ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6j14 |
|---|---|
| Clone Library Name | barley_pub |
>FRAP_RAT (P42346) FKBP12-rapamycin complex-associated protein (FK506-binding| protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) Length = 2549 Score = 86.3 bits (212), Expect = 8e-17 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 4/160 (2%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAFV+DPL+NWRL + N + +++ EL +P + Sbjct: 2416 AVLEAFVYDPLLNWRLMDTNAKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKTGTTV 2475 Query: 487 LQAVNQ-LGDA---NEVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLAS 320 ++++ +GD E LN++A+ ++ R+ KLTGRDF Sbjct: 2476 PESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSH-------------------- 2515 Query: 319 VDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 + L V QV+ LI QATSHENLCQ Y+GWCPFW Sbjct: 2516 ------DDTLDVPTQVELLIKQATSHENLCQCYIGWCPFW 2549
>FRAP_MOUSE (Q9JLN9) FKBP12-rapamycin complex-associated protein (FK506-binding| protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) Length = 2549 Score = 86.3 bits (212), Expect = 8e-17 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 4/160 (2%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAFV+DPL+NWRL + N + +++ EL +P + Sbjct: 2416 AVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKAGTTV 2475 Query: 487 LQAVNQ-LGDA---NEVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLAS 320 ++++ +GD E LN++A+ ++ R+ KLTGRDF Sbjct: 2476 PESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSH-------------------- 2515 Query: 319 VDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 + L V QV+ LI QATSHENLCQ Y+GWCPFW Sbjct: 2516 ------DDTLDVPTQVELLIKQATSHENLCQCYIGWCPFW 2549
>FRAP_HUMAN (P42345) FKBP12-rapamycin complex-associated protein (FK506-binding| protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) Length = 2549 Score = 86.3 bits (212), Expect = 8e-17 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 4/160 (2%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAFV+DPL+NWRL + N + +++ EL +P + Sbjct: 2416 AVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKTGTTV 2475 Query: 487 LQAVNQ-LGDA---NEVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLAS 320 ++++ +GD E LN++A+ ++ R+ KLTGRDF Sbjct: 2476 PESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSH-------------------- 2515 Query: 319 VDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 + L V QV+ LI QATSHENLCQ Y+GWCPFW Sbjct: 2516 ------DDTLDVPTQVELLIKQATSHENLCQCYIGWCPFW 2549
>TOR1_SCHPO (O14356) Phosphatidylinositol 3-kinase tor1 (EC 2.7.1.137)| (PtdIns-3-kinase tor1) (PI3-kinase tor1) (PI3K tor1) Length = 2335 Score = 83.2 bits (204), Expect = 7e-16 Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 1/157 (0%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAFV+DPLINWRL S++G + T R A Sbjct: 2215 AVLEAFVYDPLINWRLMT------KSSFGASTTLRPTSSSVEEKGRSYTHRARHAD---- 2264 Query: 487 LQAVNQLGDAN-EVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLASVDA 311 A+++ N E LNER++ V+ R+S+KLTG+DF Sbjct: 2265 YAALSETNGVNAEGLNERSIQVLKRVSNKLTGKDF------------------------- 2299 Query: 310 REVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 +++ L VK QV+KLI QAT+ ENLC+ YVGWC FW Sbjct: 2300 -DLKEQLPVKAQVEKLIQQATAPENLCRCYVGWCSFW 2335
>TOR2_SCHPO (Q9Y7K2) Phosphatidylinositol 3-kinase tor2 (EC 2.7.1.137)| (PtdIns-3-kinase tor2) (PI3-kinase tor2) (PI3K tor2) Length = 2337 Score = 82.8 bits (203), Expect = 9e-16 Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 2/158 (1%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAFV+DPLINWRL A++ ++ L + G K L Sbjct: 2218 AVLEAFVYDPLINWRL------------APAYSPSIDEKQSNEPNTLLGETIDGLHRKRL 2265 Query: 487 LQAVNQLGDAN--EVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLASVD 314 + L + E+LN+RA+ V+ R+S+KLTGRDF Sbjct: 2266 NEEGITLEERQKPEILNQRAITVLNRVSNKLTGRDF------------------------ 2301 Query: 313 AREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 + + L V QV+KLILQATS ENLC Y+GWC FW Sbjct: 2302 --KPQQQLDVPSQVEKLILQATSIENLCLCYIGWCSFW 2337
>TOR2_YEAST (P32600) Phosphatidylinositol 3-kinase TOR2 (EC 2.7.1.137)| (PtdIns-3-kinase TOR2) (PI3-kinase TOR2) (PI3K TOR2) Length = 2473 Score = 67.4 bits (163), Expect = 4e-11 Identities = 51/156 (32%), Positives = 64/156 (41%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAF DPLINW ++P V GA +E Sbjct: 2356 AILEAFAFDPLINWGF----DLPTKKIEEETGIQLPVMNANELLS-------NGAITEEE 2404 Query: 487 LQAVNQLGDANEVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLASVDAR 308 +Q V N + N RA+ V+ R++ KLTG D Sbjct: 2405 VQRVEN-EHKNAIRNARAMLVLKRITDKLTGNDIRRFND--------------------- 2442 Query: 307 EVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 L V QV KLI QATS ENLCQ+Y+GWCPFW Sbjct: 2443 -----LDVPEQVDKLIQQATSVENLCQHYIGWCPFW 2473
>TOR1_YEAST (P35169) Phosphatidylinositol 3-kinase TOR1 (EC 2.7.1.137)| (PtdIns-3-kinase TOR1) (PI3-kinase TOR1) (PI3K TOR1) Length = 2470 Score = 65.9 bits (159), Expect = 1e-10 Identities = 51/156 (32%), Positives = 65/156 (41%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAF DPLI+W F+ PQ T + L + E Sbjct: 2353 AILEAFALDPLIHW---GFDLPPQ-----KLTEQTGIPLPLINPSELLRKGAITVEEAAN 2404 Query: 487 LQAVNQLGDANEVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLASVDAR 308 ++A Q NE N RA+ V+ R++ KLTG D Sbjct: 2405 MEAEQQ----NETKNARAMLVLRRITDKLTGNDIKRFNE--------------------- 2439 Query: 307 EVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 L V QV KLI QATS E LCQ+Y+GWCPFW Sbjct: 2440 -----LDVPEQVDKLIQQATSIERLCQHYIGWCPFW 2470
>TOR_CAEEL (Q95Q95) Target of rapamycin homolog (EC 2.7.11.1) (CeTOR) (Lethal| protein 363) Length = 2697 Score = 50.4 bits (119), Expect = 5e-06 Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 2/158 (1%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 A++EAFV+DP+INWRL + + P+ ++ Sbjct: 2593 AVLEAFVYDPVINWRLVE----------------------------GMKKDPKTRKDTGG 2624 Query: 487 LQAVNQLGDANEVLNERAV--AVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLASVD 314 Q + A VL + ++M + KL G +F D Sbjct: 2625 RQNM-----AGAVLPSSSTTDSIMETIKRKLDGTEF--------------------VHTD 2659 Query: 313 AREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 L V Q+ L QATS NLCQ+Y+GWCPFW Sbjct: 2660 GSTPPEPLQVTEQLAMLTEQATSPLNLCQSYIGWCPFW 2697
>ATR_ASHGO (Q75DB8) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2324 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/40 (52%), Positives = 27/40 (67%) Frame = -2 Query: 319 VDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 +D R+ P LSV QV ++ QA+S ENL Q Y+GW PFW Sbjct: 2286 IDPRDDLP-LSVPGQVDTVVQQASSDENLAQMYIGWLPFW 2324
>ATR_CANGA (Q6FX42) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2379 Score = 42.0 bits (97), Expect = 0.002 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 LSV Q + LI +ATS ENL + Y+GW PFW Sbjct: 2349 LSVSGQAETLIQEATSTENLSKMYIGWLPFW 2379
>ATR_YEAST (P38111) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2368 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 LSV Q + LI +ATS +NL + Y+GW PFW Sbjct: 2338 LSVAGQTETLIQEATSEDNLSKMYIGWLPFW 2368
>ATM_DEBHA (Q6BV76) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2948 Score = 40.0 bits (92), Expect = 0.006 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = -2 Query: 295 GLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 GLSV+ V++L+ +ATS NL Y GWCPF+ Sbjct: 2917 GLSVEAIVRELVQEATSPHNLALIYCGWCPFY 2948
>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2287 Score = 39.7 bits (91), Expect = 0.008 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -2 Query: 334 EHLASVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 + + +DAR+ LSV QV+ L ++ S ENL + Y+GW PFW Sbjct: 2244 DKIRGIDARD-GLALSVSGQVEALTQESCSVENLSKMYIGWLPFW 2287
>ATM_YEAST (P38110) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2787 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = -2 Query: 328 LASVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 L V+ + + GLSV+ VQ LI QAT NL Y+GW PF+ Sbjct: 2745 LKGVEEKLMGNGLSVESSVQDLIQQATDPSNLSVIYMGWSPFY 2787
>ATM_KLULA (Q6CP76) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2761 Score = 39.3 bits (90), Expect = 0.011 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -2 Query: 328 LASVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 L V+++ GLSV+ VQ+L+ AT +NL Y+GW PF+ Sbjct: 2719 LKGVESKLYGDGLSVEAIVQELLSSATDKQNLATIYMGWSPFY 2761
>ATM_CANAL (Q5ABX0) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2873 Score = 36.6 bits (83), Expect = 0.070 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = -2 Query: 295 GLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 GLS + V++LI +ATS +NL Y GW PF+ Sbjct: 2842 GLSTEAAVRELIQEATSTQNLALIYFGWSPFY 2873
>ATM_ASHGO (Q751J3) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2768 Score = 36.2 bits (82), Expect = 0.092 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = -2 Query: 328 LASVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 L V+ + + GLSV+ VQ+L+ +AT NL ++GW PF+ Sbjct: 2726 LKGVEDKLLGNGLSVEATVQELVHRATDVSNLAVIFMGWSPFY 2768
>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)| (hSMG-1) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein) (61E3.4) Length = 3657 Score = 33.9 bits (76), Expect = 0.45 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 325 ASVDAREVEPG--LSVKVQVQKLILQATSHENLCQNYVGW 212 A ++ R+V+P +SV QV +I +AT+ +NL Q Y GW Sbjct: 3614 AKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGW 3653
>SMG1_MOUSE (Q8BKX6) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)| Length = 3658 Score = 33.9 bits (76), Expect = 0.45 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 325 ASVDAREVEPG--LSVKVQVQKLILQATSHENLCQNYVGW 212 A ++ R+V+P +SV QV +I +AT+ +NL Q Y GW Sbjct: 3615 AKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGW 3654
>ATR_HUMAN (Q13535) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein) (FRAP-related protein 1) Length = 2644 Score = 33.5 bits (75), Expect = 0.59 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGWCPF 203 LS++ V LI +AT LCQ Y+GW P+ Sbjct: 2614 LSIEGHVHYLIQEATDENLLCQMYLGWTPY 2643
>ATR_MOUSE (Q9JKK8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein) Length = 2635 Score = 33.5 bits (75), Expect = 0.59 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGWCPF 203 LS++ V LI +AT LCQ Y+GW P+ Sbjct: 2605 LSIEGHVHYLIQEATDENLLCQMYLGWTPY 2634
>ATM_EMENI (Q5BHE2) Serine/threonine-protein kinase tel1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1) (ATM homolog) Length = 2793 Score = 32.7 bits (73), Expect = 1.0 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -2 Query: 322 SVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPF 203 +V A+++ LSV V +LI QAT +NL Y GW + Sbjct: 2753 TVVAKKLSKTLSVTATVNELIQQATDEKNLAVLYCGWAAY 2792
>ATM_CANGA (Q6FRZ9) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2763 Score = 32.7 bits (73), Expect = 1.0 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 295 GLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 GL+++ V+KLI +A NL + GW PF+ Sbjct: 2732 GLTIEATVEKLIQEAVDESNLALIFNGWSPFY 2763
>RAD3_SCHPO (Q02099) Protein kinase rad3 (EC 2.7.11.1) (DNA-repair protein rad3)| Length = 2386 Score = 32.3 bits (72), Expect = 1.3 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 LS++ Q+Q+LI A + +NL + Y+GW ++ Sbjct: 2356 LSIEGQIQELIKSAVNPKNLVEMYIGWAAYF 2386
>ATM_ASPFU (Q4WVM7) Serine/threonine-protein kinase tel1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1) (ATM homolog) Length = 2796 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2 Query: 322 SVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPF 203 +V A+++ LSV V +LI QAT NL Y GW + Sbjct: 2756 TVVAKKLSKTLSVTATVNELIQQATDERNLAVLYCGWAAY 2795
>ATM_ASPOR (Q2U639) Serine/threonine-protein kinase tel1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1) (ATM homolog) Length = 2925 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -2 Query: 322 SVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPF 203 +V A+++ LSV V +LI QAT +NL Y GW + Sbjct: 2885 TVVAKKLGKTLSVTATVNELIQQATDEKNLAVLYCGWAAY 2924
>PRKDC_CANFA (Q8WN22) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)| (DNA-PK catalytic subunit) (DNA-PKcs) Length = 4144 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = -2 Query: 322 SVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPF 203 ++ A++ E GLS + QV+ LI QAT L + ++GW P+ Sbjct: 4104 NIRAQQPENGLSEEAQVKCLIDQATDPNILGRTWIGWEPW 4143
>PPCKM_CHICK (P21642) Phosphoenolpyruvate carboxykinase [GTP], mitochondrial| precursor (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-M) Length = 640 Score = 31.6 bits (70), Expect = 2.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +NAGRYL W S G + P +FH+ F Sbjct: 506 YNAGRYLEHWLSTGLRSNARLPRLFHVNWF 535
>MATK_LEMTR (Q8WHL4) Maturase K (Intron maturase)| Length = 512 Score = 31.6 bits (70), Expect = 2.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 655 AFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVV 557 A HD +N FNE P++S YGN ++ +V Sbjct: 30 ALAHDQGLNVNASTFNEPPEISGYGNKYSSLLV 62
>MATK_LEMMI (Q8WHL7) Maturase K (Intron maturase)| Length = 512 Score = 31.6 bits (70), Expect = 2.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 655 AFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVV 557 A HD +N FNE P++S YGN ++ +V Sbjct: 30 ALAHDQGLNVNASTFNEPPEISGYGNKYSSLLV 62
>ATM_DROME (Q5EAK6) Serine/threonine-protein kinase ATM (EC 2.7.11.1) (Telomere| fusion protein) Length = 2767 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -2 Query: 289 SVKVQVQKLILQATSHENLCQNYVGWCP 206 +V+ QV++LI +AT NLC + GW P Sbjct: 2738 NVEAQVERLINEATLPSNLCMLFPGWDP 2765
>ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein) (Xatr) Length = 2654 Score = 31.2 bits (69), Expect = 2.9 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 2/157 (1%) Frame = -2 Query: 667 AMMEAFVHDPLINWRLFNFNEVPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKEL 488 ++++ F+HDPL+ W +P RG+ + Sbjct: 2562 SVLKPFLHDPLVEWS----------------------------------KPARGSSK--- 2584 Query: 487 LQAVNQLGDANEVLNERAVAVMARMSHKLTGRDFXXXXXXXXXXXXXXXXSEHLASVDAR 308 Q+ + EV+NE+A + + +L G + R Sbjct: 2585 ----GQVNETGEVMNEKAKTHVLDIEQRLQG------------------------VIKTR 2616 Query: 307 EVEPGLSVKVQ--VQKLILQATSHENLCQNYVGWCPF 203 GL + ++ V LI +AT L Q Y+GW P+ Sbjct: 2617 NRVKGLPLSIEGHVHYLIQEATDENLLSQMYLGWAPY 2653
>ATR_ORYSA (Q5Z987) Serine/threonine-protein kinase ATR (EC 2.7.11.1)| Length = 2710 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGW 212 LSV+ Q ++LI +A SH NL + YV W Sbjct: 2680 LSVEGQARRLIAEAVSHSNLGKMYVWW 2706
>PRKDC_MOUSE (P97313) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)| (DNA-PK catalytic subunit) (DNA-PKcs) (P460) Length = 4128 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = -2 Query: 322 SVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPF 203 ++ A+E E GLS + QV+ L+ QAT L + + GW P+ Sbjct: 4088 NIRAQEPESGLSEETQVKCLVDQATDPNILGRTWEGWEPW 4127
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 30.4 bits (67), Expect = 5.0 Identities = 17/57 (29%), Positives = 23/57 (40%) Frame = -2 Query: 604 VPQVSNYGNAHTHTVVXXXXXXXXXELMQPPRGAREKELLQAVNQLGDANEVLNERA 434 VPQ + G AH L PP +K+L+Q N LG + + E A Sbjct: 285 VPQPQHAGIAHAGPAPTQNPLAQQYYLPMPPNARTQKDLVQIDNLLGQMQDTIYENA 341
>PPCKC_RAT (P07379) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +N G+YLA W S A P +FH+ F Sbjct: 488 YNFGKYLAHWLSMAHRPAAKLPKIFHVNWF 517
>PPCKC_PONPY (Q5R5J1) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +N G+YLA W S A P +FH+ F Sbjct: 488 YNFGKYLAHWLSMAQHPAAKLPKIFHVNWF 517
>PPCKC_MOUSE (Q9Z2V4) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +N G+YLA W S A P +FH+ F Sbjct: 488 YNFGKYLAHWLSMAHRPAAKLPKIFHVNWF 517
>PPCKC_HUMAN (P35558) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +N G+YLA W S A P +FH+ F Sbjct: 488 YNFGKYLAHWLSMAQHPAAKLPKIFHVNWF 517
>PPCKC_CHICK (P05153) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +N G+YLA W S A P +FH+ F Sbjct: 488 YNFGKYLAHWLSMAHRPAAKLPRIFHVNWF 517
>PPCKC_BOVIN (Q8HYZ4) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 102 HNAGRYLARWYSCGSAAAPYYPTVFHLTHF 13 +N G+YLA W S A P +FH+ F Sbjct: 488 YNFGQYLAHWLSMAQRPAAKLPKIFHVNWF 517
>PRKDC_HUMAN (P78527) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)| (DNA-PK catalytic subunit) (DNA-PKcs) (DNPK1) (p460) Length = 4128 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = -2 Query: 322 SVDAREVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPF 203 ++ A+E E GLS + QV+ L+ QAT L + + GW P+ Sbjct: 4088 NIRAQEPESGLSEETQVKCLMDQATDPNILGRTWEGWEPW 4127
>MATK_LEMGI (Q8WHL6) Maturase K (Intron maturase)| Length = 512 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 646 HDPLINWRLFNFNEVPQVSNYGNAHTHTVV 557 HD +N FNE P++S YGN ++ +V Sbjct: 33 HDQGLNVNASTFNEPPEISGYGNKYSSLLV 62
>P210L_MOUSE (Q9D2F7) Nuclear pore membrane glycoprotein 210-like precursor| (Nucleoporin 210 kDa-like) Length = 1881 Score = 30.0 bits (66), Expect = 6.6 Identities = 28/94 (29%), Positives = 41/94 (43%) Frame = +1 Query: 112 QMAFSYKLPTYLCNTPYLQYVQRSALLEFTKKGTTRHSSGTNFHAKSLEV*ASEPEPSRI 291 ++ SY L TYL NTP +A F G + G+ +++L I Sbjct: 1555 RLTLSYDLKTYLTNTP-----NATAFKLFISTGRNVNLKGSCTPSQAL----------AI 1599 Query: 292 IQVLPPEHLRRLNVHCHVDWSHHLLTMSIQKKSH 393 +VL PE L + CHV +S+ LL + K H Sbjct: 1600 EKVLLPETL----MLCHVQFSNTLLDIPASKVFH 1629
>ATM_YARLI (Q6CAD2) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2282 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 292 LSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 LS + V++LI +A S ENL + GW PF+ Sbjct: 2252 LSTEAVVRELIGEAVSVENLAVIFHGWTPFY 2282
>ATR_ARATH (Q9FKS4) Serine/threonine-protein kinase ATR (EC 2.7.11.1)| (DNA-repair protein ATR) (AtATR) (Ataxia telangiectasia-mutated and Rad3-related homolog) (Rad3-like protein) (AtRAD3) Length = 2702 Score = 29.6 bits (65), Expect = 8.6 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%) Frame = -2 Query: 328 LASVDAR----EVEPGLSVKVQVQKLILQATSHENLCQNYVGWCPFW 200 ++S++AR V L V+ Q ++LI A S ENL + Y+ W P++ Sbjct: 2656 ISSIEARLQGVVVGVPLPVEGQARRLIADAVSLENLGKMYIWWMPWF 2702 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,337,648 Number of Sequences: 219361 Number of extensions: 1765673 Number of successful extensions: 4060 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4050 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
