ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal12d17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450284.1| Oryza sativa (japonica cultivar-group), mRNA 363 5e-97
2dbj|AK120335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
4dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
8ref|NM_180205.1| Arabidopsis thaliana unknown protein AT3G07700 ... 42 2.4
9ref|NM_111649.2| Arabidopsis thaliana unknown protein AT3G07700 ... 42 2.4
10gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
11gb|AY080823.1| Arabidopsis thaliana unknown protein (At3g07700) ... 42 2.4
12emb|CR385046.9| Zebrafish DNA sequence from clone CH211-217P23 i... 42 2.4
13gb|AC022536.13| Homo sapiens chromosome 10 clone RP11-38M7, comp... 42 2.4
14emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in... 42 2.4
15gb|AY056806.1| Arabidopsis thaliana At3g07700/F17A17.4 mRNA, com... 42 2.4
16gb|AF119906.1|AF119906 Homo sapiens PRO2859 mRNA, complete cds 42 2.4
17emb|BX825965.1|CNS0A6HO Arabidopsis thaliana Full-length cDNA Co... 42 2.4
18emb|BX825129.1|CNS0A66K Arabidopsis thaliana Full-length cDNA Co... 42 2.4
19gb|AY088788.1| Arabidopsis thaliana clone 95043 mRNA, complete s... 42 2.4
20dbj|AK120763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
21gb|AC174769.1| Gasterosteus aculeatus clone VMRC28-49K14, comple... 42 2.4
22gb|AC132871.7| Mus musculus chromosome 1, clone RP24-387A12, com... 40 9.4
23emb|AL357140.33| Human DNA sequence from clone RP11-84A14 on chr... 40 9.4
24emb|AL110115.38|HSJ324O17 Human DNA sequence from clone RP3-324O... 40 9.4
25gb|AC118584.18| Papio anubis clone rp41-78d16, complete sequence 40 9.4
26emb|CR386340.1| Gallus gallus finished cDNA, clone ChEST731g19 40 9.4
27gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex B... 40 9.4
28gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, comple... 40 9.4
29dbj|AK174212.1| Ciona intestinalis cDNA, clone:cibd071i22, full ... 40 9.4
30emb|BX470160.9| Zebrafish DNA sequence from clone DKEY-25F3 in l... 40 9.4
31emb|BX000480.6| Zebrafish DNA sequence from clone DKEY-14C5 in l... 40 9.4 
>ref|XM_450284.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2579

 Score =  363 bits (183), Expect = 5e-97
 Identities = 375/439 (85%)
 Strand = Plus / Minus

                                                                        
Query: 230  atcatcgtctcgaatttctcgagtttcttcactcttcgcatcgatgcaaccagtaatgcc 289
            ||||| ||||||||||| |||||||||||||||||  |||| |||   |  || ||||||
Sbjct: 2185 atcattgtctcgaatttgtcgagtttcttcactctctgcatagatcttatgagcaatgcc 2126

                                                                        
Query: 290  aataaaatgcctgcgccgacgaaagacccatttgcgactatttggtttccttgactagcc 349
            || || ||||||||||| || |||||||| ||||| ||||||||||| ||||| |||  |
Sbjct: 2125 aagaatatgcctgcgccaacaaaagacccgtttgccactatttggttcccttggctactc 2066

                                                                        
Query: 350  atgacgaccccaatattcaagagagtaccacccatggctgtatacatggtcgccatctga 409
            |    ||||||||  ||||| || || ||||| ||||||||||||||||||||||| |||
Sbjct: 2065 aatgtgaccccaacgttcaacagcgtgccaccaatggctgtatacatggtcgccatttga 2006

                                                                        
Query: 410  agtacgttagctttacgagcagctcgttccgactcaagtactctgactctgagtttcagg 469
            ||||| || || ||||||||||||| ||| |||||||||||||||||||| |||||||| 
Sbjct: 2005 agtacattcgccttacgagcagctctttcagactcaagtactctgactctaagtttcaga 1946

                                                                        
Query: 470  tcacccgactcgagttgccccacaaaatcctcgatccgttggattctgtagggcattgag 529
            ||||| ||||| |||||||| ||||||||||| || || || ||||||||||||||||||
Sbjct: 1945 tcaccggactcaagttgcccaacaaaatcctcaattcgctgtattctgtagggcattgag 1886

                                                                        
Query: 530  atcgtagaatcacgggcatcatttgcttgctttcttatctcctggactagttcaggtcca 589
            || ||||| ||||| |||   ||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1885 atggtagagtcacgagcactgtttgcttgctttcttatctcccggactagttcaggtgca 1826

                                                                        
Query: 590  gctcttcgtctcgttttcaagtctagcagttcctgtgcatatggtgcagcaactttgaca 649
              | ||||||||  |||||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 1825 cttgttcgtctctgtttcaagtctagaagttcctgtgcataaggtgcggcaactttcaca 1766

                               
Query: 650  aaggaaaaatcaggatcca 668
            ||||||||||| |||||||
Sbjct: 1765 aaggaaaaatctggatcca 1747
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>dbj|AK120335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059I22, full
            insert sequence
          Length = 2579

 Score =  355 bits (179), Expect = 1e-94
 Identities = 374/439 (85%)
 Strand = Plus / Minus

                                                                        
Query: 230  atcatcgtctcgaatttctcgagtttcttcactcttcgcatcgatgcaaccagtaatgcc 289
            ||||| ||||||||||| |||||||||||||||||  |||| |||   |  || ||||||
Sbjct: 2185 atcattgtctcgaatttgtcgagtttcttcactctctgcatagatcttatgagcaatgcc 2126

                                                                        
Query: 290  aataaaatgcctgcgccgacgaaagacccatttgcgactatttggtttccttgactagcc 349
            || || ||||||||||| || |||||||| ||||| ||||||||||| ||||| |||  |
Sbjct: 2125 aagaatatgcctgcgccaacaaaagacccgtttgccactatttggttcccttggctactc 2066

                                                                        
Query: 350  atgacgaccccaatattcaagagagtaccacccatggctgtatacatggtcgccatctga 409
            |    ||||||||  ||||| || || ||||| ||||||||||||||||||||||| |||
Sbjct: 2065 aatgtgaccccaacgttcaacagcgtgccaccaatggctgtatacatggtcgccatttga 2006

                                                                        
Query: 410  agtacgttagctttacgagcagctcgttccgactcaagtactctgactctgagtttcagg 469
            ||||| || || |||| |||||||| ||| |||||||||||||||||||| |||||||| 
Sbjct: 2005 agtacattcgccttactagcagctctttcagactcaagtactctgactctaagtttcaga 1946

                                                                        
Query: 470  tcacccgactcgagttgccccacaaaatcctcgatccgttggattctgtagggcattgag 529
            ||||| ||||| |||||||| ||||||||||| || || || ||||||||||||||||||
Sbjct: 1945 tcaccggactcaagttgcccaacaaaatcctcaattcgctgtattctgtagggcattgag 1886

                                                                        
Query: 530  atcgtagaatcacgggcatcatttgcttgctttcttatctcctggactagttcaggtcca 589
            || ||||| ||||| |||   ||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1885 atggtagagtcacgagcactgtttgcttgctttcttatctcccggactagttcaggtgca 1826

                                                                        
Query: 590  gctcttcgtctcgttttcaagtctagcagttcctgtgcatatggtgcagcaactttgaca 649
              | ||||||||  |||||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 1825 cttgttcgtctctgtttcaagtctagaagttcctgtgcataaggtgcggcaactttcaca 1766

                               
Query: 650  aaggaaaaatcaggatcca 668
            ||||||||||| |||||||
Sbjct: 1765 aaggaaaaatctggatcca 1747
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                           
Query: 442     ctcaagtactctgactctgagtttcaggtcacccgactcgagttgccccacaaaatcctc 501
               |||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 3807556 ctcaagtactctgactctaagtttcagatcaccggactcaagttgcccaacaaaatcctc 3807497

                                                         
Query: 502     gatccgttggattctgtagggcattgagatcgtagaatcacg 543
                || || || |||||||||||||||||||| ||||| |||||
Sbjct: 3807496 aattcgctgtattctgtagggcattgagatggtagagtcacg 3807455



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                           
Query: 299     cctgcgccgacgaaagacccatttgcgactatttggtttccttgactagccatgacgacc 358
               |||||||| || |||||||| ||||| ||||||||||| ||||| |||  ||    ||||
Sbjct: 3808066 cctgcgccaacaaaagacccgtttgccactatttggttcccttggctactcaatgtgacc 3808007

                                                                           
Query: 359     ccaatattcaagagagtaccacccatggctgtatacatggtcgccatctgaagtacgtta 418
               ||||  ||||| || || ||||| ||||||||||||||||||||||| |||||||| || 
Sbjct: 3808006 ccaacgttcaacagcgtgccaccaatggctgtatacatggtcgccatttgaagtacattc 3807947

                                        
Query: 419     gctttacgagcagctcgttccgact 443
               || ||||||||||||| ||| ||||
Sbjct: 3807946 gccttacgagcagctctttcagact 3807922



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                           
Query: 551     tttgcttgctttcttatctcctggactagttcaggtccagctcttcgtctcgttttcaag 610
               ||||||||||||||||||||| |||||||||||||| ||  | ||||||||  |||||||
Sbjct: 3807329 tttgcttgctttcttatctcccggactagttcaggtgcacttgttcgtctctgtttcaag 3807270

                             
Query: 611     tctagcagttcctg 624
               ||||| ||||||||
Sbjct: 3807269 tctagaagttcctg 3807256



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 621     cctgtgcatatggtgcagcaactttgacaaaggaaaaatcaggatcca 668
               |||||||||| ||||| |||||||| |||||||||||||| |||||||
Sbjct: 3807008 cctgtgcataaggtgcggcaactttcacaaaggaaaaatctggatcca 3806961



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 230     atcatcgtctcgaatttctcgagtttcttcactct 264
               ||||| ||||||||||| |||||||||||||||||
Sbjct: 3808381 atcattgtctcgaatttgtcgagtttcttcactct 3808347
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>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1080A02
          Length = 151360

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                         
Query: 442   ctcaagtactctgactctgagtttcaggtcacccgactcgagttgccccacaaaatcctc 501
             |||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 47072 ctcaagtactctgactctaagtttcagatcaccggactcaagttgcccaacaaaatcctc 47013

                                                       
Query: 502   gatccgttggattctgtagggcattgagatcgtagaatcacg 543
              || || || |||||||||||||||||||| ||||| |||||
Sbjct: 47012 aattcgctgtattctgtagggcattgagatggtagagtcacg 46971



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                         
Query: 299   cctgcgccgacgaaagacccatttgcgactatttggtttccttgactagccatgacgacc 358
             |||||||| || |||||||| ||||| ||||||||||| ||||| |||  ||    ||||
Sbjct: 47582 cctgcgccaacaaaagacccgtttgccactatttggttcccttggctactcaatgtgacc 47523

                                                                         
Query: 359   ccaatattcaagagagtaccacccatggctgtatacatggtcgccatctgaagtacgtta 418
             ||||  ||||| || || ||||| ||||||||||||||||||||||| |||||||| || 
Sbjct: 47522 ccaacgttcaacagcgtgccaccaatggctgtatacatggtcgccatttgaagtacattc 47463

                                      
Query: 419   gctttacgagcagctcgttccgact 443
             || ||||||||||||| ||| ||||
Sbjct: 47462 gccttacgagcagctctttcagact 47438



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 551   tttgcttgctttcttatctcctggactagttcaggtccagctcttcgtctcgttttcaag 610
             ||||||||||||||||||||| |||||||||||||| ||  | ||||||||  |||||||
Sbjct: 46845 tttgcttgctttcttatctcccggactagttcaggtgcacttgttcgtctctgtttcaag 46786

                           
Query: 611   tctagcagttcctg 624
             ||||| ||||||||
Sbjct: 46785 tctagaagttcctg 46772



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 621   cctgtgcatatggtgcagcaactttgacaaaggaaaaatcaggatcca 668
             |||||||||| ||||| |||||||| |||||||||||||| |||||||
Sbjct: 46524 cctgtgcataaggtgcggcaactttcacaaaggaaaaatctggatcca 46477



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 230   atcatcgtctcgaatttctcgagtttcttcactct 264
             ||||| ||||||||||| |||||||||||||||||
Sbjct: 47897 atcattgtctcgaatttgtcgagtttcttcactct 47863
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>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 74    aagttacaacattttcaggaag 95
             ||||||||||||||||||||||
Sbjct: 22087 aagttacaacattttcaggaag 22108
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 74       aagttacaacattttcaggaag 95
                ||||||||||||||||||||||
Sbjct: 21670034 aagttacaacattttcaggaag 21670055



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 549      catttgcttgctttcttatct 569
                |||||||||||||||||||||
Sbjct: 11244968 catttgcttgctttcttatct 11244988
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 74       aagttacaacattttcaggaag 95
                ||||||||||||||||||||||
Sbjct: 21980233 aagttacaacattttcaggaag 21980254



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 549      catttgcttgctttcttatct 569
                |||||||||||||||||||||
Sbjct: 11324157 catttgcttgctttcttatct 11324177
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>ref|NM_180205.1| Arabidopsis thaliana unknown protein AT3G07700 transcript variant
            AT3G07700.2 mRNA, complete cds
          Length = 2389

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
            |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 2023 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 1964

             
Query: 447  g 447
            |
Sbjct: 1963 g 1963
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>ref|NM_111649.2| Arabidopsis thaliana unknown protein AT3G07700 transcript variant
            AT3G07700.1 mRNA, complete cds
          Length = 2478

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
            |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 2112 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 2053

             
Query: 447  g 447
            |
Sbjct: 2052 g 2052
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0015P05 map C53961S, complete sequence
          Length = 175121

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 549   catttgcttgctttcttatct 569
             |||||||||||||||||||||
Sbjct: 31326 catttgcttgctttcttatct 31346
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>gb|AY080823.1| Arabidopsis thaliana unknown protein (At3g07700) mRNA, partial cds
          Length = 1897

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
            |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 1540 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 1481

             
Query: 447  g 447
            |
Sbjct: 1480 g 1480
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>emb|CR385046.9| Zebrafish DNA sequence from clone CH211-217P23 in linkage group 8,
              complete sequence
          Length = 206751

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 191    gtttttatgcacatttccataatga 215
              ||||||||||||||||||| |||||
Sbjct: 145193 gtttttatgcacatttccaaaatga 145169
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>gb|AC022536.13| Homo sapiens chromosome 10 clone RP11-38M7, complete sequence
          Length = 160678

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 123   attatttacctatgaatgagaaagc 147
             ||||||||||| |||||||||||||
Sbjct: 65756 attatttacctctgaatgagaaagc 65732
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>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15,
             complete sequence
          Length = 164720

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   tttttatgcacatttccataa 212
             |||||||||||||||||||||
Sbjct: 42341 tttttatgcacatttccataa 42361
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>gb|AY056806.1| Arabidopsis thaliana At3g07700/F17A17.4 mRNA, complete cds
          Length = 2388

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
            |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 2022 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 1963

             
Query: 447  g 447
            |
Sbjct: 1962 g 1962
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>gb|AF119906.1|AF119906 Homo sapiens PRO2859 mRNA, complete cds
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 attatttacctatgaatgagaaagc 147
           ||||||||||| |||||||||||||
Sbjct: 286 attatttacctctgaatgagaaagc 310
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>emb|BX825965.1|CNS0A6HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL76ZE08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 623

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 387 ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
           |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 319 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 260

            
Query: 447 g 447
           |
Sbjct: 259 g 259
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>emb|BX825129.1|CNS0A66K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL13ZE11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 684

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 387 ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
           |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 341 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 282

            
Query: 447 g 447
           |
Sbjct: 281 g 281
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>gb|AY088788.1| Arabidopsis thaliana clone 95043 mRNA, complete sequence
          Length = 2430

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  ctgtatacatggtcgccatctgaagtacgttagctttacgagcagctcgttccgactcaa 446
            |||||||||| ||||||||||| ||||   | ||||| || || |||| |||||||||||
Sbjct: 2112 ctgtatacatcgtcgccatctgcagtattgtcgctttccgggctgctctttccgactcaa 2053

             
Query: 447  g 447
            |
Sbjct: 2052 g 2052
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>dbj|AK120763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007G17, full
            insert sequence
          Length = 4190

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 549  catttgcttgctttcttatct 569
            |||||||||||||||||||||
Sbjct: 2359 catttgcttgctttcttatct 2379
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>gb|AC174769.1| Gasterosteus aculeatus clone VMRC28-49K14, complete sequence
          Length = 135249

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 634   tgcagcaactttgacaaaggaaaaa 658
             ||||||| |||||||||||||||||
Sbjct: 11946 tgcagcagctttgacaaaggaaaaa 11970
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>gb|AC132871.7| Mus musculus chromosome 1, clone RP24-387A12, complete sequence
          Length = 188649

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   tctacatatattatttacct 133
             ||||||||||||||||||||
Sbjct: 92231 tctacatatattatttacct 92212
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>emb|AL357140.33| Human DNA sequence from clone RP11-84A14 on chromosome 1 Contains the
             5' end of the CLSTN1 gene for calsyntenin 1, the CTNNBIP1
             gene for catenin, beta interacting protein 1, two novel
             genes, the LZIC gene for leucine zipper and CTNNBIP1
             domain containing, the 5' end of the NMNAT1 gene for
             nicotinamide nucleotide adenylyltransferase 1 and a CpG
             island, complete sequence
          Length = 177470

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   atatattatttacctatgaa 138
             ||||||||||||||||||||
Sbjct: 21028 atatattatttacctatgaa 21047
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>emb|AL110115.38|HSJ324O17 Human DNA sequence from clone RP3-324O17 on chromosome 20 Contains
            the 5' end of the ID1 gene for inhibitor of DNA binding
            1, dominant negative helix-loop-helix protein, two novel
            genes, the 3' end of the HM13 gene for histocompatibility
            (minor) 13 an MCT-1 (multiple copies in a T-cell
            malignancies) pseudogene and five CpG islands, complete
            sequence
          Length = 79419

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  ttatttacctatgaatgaga 143
            ||||||||||||||||||||
Sbjct: 3737 ttatttacctatgaatgaga 3718
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>gb|AC118584.18| Papio anubis clone rp41-78d16, complete sequence
          Length = 189610

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    cttggtttttatgcacattt 206
              ||||||||||||||||||||
Sbjct: 183304 cttggtttttatgcacattt 183285
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>emb|CR386340.1| Gallus gallus finished cDNA, clone ChEST731g19
          Length = 958

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 atttaatttctttacagaag 174
           ||||||||||||||||||||
Sbjct: 388 atttaatttctttacagaag 407
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>gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex BAC MMU103F20, complete
             sequence
          Length = 174172

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 377   ccacccatggctgtatacatggtc 400
             |||||||||| |||||||||||||
Sbjct: 32092 ccacccatggttgtatacatggtc 32115
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>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence
          Length = 220183

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gaagcacagcgatcacatca 233
              ||||||||||||||||||||
Sbjct: 108849 gaagcacagcgatcacatca 108868
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>dbj|AK174212.1| Ciona intestinalis cDNA, clone:cibd071i22, full insert sequence
          Length = 1401

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 512  attctgtagggcattgagat 531
            ||||||||||||||||||||
Sbjct: 1139 attctgtagggcattgagat 1120
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>emb|BX470160.9| Zebrafish DNA sequence from clone DKEY-25F3 in linkage group 18,
             complete sequence
          Length = 207501

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   gtttttatgcacatttccataatg 214
             |||||||||||||||| |||||||
Sbjct: 12219 gtttttatgcacattttcataatg 12196
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>emb|BX000480.6| Zebrafish DNA sequence from clone DKEY-14C5 in linkage group 17, complete
              sequence
          Length = 191781

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    aaccagtaatgccaataaaa 296
              ||||||||||||||||||||
Sbjct: 162590 aaccagtaatgccaataaaa 162571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,048,449
Number of Sequences: 3902068
Number of extensions: 6048449
Number of successful extensions: 123376
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123153
Number of HSP's gapped (non-prelim): 223
length of query: 687
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 664
effective length of database: 17,143,297,704
effective search space: 11383149675456
effective search space used: 11383149675456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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