA----VYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 553
           I+DP+ + +A    ++V+NL    T   LE+ F +FG ++      R  K++   Y FI 
Sbjct: 326 IEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLE------RVKKLKD--YAFIH 377

Query: 552 FEDASSVQSAL 520
           F++      A+
Sbjct: 378 FDERDGAVKAM 388


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,964,808
Number of Sequences: 219361
Number of extensions: 1782293
Number of successful extensions: 5410
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 4962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5328
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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