>SAHH2_MOUSE (Q80SW1) Putative adenosylhomocysteinase 2 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 2) (AdoHcyase 2)
           (S-adenosylhomocysteine hydrolase-like 1) (IP3R-binding
           protein released with inositol 1,4,5-trisphosphate)
          Length = 530

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +2

Query: 257 AATARKEIAGLLWSG-----WWWWCR*CEEADGWQKGGRRWDGPQLTSFLWRR 400
           AA A   +A   W G     +WW    C   DGWQ      DG  LT +++++
Sbjct: 188 AALAEAGVAVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKK 240

>SAHH2_HUMAN (O43865) Putative adenosylhomocysteinase 2 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 2) (AdoHcyase 2)
           (S-adenosylhomocysteine hydrolase-like 1) (DC-expressed
           AHCY-like molecule)
          Length = 530

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +2

Query: 257 AATARKEIAGLLWSG-----WWWWCR*CEEADGWQKGGRRWDGPQLTSFLWRR 400
           AA A   +A   W G     +WW    C   DGWQ      DG  LT +++++
Sbjct: 188 AALAEAGVAVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKK 240

>CBIJ_METTH (O27083) Probable cobalt-precorrin-6A reductase (EC 1.3.1.-)|
          Length = 302

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
 Frame = +2

Query: 386 FLWRR-ALSPGIS*VRRKGSFR-----ACHVSLGP----RGTGRLTGSPWALVVAFRST- 532
           +LWRR  ++PG   V+RKGS R     +  V  G     R   RL+G PW  V A  +T 
Sbjct: 13  YLWRRKTMNPGDKGVKRKGSDRQREKMSVIVMAGTEDARRIISRLSGMPWVEVTATATTE 72

Query: 533 ---NLSEGMIGARFVVEDIDS 586
              +L+E    +R V   +DS
Sbjct: 73  HGSDLAEKSGASRTVTGALDS 93

>CSW_DROSI (Q8ISC9) Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)|
           (Fragment)
          Length = 555

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 23/60 (38%), Positives = 28/60 (46%)
 Frame = +2

Query: 113 RPSFSHSKAQRKHSSALHSPRCNAKRGPGETGFYFQSQHKR*KRDTNLAATARKEIAGLL 292
           R S S SK +R  SSA  SP   +  GPG +G    S        TNL +     +AGLL
Sbjct: 66  RKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLAGLL 125

>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP)
          Length = 1983

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -3

Query: 521 RPLPEPTGSP*GGPCLWDPGTRGMPETTPSGAPMRCRARGLSSKGSSSAEDHPTDARPS 345
           +PLP+ TG P  G     P  R  P T PS A  + R         SSA    + + PS
Sbjct: 205 QPLPQTTGQPASGSSHLQPMQR--PSTLPSSAGYQLRVGQFGQHYQSSASSSSSSSFPS 261

>K1949_MOUSE (Q8BQ30) Protein KIAA1949 homolog|
          Length = 594

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
 Frame = -1

Query: 583 VDVLHHKPGADHAFRQVCGPEGHYQSPRGAREAARASG----TQGHVACPKRPLPAHL*D 416
           +D    KP    +  +  GP G        +E A A       Q ++     PLP     
Sbjct: 330 IDTQTQKPDPPASSEKHPGPSGMEAEEEAEKEEAEAQSRPLRAQQNLCSGPSPLPPE--H 387

Query: 415 AGREGSPPKEARQLRTIPPTPALL 344
           +G EGS  +E       PPTPA L
Sbjct: 388 SGTEGSRQQEEEAAEPRPPTPAPL 411

>VPRA_DENPO (P25687) Intestinal toxin 1 (Mamba intestinal toxin 1) (MIT 1)|
           (MIT1) (Venom protein A)
          Length = 81

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 396 GEPSRPASHRCAGRGRFGHATCPWVPEARAASRAPR 503
           GE   PASH+    G+  H TCP  P       +P+
Sbjct: 38  GEDCHPASHKIPFSGQRMHHTCPCAPNLACVQTSPK 73

>DPOG2_HUMAN (Q9UHN1) DNA polymerase gamma subunit 2, mitochondrial precursor|
           (EC 2.7.7.7) (Mitochondrial DNA polymerase accessory
           subunit) (PolG-beta) (MtPolB) (DNA polymerase gamma
           accessory 55 kDa subunit) (p55)
          Length = 485

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = -1

Query: 643 RQGADPSWWRARHS-REAVPAVDVLHHKPG----ADHAFRQV 533
           R+     WW +    RE V  VD LHHKPG     D AFR V
Sbjct: 107 RKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFRLV 148

>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C)
           (IP3K-C)
          Length = 683

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 22/56 (39%), Positives = 25/56 (44%)
 Frame = +1

Query: 352 RASVGWSSADELPLEESPLARHLIGAPEGVVSGMPRVPGSQRHGPPHGLPVGSGSG 519
           R S+  + A  LP      AR  + AP G   G  R PG QR GP  G P G   G
Sbjct: 7   RGSLNEAEAGALPAA----ARMGLEAPRG---GRRRQPGQQRPGPGAGAPAGRPEG 55

>GATC_DROME (P91623) GATA-binding factor-C (Transcription factor GATA-C)|
           (dGATA-C) (Protein grain)
          Length = 486

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
 Frame = -1

Query: 607 HSREAVPAVDVLHHKPGADHAFRQVCGPEGHYQ-SPRGARE----AARASGTQGHVACPK 443
           H R   P+      +  + HA  QVC P  H   SP    E    A  ++ + G  ACP+
Sbjct: 96  HHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQ 155

Query: 442 RPLPAH-L*DAGREGSPPKEARQLRTIPPTP 353
            P   H L   G+        +     PPTP
Sbjct: 156 EPQVEHKLGQMGQSHQTTAAGQHSFPFPPTP 186

>RAD52_EMENI (Q96UP6) DNA repair and recombination protein radC (RAD52 homolog)|
          Length = 582

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 526 PEGHYQSPRGAREAARASGTQGHVACPKRP-LPAHL*DAGREGSPPKEARQLRTIPP 359
           P  H   P+ A   A+ASG Q HV  P +P  P +L  AGR+   P +A   R  PP
Sbjct: 271 PNAHLNLPKHAL-GAQASGNQ-HVVTPSKPERPMNLAPAGRQ--IPNQALNNRPFPP 323

>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 707

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 19/47 (40%), Positives = 21/47 (44%)
 Frame = -3

Query: 563 TGRRSCLPTGLWT*RPLPEPTGSP*GGPCLWDPGTRGMPETTPSGAP 423
           T   +  PT   T RP   PT SP G P     G  G P  +PS AP
Sbjct: 462 TAPPTACPTWPATVRPSEHPTTSPTGAP---SAGPTGPPTASPSAAP 505

>RECO_GEOSL (Q74FM9) DNA repair protein recO (Recombination protein O)|
          Length = 243

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 26/75 (34%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
 Frame = +3

Query: 273 RRSPDYCXXXXXXXVDDAKRQMDGRRAGVGGMVLS*RASFGGEPSRPAS----HRCAGRG 440
           R S D C         DA      RRAG  G VL       G P    +    HRC G G
Sbjct: 147 RLSLDACAACGVEFPADA-----ARRAGAAGTVLCTGCGRYGAPLSAETVRLLHRCLGTG 201

Query: 441 RFGHATCPWVPEARA 485
           RFG    P  P   A
Sbjct: 202 RFGAIVFPPEPLGEA 216

>GRB10_MOUSE (Q60760) Growth factor receptor-bound protein 10 (GRB10 adaptor|
           protein)
          Length = 621

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +3

Query: 402 PSRPASHRCAGRGRFGHATCPWVPEARAASRAPRGLW*WPSGPQTCRKA*SAPGLWWRTS 581
           PS+P +  C GR         W+P         R +W W   P       + PGLW +T+
Sbjct: 109 PSQPPAKHC-GRCE------KWIPGENTRGNGKRKIWRWQFPPGFQLSKLTRPGLWTKTT 161

>CCNL1_BRARE (Q7ZVX0) Cyclin-L1|
          Length = 498

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = +2

Query: 56  GK*HGRLGSHTNNTKHIYHRPSFSHSKAQRKHSSALHSPRCNAKR 190
           GK H R  S + +T    HR   SHS     HSS   SPR  A+R
Sbjct: 365 GKNHSR--SRSRSTSRSPHRHRRSHSGTYSSHSSHSPSPRQKARR 407

>CSW_DROME (P29349) Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)|
          Length = 845

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 22/60 (36%), Positives = 27/60 (45%)
 Frame = +2

Query: 113 RPSFSHSKAQRKHSSALHSPRCNAKRGPGETGFYFQSQHKR*KRDTNLAATARKEIAGLL 292
           R S S SK +R  SSA  SP   +  GPG +G    S        TNL +     + GLL
Sbjct: 356 RKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLL 415

>FAK1_XENLA (Q91738) Focal adhesion kinase 1 (EC 2.7.10.2) (FADK 1) (pp125FAK)|
          Length = 1068

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
 Frame = -1

Query: 619  WRARHSREAVPAVDVLHHKPGADHAFRQVCGPEGHYQSPRGAREAARASGTQGHVACPKR 440
            W  +  R   P  DV   +   DH        +G+ Q P G +   +  G   HVA PK+
Sbjct: 838  WLEKEERFLKP--DVRLSRGSVDHV-------DGNIQCPAGNQHIYQPVGKPDHVAPPKK 888

Query: 439  P----LPAHL*DAGREGSP 395
            P     P+HL +     SP
Sbjct: 889  PPRPGAPSHLGNLPAHNSP 907

>YNK2_CAEEL (P34553) Hypothetical protein R10E12.2|
          Length = 395

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 41  P*DSTGK*HGRLGSHTNNTKHIYHRPSFSHSKAQRKHSSALH 166
           P DS    HG  GSH N   H+Y+     H + Q  H S ++
Sbjct: 298 PLDSASSLHGSGGSHQN--PHMYNSHHHQHQQQQNAHPSEMY 337

>BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like protein)|
          Length = 726

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 467 PGTRGMPETTPSGAPMRCRARGLSSKGSSSAEDHPTDARPS 345
           P  +  P + PSG P R  +   S  GSSS+    +D+  S
Sbjct: 685 PARKEKPGSAPSGGPSRLSSSSSSESGSSSSSGSSSDSSDS 725

>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1|
          Length = 950

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = -3

Query: 506  PTGSP*GGPCLWDPGTR----GMPETTPSGAPMRCRARGLSSKGSSSAEDHPTDARPSA 342
            PTGS  G P     GTR     + +  P  AP R +A   S+  SSS +D      PSA
Sbjct: 862  PTGSAQGSPGADARGTRSGHDSIKQEAPDAAPRRSKA--FSNSSSSSEKDELESPPPSA 918

>CLK1_MOUSE (P22518) Dual specificity protein kinase CLK1 (EC 2.7.12.1)|
           (CDC-like kinase 1) (Protein kinase STY)
          Length = 483

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 113 RPSFSHSKAQRKHSSALHSPRCNAKRGPGETGFYFQSQ 226
           R S SH + +R HSSA    RC          +Y +S+
Sbjct: 23  RSSSSHKRKKRSHSSAREQKRCRYDHSKTTDSYYLESR 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,770,965
Number of Sequences: 219361
Number of extensions: 2588910
Number of successful extensions: 8646
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8618
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)