ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11o19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472172.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1461 Score = 325 bits (164), Expect = 1e-85 Identities = 308/356 (86%) Strand = Plus / Minus Query: 248 gcagagtgatcgacccgctggtagccaacatcacctccacgacctgacccacctctacca 307 |||||||| || ||||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 1412 gcagagtggtcaacccgctggtagccaacatcaccaccacgtgatgaaccacctctacca 1353 Query: 308 ccgcctctgcctccatactcagatcgatagttgtactcgccccttccatagcctctccct 367 |||||||||||||||| || |||||||| ||| |||| |||||||||||||| |||||| Sbjct: 1352 gcgcctctgcctccatagtcggatcgataattgaactcaccccttccatagcccctccct 1293 Query: 368 ccagtgtaactaccacggcctctcatgccttcacctcggaagctgccacctctacccggt 427 || |||||| | || ||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 1292 ccggtgtaattcccgcggcctctcatgccttcacctcggaagttaccacctctaccagga 1233 Query: 428 ggaaaccttcccctgctactaccacgtgaaccaggagttcttttttcttcaacatggcat 487 | ||||||||| |||| || |||||||||||||| |||||| ||||| || |||| ||| Sbjct: 1232 gcaaaccttcctctgccaccaccacgtgaaccagcagttctcttttcctccacataacat 1173 Query: 488 ggtcggtcatcaatcgtcacaggagaagccgcgagtgcactttgaactgagctggcatcc 547 | |||||| |||||||||||||||| |||| | ||||||||||||||| |||| ||| Sbjct: 1172 tgccggtcactaatcgtcacaggagaacccgcaattgcactttgaactgaactgggatct 1113 Query: 548 tcaaactctatgaagccgtaacagaacccttgaatcttgtggcttctaacttggat 603 |||||||||| || || || |||||||||||||||||||| |||||||||||||| Sbjct: 1112 tcaaactctacaaacccatagcagaacccttgaatcttgtgacttctaacttggat 1057
>dbj|AK101615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052F07, full insert sequence Length = 1900 Score = 325 bits (164), Expect = 1e-85 Identities = 308/356 (86%) Strand = Plus / Minus Query: 248 gcagagtgatcgacccgctggtagccaacatcacctccacgacctgacccacctctacca 307 |||||||| || ||||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 1495 gcagagtggtcaacccgctggtagccaacatcaccaccacgtgatgaaccacctctacca 1436 Query: 308 ccgcctctgcctccatactcagatcgatagttgtactcgccccttccatagcctctccct 367 |||||||||||||||| || |||||||| ||| |||| |||||||||||||| |||||| Sbjct: 1435 gcgcctctgcctccatagtcggatcgataattgaactcaccccttccatagcccctccct 1376 Query: 368 ccagtgtaactaccacggcctctcatgccttcacctcggaagctgccacctctacccggt 427 || |||||| | || ||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 1375 ccggtgtaattcccgcggcctctcatgccttcacctcggaagttaccacctctaccagga 1316 Query: 428 ggaaaccttcccctgctactaccacgtgaaccaggagttcttttttcttcaacatggcat 487 | ||||||||| |||| || |||||||||||||| |||||| ||||| || |||| ||| Sbjct: 1315 gcaaaccttcctctgccaccaccacgtgaaccagcagttctcttttcctccacataacat 1256 Query: 488 ggtcggtcatcaatcgtcacaggagaagccgcgagtgcactttgaactgagctggcatcc 547 | |||||| |||||||||||||||| |||| | ||||||||||||||| |||| ||| Sbjct: 1255 tgccggtcactaatcgtcacaggagaacccgcaattgcactttgaactgaactgggatct 1196 Query: 548 tcaaactctatgaagccgtaacagaacccttgaatcttgtggcttctaacttggat 603 |||||||||| || || || |||||||||||||||||||| |||||||||||||| Sbjct: 1195 tcaaactctacaaacccatagcagaacccttgaatcttgtgacttctaacttggat 1140
>gb|AY105504.1| Zea mays PCO105214 mRNA sequence Length = 1000 Score = 210 bits (106), Expect = 5e-51 Identities = 335/410 (81%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 316 gcctccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgta 375 ||||||||| || ||||| || || ||||||||||||| || ||||| |||||| |||| Sbjct: 917 gcctccataatcggatcggtaactgaactcgccccttccgtaccctctgcctccattgta 858 Query: 376 actaccacggcctctcatgccttcacctcggaagctgccacctctacccggtggaaacct 435 ||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 857 tgtaccacggcctctaatgccttcacctcggaaattaccacctctacctggtggaaacct 798 Query: 436 tcc---cctgctactacc---acgtgaaccaggagttcttttttcttcaacatggcatgg 489 ||| |||||||| ||| ||| ||||||| ||| ||||| ||||| ||| |||| | Sbjct: 797 tcctcccctgctaccaccgccacgagaaccagtagtccttttctcttcgacaaagcattg 738 Query: 490 tcggtcatcaatcgtcacaggagaagccgcgagtgcactttgaactgagctggcatcctc 549 || ||| |||| || |||||||||||| | | |||| |||||||| ||||||||||| Sbjct: 737 ccgctcaccaatagtaacaggagaagcctctattgcagcttgaactgcactggcatcctc 678 Query: 550 aaactctatgaagccgtaacagaacccttgaatcttgtggcttctaacttggataccatc 609 ||| |||| ||||| || || |||||||| ||||||| ||||||||||||||| || || Sbjct: 677 aaattctacaaagccatagcaaaacccttggatcttgttgcttctaacttggatgccttc 618 Query: 610 atgtttaatagtaccaaatcttttgaactcctcttctaattggcttggtgtggcatgtag 669 ||||||||| || |||||||| |||||||| || |||||||| ||||||||||| || Sbjct: 617 atgtttaatggttccaaatctcttgaactcttcctctaattgttgtggtgtggcatttaa 558 Query: 670 gggcagattttttacatacaccgcaagcgcatcaacttctgggtcttgaa 719 |||||| || ||||| | ||| | |||||||||||||| ||||||| Sbjct: 557 tggcagacttcgcacatatatggcatgtgcatcaacttctggatcttgaa 508
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 198 bits (100), Expect = 2e-47 Identities = 172/196 (87%) Strand = Plus / Plus Query: 248 gcagagtgatcgacccgctggtagccaacatcacctccacgacctgacccacctctacca 307 |||||||| || ||||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 18182730 gcagagtggtcaacccgctggtagccaacatcaccaccacgtgatgaaccacctctacca 18182789 Query: 308 ccgcctctgcctccatactcagatcgatagttgtactcgccccttccatagcctctccct 367 |||||||||||||||| || |||||||| ||| |||| |||||||||||||| |||||| Sbjct: 18182790 gcgcctctgcctccatagtcggatcgataattgaactcaccccttccatagcccctccct 18182849 Query: 368 ccagtgtaactaccacggcctctcatgccttcacctcggaagctgccacctctacccggt 427 || |||||| | || ||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 18182850 ccggtgtaattcccgcggcctctcatgccttcacctcggaagttaccacctctaccagga 18182909 Query: 428 ggaaaccttcccctgc 443 | ||||||||| |||| Sbjct: 18182910 gcaaaccttcctctgc 18182925 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 523 tgcactttgaactgagctggcatcctcaaactctatgaagccgtaacagaacccttgaat 582 ||||||||||||||| |||| ||| |||||||||| || || || |||||||||||||| Sbjct: 18184905 tgcactttgaactgaactgggatcttcaaactctacaaacccatagcagaacccttgaat 18184964 Query: 583 ct 584 || Sbjct: 18184965 ct 18184966 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 447 taccacgtgaaccaggagttcttttttcttcaacatggcatggtcggtcatcaatcgtca 506 ||||||||||||||| |||||| ||||| || |||| ||| | |||||| |||||||| Sbjct: 18183394 taccacgtgaaccagcagttctcttttcctccacataacattgccggtcactaatcgtca 18183453 Query: 507 caggagaa 514 |||||||| Sbjct: 18183454 caggagaa 18183461
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 198 bits (100), Expect = 2e-47 Identities = 172/196 (87%) Strand = Plus / Plus Query: 248 gcagagtgatcgacccgctggtagccaacatcacctccacgacctgacccacctctacca 307 |||||||| || ||||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 18404 gcagagtggtcaacccgctggtagccaacatcaccaccacgtgatgaaccacctctacca 18463 Query: 308 ccgcctctgcctccatactcagatcgatagttgtactcgccccttccatagcctctccct 367 |||||||||||||||| || |||||||| ||| |||| |||||||||||||| |||||| Sbjct: 18464 gcgcctctgcctccatagtcggatcgataattgaactcaccccttccatagcccctccct 18523 Query: 368 ccagtgtaactaccacggcctctcatgccttcacctcggaagctgccacctctacccggt 427 || |||||| | || ||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 18524 ccggtgtaattcccgcggcctctcatgccttcacctcggaagttaccacctctaccagga 18583 Query: 428 ggaaaccttcccctgc 443 | ||||||||| |||| Sbjct: 18584 gcaaaccttcctctgc 18599 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 523 tgcactttgaactgagctggcatcctcaaactctatgaagccgtaacagaacccttgaat 582 ||||||||||||||| |||| ||| |||||||||| || || || |||||||||||||| Sbjct: 20579 tgcactttgaactgaactgggatcttcaaactctacaaacccatagcagaacccttgaat 20638 Query: 583 ct 584 || Sbjct: 20639 ct 20640 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 447 taccacgtgaaccaggagttcttttttcttcaacatggcatggtcggtcatcaatcgtca 506 ||||||||||||||| |||||| ||||| || |||| ||| | |||||| |||||||| Sbjct: 19068 taccacgtgaaccagcagttctcttttcctccacataacattgccggtcactaatcgtca 19127 Query: 507 caggagaa 514 |||||||| Sbjct: 19128 caggagaa 19135
>ref|XM_465810.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2040 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 560 aagccgtaacagaacccttgaatcttgtggcttctaacttggataccatcatgttt 615 ||||| |||||||||||||||||||| |||||||| ||||| || |||||| |||| Sbjct: 1215 aagccataacagaacccttgaatcttatggcttctgacttgaatcccatcaggttt 1160 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Minus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccaccgcctctgcct 319 |||| |||||||||||||||| |||||| | || |||||||| ||||| |||||||| Sbjct: 1521 accctctggtagccaacatcaggtccacgcgcagagccacctctgccaccacctctgcca 1462 Query: 320 ccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgtaacta 379 ||||| ||||||| || || | || |||||||| |||| || |||||| | ||| | Sbjct: 1461 ccataatcagatctgtaactgaaatcaccccttccgtagctccttcctccactataattg 1402 Query: 380 ccacggcctctcat 393 |||||||||||||| Sbjct: 1401 ccacggcctctcat 1388
>dbj|AK104815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H07, full insert sequence Length = 1037 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 560 aagccgtaacagaacccttgaatcttgtggcttctaacttggataccatcatgttt 615 ||||| |||||||||||||||||||| |||||||| ||||| || |||||| |||| Sbjct: 168 aagccataacagaacccttgaatcttatggcttctgacttgaatcccatcaggttt 113 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Minus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccaccgcctctgcct 319 |||| |||||||||||||||| |||||| | || |||||||| ||||| |||||||| Sbjct: 474 accctctggtagccaacatcaggtccacgcgcagagccacctctgccaccacctctgcca 415 Query: 320 ccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgtaacta 379 ||||| ||||||| || || | || |||||||| |||| || |||||| | ||| | Sbjct: 414 ccataatcagatctgtaactgaaatcaccccttccgtagctccttcctccactataattg 355 Query: 380 ccacggcctctcat 393 |||||||||||||| Sbjct: 354 ccacggcctctcat 341
>dbj|AK070143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O14, full insert sequence Length = 2040 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 560 aagccgtaacagaacccttgaatcttgtggcttctaacttggataccatcatgttt 615 ||||| |||||||||||||||||||| |||||||| ||||| || |||||| |||| Sbjct: 1215 aagccataacagaacccttgaatcttatggcttctgacttgaatcccatcaggttt 1160 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Minus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccaccgcctctgcct 319 |||| |||||||||||||||| |||||| | || |||||||| ||||| |||||||| Sbjct: 1521 accctctggtagccaacatcaggtccacgcgcagagccacctctgccaccacctctgcca 1462 Query: 320 ccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgtaacta 379 ||||| ||||||| || || | || |||||||| |||| || |||||| | ||| | Sbjct: 1461 ccataatcagatctgtaactgaaatcaccccttccgtagctccttcctccactataattg 1402 Query: 380 ccacggcctctcat 393 |||||||||||||| Sbjct: 1401 ccacggcctctcat 1388
>dbj|AK066155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055D11, full insert sequence Length = 2118 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 560 aagccgtaacagaacccttgaatcttgtggcttctaacttggataccatcatgttt 615 ||||| |||||||||||||||||||| |||||||| ||||| || |||||| |||| Sbjct: 1257 aagccataacagaacccttgaatcttatggcttctgacttgaatcccatcaggttt 1202 Score = 52.0 bits (26), Expect = 0.003 Identities = 107/134 (79%) Strand = Plus / Minus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccaccgcctctgcct 319 |||| |||||||||||||||| |||||| | || ||||||| ||||| |||||||| Sbjct: 1563 accctctggtagccaacatcaggtccacgcgcagagtcacctctgccaccacctctgcca 1504 Query: 320 ccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgtaacta 379 ||||| ||||||| || || | || |||||||| |||| || |||||| | ||| | Sbjct: 1503 ccataatcagatctgtaactgaaatcaccccttccgtagctccttcctccactataattg 1444 Query: 380 ccacggcctctcat 393 |||||||||||||| Sbjct: 1443 ccacggcctctcat 1430
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Plus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccaccgcctctgcct 319 |||| |||||||||||||||| |||||| | || |||||||| ||||| |||||||| Sbjct: 17610660 accctctggtagccaacatcaggtccacgcgcagagccacctctgccaccacctctgcca 17610719 Query: 320 ccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgtaacta 379 ||||| ||||||| || || | || |||||||| |||| || |||||| | ||| | Sbjct: 17610720 ccataatcagatctgtaactgaaatcaccccttccgtagctccttcctccactataattg 17610779 Query: 380 ccacggcctctcat 393 |||||||||||||| Sbjct: 17610780 ccacggcctctcat 17610793 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 aagccgtaacagaacccttgaatct 584 ||||| ||||||||||||||||||| Sbjct: 17612919 aagccataacagaacccttgaatct 17612943
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Plus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccaccgcctctgcct 319 |||| |||||||||||||||| |||||| | || |||||||| ||||| |||||||| Sbjct: 80578 accctctggtagccaacatcaggtccacgcgcagagccacctctgccaccacctctgcca 80637 Query: 320 ccatactcagatcgatagttgtactcgccccttccatagcctctccctccagtgtaacta 379 ||||| ||||||| || || | || |||||||| |||| || |||||| | ||| | Sbjct: 80638 ccataatcagatctgtaactgaaatcaccccttccgtagctccttcctccactataattg 80697 Query: 380 ccacggcctctcat 393 |||||||||||||| Sbjct: 80698 ccacggcctctcat 80711 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 aagccgtaacagaacccttgaatct 584 ||||| ||||||||||||||||||| Sbjct: 82837 aagccataacagaacccttgaatct 82861
>emb|BX936365.3| Human DNA sequence from clone WI2-81657B9 on chromosome X Contains the 3' end of the GDI1 gene for GDP dissociation inhibitor 1, the FAM50A gene for family with sequence similarity 50, member A, a novel gene (DXS9879E) gene , the PLXNA3 gene for plexin A3 and a CpG island, complete sequence Length = 39835 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 catgccttcacctcggaagctg 412 |||||||||||||||||||||| Sbjct: 23523 catgccttcacctcggaagctg 23502
>gb|AC182642.2| Pan troglodytes BAC clone CH251-216C21 from chromosome 21, complete sequence Length = 187371 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 605 ccatcatgtttaatagtaccaa 626 |||||||||||||||||||||| Sbjct: 59299 ccatcatgtttaatagtaccaa 59320
>gb|AY111229.1| Zea mays CL23810_1 mRNA sequence Length = 788 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 260 acccgctggtagccaacatcacctccacgacctgacccacctctaccacc 309 |||| |||||||||||||||| ||||||| ||| |||||||| ||||| Sbjct: 516 accctctggtagccaacatcagctccacgtaatgagccacctctgccacc 565
>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to glucose-6-phosphate dehydrogenase (G6PD) gene, complete cds's Length = 219447 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 catgccttcacctcggaagctg 412 |||||||||||||||||||||| Sbjct: 135960 catgccttcacctcggaagctg 135939
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 ccacctctaccaccgcctctg 316 ||||||||||||||||||||| Sbjct: 468061 ccacctctaccaccgcctctg 468041
>ref|XM_842972.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0368) partial mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 ccacctctaccaccgcctctg 316 ||||||||||||||||||||| Sbjct: 1874 ccacctctaccaccgcctctg 1894
>gb|AC118560.2| Homo sapiens chromosome 1 clone RP5-885N11, complete sequence Length = 20269 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agattgtaatattctacaatt 32 ||||||||||||||||||||| Sbjct: 11278 agattgtaatattctacaatt 11298
>dbj|AB236858.1| Trifolium pratense RNA for putative ras-GTPase-activating protein SH3-domain binding protein, complete cds, clone: C764 Length = 1664 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 cttctaacttggataccatcatgtttaat 618 ||||||||||| ||||||||| ||||||| Sbjct: 1043 cttctaacttgaataccatcacgtttaat 1015
>dbj|AB236770.1| Trifolium pratense RNA for putative ras-GTPase-activating protein SH3-domain binding protein, complete cds, clone: C1578 Length = 1659 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 cttctaacttggataccatcatgtttaat 618 ||||||||||| ||||||||| ||||||| Sbjct: 1039 cttctaacttgaataccatcacgtttaat 1011
>gb|U46668.1| Caenorhabditis elegans cosmid F38E9, complete sequence Length = 40906 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 gctcacgacacaccttttttg 144 ||||||||||||||||||||| Sbjct: 34125 gctcacgacacaccttttttg 34145 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,951,359 Number of Sequences: 3902068 Number of extensions: 6951359 Number of successful extensions: 127733 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127602 Number of HSP's gapped (non-prelim): 124 length of query: 733 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 710 effective length of database: 17,143,297,704 effective search space: 12171741369840 effective search space used: 12171741369840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
