ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6j16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX510339.8| Zebrafish DNA sequence from clone DKEYP-117E10 i... 48 0.038
2gb|AC166934.3| Mus musculus chromosome 5, clone RP23-246A17, com... 44 0.60
3gb|AC091274.11| Mus musculus chromosome 5, clone RP23-149A1, com... 44 0.60
4gb|AC147369.3| Mus musculus BAC clone RP24-392B5 from chromosome... 44 0.60
5gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome ... 44 0.60
6gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome... 44 0.60
7gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome... 44 0.60
8gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, comp... 44 0.60
9emb|AL160407.12| Human DNA sequence from clone RP11-572G24 on ch... 44 0.60
10gb|AC111648.6| Rattus norvegicus 2 BAC CH230-103N18 (Children's ... 44 0.60
11dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 44 0.60
12gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.4
13gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome... 42 2.4
14emb|AL031848.11|HS202O8 Human DNA sequence from clone RP1-202O8 ... 42 2.4
15emb|AL035552.9|HS162O13 Human DNA sequence from clone RP6-162O13... 42 2.4
16emb|CR536621.7| Zebrafish DNA sequence from clone CH211-158M1, c... 42 2.4
17gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome... 42 2.4
18dbj|AK075652.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 42 2.4
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
20emb|BX827945.1|CNS0A30Q Arabidopsis thaliana Full-length cDNA Co... 42 2.4
21gb|AC069157.8| Homo sapiens BAC clone RP11-796M18 from 2, comple... 42 2.4
22gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosom... 42 2.4
23gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complet... 42 2.4
24emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 ... 42 2.4
25emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 i... 42 2.4
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
27emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.4
28gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complet... 42 2.4
29gb|AC133513.3| Mus musculus BAC clone RP23-212E9 from 12, comple... 42 2.4
30emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 ... 42 2.4
31ref|XM_876440.1| PREDICTED: Bos taurus similar to Microtubule-as... 40 9.3
32ref|XM_876384.1| PREDICTED: Bos taurus similar to Microtubule-as... 40 9.3
33ref|XM_593636.2| PREDICTED: Bos taurus similar to Microtubule-as... 40 9.3
34gb|BT013342.1| Lycopersicon esculentum clone 135145F, mRNA sequence 40 9.3
35emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in ... 40 9.3
36gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 9.3
37gb|AC074359.2| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 9.3
38gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complet... 40 9.3
39gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 9.3
40emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chr... 40 9.3
41emb|AL161891.17| Human DNA sequence from clone RP11-142E9 on chr... 40 9.3
42emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chro... 40 9.3
43emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on ch... 40 9.3
44gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig co... 40 9.3
45gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, com... 40 9.3
46gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complet... 40 9.3
47gb|AY138779.1| Powellomyces variabilis alpha-tubulin (atub) gene... 40 9.3
48gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448... 40 9.3
49gb|AC108199.5| Homo sapiens BAC clone RP13-560N11 from 4, comple... 40 9.3
50gb|AC024246.8| Homo sapiens BAC clone RP11-643O14 from 2, comple... 40 9.3
51gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromoso... 40 9.3
52gb|AC046130.25| Homo sapiens 12 BAC RP11-847H18 (Roswell Park Ca... 40 9.3
53gb|AC079193.10| Homo sapiens chromosome 8, clone RP11-468H14, co... 40 9.3
54gb|AC136305.6| Homo sapiens chromosome 8, clone RP11-104K22, com... 40 9.3
55gb|AF162085.1|AF162085 Spizellomyces punctatus alpha-tubulin (at... 40 9.3
56gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome... 40 9.3
57gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.11... 40 9.3
58dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.3
59dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 9.3
60emb|Z81044.1|CEC30H6 Caenorhabditis elegans Cosmid C30H6, comple... 40 9.3
61gb|AC132325.4| Mus musculus BAC clone RP24-273K21 from chromosom... 40 9.3
62emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, ... 40 9.3
63dbj|AP003117.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.3
64dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.3
65dbj|AB020859.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 9.3 
>emb|BX510339.8| Zebrafish DNA sequence from clone DKEYP-117E10 in linkage group 20,
             complete sequence
          Length = 70879

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 213   ccaaaataagaacagttcaaactacaaataaa 244
             ||||||||||||||||| |||||| |||||||
Sbjct: 41387 ccaaaataagaacagtttaaactagaaataaa 41356
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>gb|AC166934.3| Mus musculus chromosome 5, clone RP23-246A17, complete sequence
          Length = 144203

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 208   caaacccaaaataagaacagtt 229
             ||||||||||||||||||||||
Sbjct: 85072 caaacccaaaataagaacagtt 85051
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>gb|AC091274.11| Mus musculus chromosome 5, clone RP23-149A1, complete sequence
          Length = 212532

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 208    caaacccaaaataagaacagtt 229
              ||||||||||||||||||||||
Sbjct: 161384 caaacccaaaataagaacagtt 161405
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>gb|AC147369.3| Mus musculus BAC clone RP24-392B5 from chromosome 19, complete sequence
          Length = 184037

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    caccaaacccaaaataagaaca 226
              ||||||||||||||||||||||
Sbjct: 103191 caccaaacccaaaataagaaca 103212
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>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence
          Length = 256476

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 205    caccaaacccaaaataagaaca 226
              ||||||||||||||||||||||
Sbjct: 233192 caccaaacccaaaataagaaca 233171
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>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence
          Length = 244566

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 208    caaacccaaaataagaacagtt 229
              ||||||||||||||||||||||
Sbjct: 193749 caaacccaaaataagaacagtt 193728
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>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence
          Length = 165927

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 142   atacacaattgccaaaatgcatttct 167
             |||||||||||||||||||| |||||
Sbjct: 18746 atacacaattgccaaaatgcctttct 18771
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>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence
          Length = 165789

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 66     atgtacattttagaacagctgg 87
              ||||||||||||||||||||||
Sbjct: 109865 atgtacattttagaacagctgg 109886
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>emb|AL160407.12| Human DNA sequence from clone RP11-572G24 on chromosome 9, complete
             sequence
          Length = 29606

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 154   caaaatgcatttcttaaacagt 175
             ||||||||||||||||||||||
Sbjct: 15724 caaaatgcatttcttaaacagt 15703
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>gb|AC111648.6| Rattus norvegicus 2 BAC CH230-103N18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 235343

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 25     acttacaacacagctcaaacttaaaa 50
              |||||| |||||||||||||||||||
Sbjct: 109548 acttactacacagctcaaacttaaaa 109573
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 527  aaggtaagaaagagcccatcccagtg 552
            ||||||||||||| ||||||||||||
Sbjct: 9442 aaggtaagaaagaccccatcccagtg 9467
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
             sequence
          Length = 1347793

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 389   agaagcaagagtaggtgat-ctttgctgagaaa 420
             ||||||||||| ||||||| |||||||||||||
Sbjct: 85918 agaagcaagagaaggtgatactttgctgagaaa 85886
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>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete
            sequence
          Length = 193610

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 191  gtcaagaagaaagacaccaaa 211
            |||||||||||||||||||||
Sbjct: 4820 gtcaagaagaaagacaccaaa 4840
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>emb|AL031848.11|HS202O8 Human DNA sequence from clone RP1-202O8 on chromosome 1p36.11-36.31
             Contains the 5' end of the gene for brain acyl-coA
             hydrolase (BACH), the gene for hairy and enhancer of split
             (Drosophila) homolog 2 (HES2), the 5' end of the ESPN gene
             for espin, a novel gene and four CpG islands, complete
             sequence
          Length = 143065

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   ccaaaatgcatttcttaaaca 173
             |||||||||||||||||||||
Sbjct: 82968 ccaaaatgcatttcttaaaca 82948
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>emb|AL035552.9|HS162O13 Human DNA sequence from clone RP6-162O13 on chromosome Xq21.31-21.33
             Contains the 3' end of a novel gene (FLJ30678) and a novel
             pseudogene, complete sequence
          Length = 149731

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   accaaacccaaaataagaaca 226
             |||||||||||||||||||||
Sbjct: 80874 accaaacccaaaataagaaca 80894
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>emb|CR536621.7| Zebrafish DNA sequence from clone CH211-158M1, complete sequence
          Length = 155945

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   aaaataagaacagttcaaact 235
             |||||||||||||||||||||
Sbjct: 87380 aaaataagaacagttcaaact 87360
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>gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome 13, complete sequence
          Length = 188633

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 220   aagaacagttcaaactacaaa 240
             |||||||||||||||||||||
Sbjct: 16518 aagaacagttcaaactacaaa 16498
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>dbj|AK075652.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110037P13
           product:SERINE-ARGININE-RICH SPLICING REGULATORY PROTEIN
           SRRP86 homolog [Rattus norvegicus], full insert sequence
          Length = 1264

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 220 aagaacagttcaaactacaaa 240
           |||||||||||||||||||||
Sbjct: 455 aagaacagttcaaactacaaa 435
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 215      aaaataagaacagttcaaact 235
                |||||||||||||||||||||
Sbjct: 15182858 aaaataagaacagttcaaact 15182838
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>emb|BX827945.1|CNS0A30Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH37ZF05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 906

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 414 tgagaaaggaaacagtttccc 434
           |||||||||||||||||||||
Sbjct: 344 tgagaaaggaaacagtttccc 364
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>gb|AC069157.8| Homo sapiens BAC clone RP11-796M18 from 2, complete sequence
          Length = 138029

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 513   ttgcagcaggaatgaaggtaagaaa 537
             ||||||| |||||||||||||||||
Sbjct: 24193 ttgcagctggaatgaaggtaagaaa 24217
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>gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosome 13, complete sequence
          Length = 176209

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 220    aagaacagttcaaactacaaa 240
              |||||||||||||||||||||
Sbjct: 120462 aagaacagttcaaactacaaa 120442
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>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence
          Length = 182507

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    tcaaacttaaaataattcaga 59
             |||||||||||||||||||||
Sbjct: 29788 tcaaacttaaaataattcaga 29808
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>emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 in linkage group 17,
             complete sequence
          Length = 166247

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   ttcaaactacaaataaacatt 248
             |||||||||||||||||||||
Sbjct: 93902 ttcaaactacaaataaacatt 93882
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>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17,
              complete sequence
          Length = 174580

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 228    ttcaaactacaaataaacatt 248
              |||||||||||||||||||||
Sbjct: 108757 ttcaaactacaaataaacatt 108777
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 215      aaaataagaacagttcaaact 235
                |||||||||||||||||||||
Sbjct: 15137141 aaaataagaacagttcaaact 15137121
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>emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa0063F10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153687

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 215   aaaataagaacagttcaaact 235
             |||||||||||||||||||||
Sbjct: 73060 aaaataagaacagttcaaact 73080
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>gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complete sequence
          Length = 216389

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    aaaataattcagaaccaacat 67
             |||||||||||||||||||||
Sbjct: 44907 aaaataattcagaaccaacat 44887
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>gb|AC133513.3| Mus musculus BAC clone RP23-212E9 from 12, complete sequence
          Length = 177034

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   gtcaagaagaaagacaccaaa 211
             |||||||||||||||||||||
Sbjct: 24358 gtcaagaagaaagacaccaaa 24338
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>emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 in linkage group 3,
              complete sequence
          Length = 168413

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 215    aaaataagaacagttcaaact 235
              |||||||||||||||||||||
Sbjct: 140736 aaaataagaacagttcaaact 140716
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>ref|XM_876440.1| PREDICTED: Bos taurus similar to Microtubule-associated protein 1A
            (MAP 1A) (Proliferation-related protein p80), transcript
            variant 4 (LOC515593), mRNA
          Length = 10248

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  aagaagaaagacaccaaacc 213
            ||||||||||||||||||||
Sbjct: 1802 aagaagaaagacaccaaacc 1821
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>ref|XM_876384.1| PREDICTED: Bos taurus similar to Microtubule-associated protein 1A
            (MAP 1A) (Proliferation-related protein p80), transcript
            variant 3 (LOC515593), mRNA
          Length = 10505

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  aagaagaaagacaccaaacc 213
            ||||||||||||||||||||
Sbjct: 2059 aagaagaaagacaccaaacc 2078
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>ref|XM_593636.2| PREDICTED: Bos taurus similar to Microtubule-associated protein 1A
            (MAP 1A) (Proliferation-related protein p80), transcript
            variant 1 (LOC515593), mRNA
          Length = 10302

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  aagaagaaagacaccaaacc 213
            ||||||||||||||||||||
Sbjct: 1802 aagaagaaagacaccaaacc 1821
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>gb|BT013342.1| Lycopersicon esculentum clone 135145F, mRNA sequence
          Length = 1159

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 agatcttttcatacacaatt 151
           ||||||||||||||||||||
Sbjct: 168 agatcttttcatacacaatt 187
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>emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in linkage group 1,
             complete sequence
          Length = 230420

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   aaataagaacagttcaaact 235
             ||||||||||||||||||||
Sbjct: 23024 aaataagaacagttcaaact 23043
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>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1 of
              11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 128    tcatagatcttttcatacacaatt 151
              ||||||||||||||| ||||||||
Sbjct: 108143 tcatagatcttttcaaacacaatt 108166
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>gb|AC074359.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-289J24, complete
             sequence
          Length = 106041

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   caaacccaaaataagaacag 227
             ||||||||||||||||||||
Sbjct: 46421 caaacccaaaataagaacag 46402
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>gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complete sequence
          Length = 115003

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 608   atatgctgatgaacaaagtg 627
             ||||||||||||||||||||
Sbjct: 80243 atatgctgatgaacaaagtg 80224
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       gactttgtaaaatatataag 20
               ||||||||||||||||||||
Sbjct: 1037320 gactttgtaaaatatataag 1037301
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>emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 178323

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    agatgctagaactttcttaa 495
              ||||||||||||||||||||
Sbjct: 141629 agatgctagaactttcttaa 141648
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>emb|AL161891.17| Human DNA sequence from clone RP11-142E9 on chromosome 13, complete
             sequence
          Length = 123070

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaaatggcaaacacagcaa 122
             ||||||||||||||||||||
Sbjct: 69792 acaaatggcaaacacagcaa 69773
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>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the
             SLC10A2 gene for solute carrier family 10 (sodium/bile
             acid cotransporter family, member 2, complete sequence
          Length = 171132

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   tcatagatcttttcatacacaatt 151
             ||||||||||||||| ||||||||
Sbjct: 89317 tcatagatcttttcaaacacaatt 89340
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>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   ttgggttgcagcaggaatga 527
             ||||||||||||||||||||
Sbjct: 14804 ttgggttgcagcaggaatga 14823
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>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox
              cluster, cholinesterase, and COLP5alpha genes, complete
              sequence
          Length = 796348

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ctcaaacttaaaataattca 57
              ||||||||||||||||||||
Sbjct: 101425 ctcaaacttaaaataattca 101406
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>gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, complete sequence
          Length = 189055

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   cacagaaataaaggatcaag 464
             ||||||||||||||||||||
Sbjct: 35437 cacagaaataaaggatcaag 35418
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>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence
          Length = 201215

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aaatgcatttcttaaacagt 175
             ||||||||||||||||||||
Sbjct: 15611 aaatgcatttcttaaacagt 15630
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>gb|AY138779.1| Powellomyces variabilis alpha-tubulin (atub) gene, partial cds
          Length = 1458

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  gaagcaagagtaggtgatct 409
            ||||||||||||||||||||
Sbjct: 1128 gaagcaagagtaggtgatct 1109
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>gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448G15, complete sequence
          Length = 199450

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    gtacattttagaacagctgg 87
             ||||||||||||||||||||
Sbjct: 62770 gtacattttagaacagctgg 62789
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>gb|AC108199.5| Homo sapiens BAC clone RP13-560N11 from 4, complete sequence
          Length = 91042

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    gtacattttagaacagctgg 87
             ||||||||||||||||||||
Sbjct: 64717 gtacattttagaacagctgg 64736
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>gb|AC024246.8| Homo sapiens BAC clone RP11-643O14 from 2, complete sequence
          Length = 92320

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     actttgtaaaatatataagt 21
             ||||||||||||||||||||
Sbjct: 87470 actttgtaaaatatataagt 87451
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>gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromosome 7, complete
             sequence
          Length = 164152

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    agctcaaacttaaaataatt 55
             ||||||||||||||||||||
Sbjct: 94921 agctcaaacttaaaataatt 94940
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>gb|AC046130.25| Homo sapiens 12 BAC RP11-847H18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176600

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cacagcaagaaaatcataga 134
              ||||||||||||||||||||
Sbjct: 160283 cacagcaagaaaatcataga 160302
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>gb|AC079193.10| Homo sapiens chromosome 8, clone RP11-468H14, complete sequence
          Length = 169041

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   gtgaagcaagcaactttttc 569
             ||||||||||||||||||||
Sbjct: 86175 gtgaagcaagcaactttttc 86194
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>gb|AC136305.6| Homo sapiens chromosome 8, clone RP11-104K22, complete sequence
          Length = 156524

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 550  gtgaagcaagcaactttttc 569
            ||||||||||||||||||||
Sbjct: 6622 gtgaagcaagcaactttttc 6603
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>gb|AF162085.1|AF162085 Spizellomyces punctatus alpha-tubulin (atub) gene, partial cds
          Length = 1304

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 gaagcaagagtaggtgatct 409
           ||||||||||||||||||||
Sbjct: 974 gaagcaagagtaggtgatct 955
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>gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome 9, complete sequence
          Length = 192639

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   aaatggcaaacacagcaaga 124
             ||||||||||||||||||||
Sbjct: 65125 aaatggcaaacacagcaaga 65106
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>gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.112_J_9, complete sequence
          Length = 179651

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    cacagaaataaaggatcaag 464
              ||||||||||||||||||||
Sbjct: 120060 cacagaaataaaggatcaag 120041
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>dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-679A11, complete
             sequence
          Length = 176713

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    acacagctcaaacttaaaat 51
             ||||||||||||||||||||
Sbjct: 50514 acacagctcaaacttaaaat 50533
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>dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-702B3, complete
             sequence
          Length = 170015

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   gtgaagcaagcaactttttc 569
             ||||||||||||||||||||
Sbjct: 55500 gtgaagcaagcaactttttc 55519
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>emb|Z81044.1|CEC30H6 Caenorhabditis elegans Cosmid C30H6, complete sequence
          Length = 35350

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   cactgtacaaatttacaaat 108
            ||||||||||||||||||||
Sbjct: 1366 cactgtacaaatttacaaat 1385
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>gb|AC132325.4| Mus musculus BAC clone RP24-273K21 from chromosome 12, complete
             sequence
          Length = 152661

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   agaaagacaccaaacccaaa 217
             ||||||||||||||||||||
Sbjct: 33090 agaaagacaccaaacccaaa 33109
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>emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, complete sequence
          Length = 174293

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   aaataagaacagttcaaact 235
             ||||||||||||||||||||
Sbjct: 59464 aaataagaacagttcaaact 59445
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>dbj|AP003117.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1958F4
          Length = 152176

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aaatcatagatcttttcata 144
             ||||||||||||||||||||
Sbjct: 17023 aaatcatagatcttttcata 17004
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>dbj|AP003111.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1255G1
          Length = 171035

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaatcatagatcttttcata 144
              ||||||||||||||||||||
Sbjct: 113691 aaatcatagatcttttcata 113672
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>dbj|AB020859.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 2/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   gtgaagcaagcaactttttc 569
             ||||||||||||||||||||
Sbjct: 16448 gtgaagcaagcaactttttc 16467


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,432,056
Number of Sequences: 3902068
Number of extensions: 8432056
Number of successful extensions: 175715
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 175398
Number of HSP's gapped (non-prelim): 319
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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