ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence 293 3e-76
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 224 2e-55
3gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 224 2e-55
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
5dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
6dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
7dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
8dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
9dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
10gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal pr... 216 5e-53
11gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 56 1e-04
12gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 54 4e-04
13dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 50 0.007
14emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 48 0.026
15dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 48 0.026
16gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, comple... 46 0.10
17gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complet... 46 0.10
18emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 o... 44 0.40
19gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.6
20gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, com... 42 1.6
21emb|X56552.1|TASPCOP T.aquaticus spc operon for ribosomal protei... 42 1.6
22gb|S77828.1| ribosomal protein L5 [Thermus aquaticus, Genomic, 5... 42 1.6
23gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
24gb|AE016753.1| Mus musculus chromosome 10 high-growth region, se... 42 1.6
25dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.6
26gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Can... 42 1.6
27gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulato... 42 1.6
28ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
29ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
30gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL... 40 6.3
31gb|AC162522.6| Mus musculus chromosome 8, clone RP23-314A15, com... 40 6.3
32gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.3
33gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's ... 40 6.3
34gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, com... 40 6.3
35gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, com... 40 6.3
36gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosom... 40 6.3
37gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.3
38gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.3
39emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon 40 6.3
40gb|AY124963.1| Tomato spotted wilt virus isolate TSWV-FG31 non-s... 40 6.3
41emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.3
42dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.3
43gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.3
44gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, com... 40 6.3
45gb|S77826.1| ribosomal protein L5 [Thermus flavus, Genomic, 549 nt] 40 6.3
46gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 40 6.3
47gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.3
48dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
49gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, compl... 40 6.3
50gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, co... 40 6.3
51gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 6.3
52dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.3
53dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.3
54dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
55dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
56dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
57emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate... 40 6.3
58gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.3
59gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.3
60emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on ch... 40 6.3
61dbj|AB016243.1| Homo sapiens gene for regulatory factor 2 of sod... 40 6.3 
>gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence
          Length = 923

 Score =  293 bits (148), Expect = 3e-76
 Identities = 265/302 (87%), Gaps = 4/302 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ccttcccct-gcccttgctcatgaagtggtggcgcttcaacctcttcttcttgaactg-- 215
           ||||||||| ||||||||||| ||||||| ||||||||||||||||||||  || |    
Sbjct: 730 ccttccccttgcccttgctcaggaagtgggggcgcttcaacctcttcttccggatcacca 671

                                                                       
Query: 216 -gtcagacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcct 274
            ||| | |||||||||||| | ||| ||||||||||||||  | | ||||||   |||||
Sbjct: 670 cgtcggtcttgatgttctccgagaacggcatgccgaggaggaccaccagcctgaacgcct 611

                                                                       
Query: 275 cgttgtcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgccca 334
           ||||||| ||||||||| ||||||||||||  |||||||| ||||||||||| |||||||
Sbjct: 610 cgttgtccgtcttggcgctggtgacgatggacacgtccatgccgttcttcttcccgccca 551

                                                                       
Query: 335 cctcgtaggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgt 394
           ||||||| |||||||||||||||||||||||||| |||||||| | | ||||||||||||
Sbjct: 550 cctcgtacgggatctccgggaacacgccctggtcacggaggccaaggctgtagttgccgt 491

                                                                       
Query: 395 gcccgtcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggt 454
           ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct: 490 gcccgtcgaagctgttggggttgacacccaggaagtccatggtccttgggagcccaaggt 431

             
Query: 455 tg 456
           ||
Sbjct: 430 tg 429
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Plus

                                                                           
Query: 220     gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
               |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 1413671 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 1413730

                                                                           
Query: 280     tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
               |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 1413731 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 1413790

                                                                           
Query: 340     taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
               || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 1413791 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 1413850

                                                                        
Query: 400     tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
               || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 1413851 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 1413907



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                               
Query: 160     cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
               ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413608 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 1413655
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Plus

                                                                         
Query: 220   gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
             |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 75174 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 75233

                                                                         
Query: 280   tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
             |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 75234 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 75293

                                                                         
Query: 340   taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
             || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 75294 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 75353

                                                                      
Query: 400   tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
             || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 75354 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 75410



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                             
Query: 160   cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75111 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 75158
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Plus

                                                                           
Query: 220     gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
               |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 1413669 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 1413728

                                                                           
Query: 280     tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
               |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 1413729 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 1413788

                                                                           
Query: 340     taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
               || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 1413789 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 1413848

                                                                        
Query: 400     tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
               || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 1413849 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 1413905



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                               
Query: 160     cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
               ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413606 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 1413653
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>dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H07, full
           insert sequence
          Length = 1009

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 778 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 719

                                                                       
Query: 280 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 718 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 659

                                                                       
Query: 340 taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
           || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 658 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 599

                                                                    
Query: 400 tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
           || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 598 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 542



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 160 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 794
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>dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N22, full
           insert sequence
          Length = 1011

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 785 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 726

                                                                       
Query: 280 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 725 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 666

                                                                       
Query: 340 taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
           || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 665 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 606

                                                                    
Query: 400 tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
           || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 605 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 549



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 160 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 801
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>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full
           insert sequence
          Length = 2916

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 329 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 388

                                                                       
Query: 280 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 389 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 448

                                                                       
Query: 340 taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
           || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 449 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 508

                                                                    
Query: 400 tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
           || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 509 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 565



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 160 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 313
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>dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F09, full
           insert sequence
          Length = 1044

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 807 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 748

                                                                       
Query: 280 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 747 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 688

                                                                       
Query: 340 taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
           || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 687 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 628

                                                                    
Query: 400 tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
           || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 627 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 571



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 160 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 823
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>dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G09, full
           insert sequence
          Length = 1013

 Score =  224 bits (113), Expect = 2e-55
 Identities = 206/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 782 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 723

                                                                       
Query: 280 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 722 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 663

                                                                       
Query: 340 taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
           || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 662 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 603

                                                                    
Query: 400 tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
           || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 602 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 546



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 160 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 798
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>gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal protein L5 (rpl5) mRNA,
           nuclear gene encoding chloroplast protein, partial cds
          Length = 1025

 Score =  216 bits (109), Expect = 5e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 279
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 774 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 715

                                                                       
Query: 280 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 339
           || ||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 714 tccgtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 655

                                                                       
Query: 340 taggggatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccg 399
           || ||||||||||||||||||||||| || || ||||| |||||| ||||||| || || 
Sbjct: 654 tacgggatctccgggaacacgccctgatcacgaaggcctatggtgaagttgccatggcca 595

                                                                    
Query: 400 tcgaagctgttggggttgacgcctaggaagtccatggtcctagggagcccaaggttg 456
           || ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 594 tcaaagctgttggggttgacaccaaggaagtccatggtcctaggaagcccaaggttg 538



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 160 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 207
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 cttcccctgcccttgctcatgaagtggtggcgcttcaacctcttcttc 790
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 279    gtcggtcttggcggtggtgacgatggtgacgtccat 314
              |||||||||||||||||| |||||||||| ||||||
Sbjct: 318768 gtcggtcttggcggtggtcacgatggtgatgtccat 318733
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 277     ttgtcggtcttggcggtggtgacgatggtga 307
               ||||||||| |||||||||||||||||||||
Sbjct: 1399346 ttgtcggtcgtggcggtggtgacgatggtga 1399316
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 270     cgcctcgttgtcggtcttggcggtggtgacgatggtgacgtccat 314
               |||||| | ||||||||||||||| ||||||||| | ||||||||
Sbjct: 3269086 cgcctcttcgtcggtcttggcggtcgtgacgatgatcacgtccat 3269130
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 373     aggccgatggtgtagttgccgtgcccgtcgaa 404
               ||||||| ||||||||||||||| ||||||||
Sbjct: 2096340 aggccgaaggtgtagttgccgtggccgtcgaa 2096371
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                       
Query: 367     tcgcggaggccgatggtgtagttgccgtgcccgtcgaagctgttggggttgacgcc 422
               ||||| ||||||| ||||||||||||| | |||||||||   |||||| |||||||
Sbjct: 4113721 tcgcgcaggccgagggtgtagttgccgcggccgtcgaaggctttggggctgacgcc 4113776



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     cgtcgaagctgttggggttg 417
               ||||||||||||||||||||
Sbjct: 1995958 cgtcgaagctgttggggttg 1995939
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>gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, complete sequence
          Length = 170293

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 72     aaatatctaaaccaaactatgcaaaag 98
              ||||||||||| |||||||||||||||
Sbjct: 147126 aaatatctaaaacaaactatgcaaaag 147152
to top
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence
          Length = 188083

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 72    aaatatctaaaccaaactatgcaaaag 98
             ||||||||||| |||||||||||||||
Sbjct: 13223 aaatatctaaaacaaactatgcaaaag 13249
to top
>emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 on chromosome 6q22 Contains the
              3' end of the HSF2 gene for  Heat Shock Transcription
              Factor 2 and the 3' end of a novel gene for KIAA1253
              protein (similar to tumor differentially expressed TDE1),
              complete sequence
          Length = 160203

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 34     aacatgaacagcaagtaataag 55
              ||||||||||||||||||||||
Sbjct: 119330 aacatgaacagcaagtaataag 119351
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 277     ttgtcggtcttggcggtggtg 297
               |||||||||||||||||||||
Sbjct: 2637964 ttgtcggtcttggcggtggtg 2637984
to top
>gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, complete sequence
          Length = 173365

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    aacagcaagtaataagagaca 60
             |||||||||||||||||||||
Sbjct: 55835 aacagcaagtaataagagaca 55855
to top
>emb|X56552.1|TASPCOP T.aquaticus spc operon for ribosomal proteins S17, L14, L24, L5, S14,
            S8 & L6
          Length = 2700

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 383  tgtagttgccgtgcccgtcgaagctgttggggttgacgcctaggaagtc 431
            ||||||||||  | ||||| |||||||||||||||| |||  |||||||
Sbjct: 1475 tgtagttgccccggccgtcaaagctgttggggttgaggccgcggaagtc 1427
to top
>gb|S77828.1| ribosomal protein L5 [Thermus aquaticus, Genomic, 549 nt]
          Length = 549

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 383 tgtagttgccgtgcccgtcgaagctgttggggttgacgcctaggaagtc 431
           ||||||||||  | ||||| |||||||||||||||| |||  |||||||
Sbjct: 394 tgtagttgccccggccgtcaaagctgttggggttgaggccgcggaagtc 346
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                           
Query: 345     gatctccgggaacacgccctggtcgcggaggccgatggtgtagttgccgtgcccgtcgaa 404
               |||||||||||| | |  ||| ||||||| |||||  ||||||||||| | |||||||||
Sbjct: 2180434 gatctccgggaagatgatctgctcgcggacgccgagcgtgtagttgcccttcccgtcgaa 2180493

                
Query: 405     g 405
               |
Sbjct: 2180494 g 2180494
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>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the
              complete sequence
          Length = 350029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    caaagtgggaagcaacaaagg 131
              |||||||||||||||||||||
Sbjct: 215842 caaagtgggaagcaacaaagg 215862
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                
Query: 270     cgcctcgttgtcggtcttggcggtggtgacgatggtgacgtccataccg 318
               |||||| | |||||||||||| ||||||  || ||||| ||||||||||
Sbjct: 5930434 cgcctcttcgtcggtcttggccgtggtgcagacggtgatgtccataccg 5930482
to top
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184707

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 111    caaagtgggaagcaacaaagg 131
              |||||||||||||||||||||
Sbjct: 112057 caaagtgggaagcaacaaagg 112037
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>gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulatory protein GlnK (glnK)
           gene, complete cds; and putative ammonia transporter
           (amtB) gene, partial cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 277 ttgtcggtcttggcggtggtg 297
           |||||||||||||||||||||
Sbjct: 841 ttgtcggtcttggcggtggtg 821
to top
>ref|XM_482867.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 276 gttgtcggtcttggcggtggtgacgatg 303
           |||||||| || ||||||||||||||||
Sbjct: 972 gttgtcggactcggcggtggtgacgatg 945
to top
>ref|XM_482863.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 276  gttgtcggtcttggcggtggtgacgatg 303
            |||||||| || ||||||||||||||||
Sbjct: 1092 gttgtcggactcggcggtggtgacgatg 1065
to top
>gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL), complete sequence
          Length = 79586

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  tccttcccctgcccttgctc 177
            ||||||||||||||||||||
Sbjct: 7188 tccttcccctgcccttgctc 7207
to top
>gb|AC162522.6| Mus musculus chromosome 8, clone RP23-314A15, complete sequence
          Length = 187888

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ttgacaaagtgggaagcaac 126
              ||||||||||||||||||||
Sbjct: 180956 ttgacaaagtgggaagcaac 180975
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 279     gtcggtcttggcggtggtgacgatggtgacgtccataccg 318
               |||| ||||||||||||| ||||  |||| ||||||||||
Sbjct: 2077203 gtcgttcttggcggtggtcacgaccgtgatgtccataccg 2077242
to top
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    ttcccctgcccttgctcatg 180
              ||||||||||||||||||||
Sbjct: 235292 ttcccctgcccttgctcatg 235273
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>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence
          Length = 235363

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tcacttccttcccctgccct 172
              ||||||||||||||||||||
Sbjct: 160671 tcacttccttcccctgccct 160690
to top
>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   tccttcccctgcccttgctc 177
             ||||||||||||||||||||
Sbjct: 60672 tccttcccctgcccttgctc 60653
to top
>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tcacttccttcccctgccct 172
              ||||||||||||||||||||
Sbjct: 154940 tcacttccttcccctgccct 154921
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 290     cggtggtgacgatggtgacg 309
               ||||||||||||||||||||
Sbjct: 2351553 cggtggtgacgatggtgacg 2351534
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     cctcgtaggggatctccggg 354
               ||||||||||||||||||||
Sbjct: 1604286 cctcgtaggggatctccggg 1604267
to top
>emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon
          Length = 6858

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 373  aggccgatggtgtagttgccgtgcccgtcgaa 404
            ||||||| ||||||||||||||  ||||||||
Sbjct: 1489 aggccgaaggtgtagttgccgttgccgtcgaa 1458
to top
>gb|AY124963.1| Tomato spotted wilt virus isolate TSWV-FG31 non-structural protein
           (NSm) mRNA, partial cds
          Length = 688

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 cttcaacctcttcttcttgaactg 215
           |||||||||||||||||| |||||
Sbjct: 679 cttcaacctcttcttcttcaactg 656
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    gtggtgacgatggtgacgtc 311
              ||||||||||||||||||||
Sbjct: 100611 gtggtgacgatggtgacgtc 100630
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     tcttgccgcccacctcgtag 342
               ||||||||||||||||||||
Sbjct: 4241540 tcttgccgcccacctcgtag 4241521
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     ttgtcggtcttggcggtggt 296
               ||||||||||||||||||||
Sbjct: 4161579 ttgtcggtcttggcggtggt 4161560
to top
>gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, complete sequence
          Length = 212598

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ttgacaaagtgggaagcaac 126
              ||||||||||||||||||||
Sbjct: 164114 ttgacaaagtgggaagcaac 164095
to top
>gb|S77826.1| ribosomal protein L5 [Thermus flavus, Genomic, 549 nt]
          Length = 549

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 383 tgtagttgccgtgcccgtcgaagctgttggggttga 418
           ||||||||||  | ||||| ||||||||||||||||
Sbjct: 394 tgtagttgccccggccgtcaaagctgttggggttga 359
to top
>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    ttccttcccctgcccttgct 176
              ||||||||||||||||||||
Sbjct: 199384 ttccttcccctgcccttgct 199403
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     cggtggtgacgatggtgacg 309
               ||||||||||||||||||||
Sbjct: 3825539 cggtggtgacgatggtgacg 3825558
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 276      gttgtcggtcttggcggtggtgacgatg 303
                |||||||| || ||||||||||||||||
Sbjct: 23047363 gttgtcggactcggcggtggtgacgatg 23047390



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 276      gttgtcggtcttggcggtggtgacgatg 303
                |||||||| || ||||||||||||||||
Sbjct: 23027079 gttgtcggactcggcggtggtgacgatg 23027052
to top
>gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, complete sequence
          Length = 95291

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   gcttgatcttcacttccttc 163
             ||||||||||||||||||||
Sbjct: 13944 gcttgatcttcacttccttc 13925
to top
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence
          Length = 159741

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    ttccttcccctgcccttgct 176
              ||||||||||||||||||||
Sbjct: 120060 ttccttcccctgcccttgct 120041
to top
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 205    ttcttgaactggtcagacttgatgttct 232
              ||||||| ||||||| ||||||||||||
Sbjct: 979145 ttcttgatctggtcatacttgatgttct 979118
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 383     tgtagttgccgtgcccgtcgaagctgttggggttga 418
               ||||||||||  | ||||| ||||||||||||||||
Sbjct: 1584974 tgtagttgccccggccgtcaaagctgttggggttga 1585009
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 280     tcggtcttggcggtggtgacgatg 303
               ||||| ||||||||||||||||||
Sbjct: 1129386 tcggtgttggcggtggtgacgatg 1129409
to top
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 276    gttgtcggtcttggcggtggtgacgatg 303
              |||||||| || ||||||||||||||||
Sbjct: 107091 gttgtcggactcggcggtggtgacgatg 107118



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 276   gttgtcggtcttggcggtggtgacgatg 303
             |||||||| || ||||||||||||||||
Sbjct: 86807 gttgtcggactcggcggtggtgacgatg 86780
to top
>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full
            insert sequence
          Length = 3147

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 276  gttgtcggtcttggcggtggtgacgatg 303
            |||||||| || ||||||||||||||||
Sbjct: 1092 gttgtcggactcggcggtggtgacgatg 1065
to top
>dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J17, full
           insert sequence
          Length = 2361

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 276 gttgtcggtcttggcggtggtgacgatg 303
           |||||||| || ||||||||||||||||
Sbjct: 349 gttgtcggactcggcggtggtgacgatg 322
to top
>emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons
            1-2 and joined CDS
          Length = 1700

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 276  gttgtcggtcttggcggtggtgacgatg 303
            |||||||| || ||||||||||||||||
Sbjct: 1259 gttgtcggactcggcggtggtgacgatg 1232
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 357     cacgccctggtcgcggaggc 376
               ||||||||||||||||||||
Sbjct: 2825411 cacgccctggtcgcggaggc 2825392
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 383     tgtagttgccgtgcccgtcgaagctgttggggttga 418
               ||||||||||  | ||||| ||||||||||||||||
Sbjct: 1260844 tgtagttgccccggccgtcaaagctgttggggttga 1260879
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>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete
             sequence
          Length = 201752

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tcacttccttcccctgccct 172
             ||||||||||||||||||||
Sbjct: 95908 tcacttccttcccctgccct 95889
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>dbj|AB016243.1| Homo sapiens gene for regulatory factor 2 of sodium/hydrogen
            exchanger isoform A3, complete cds
          Length = 14728

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  tccttcccctgcccttgctc 177
            ||||||||||||||||||||
Sbjct: 5409 tccttcccctgcccttgctc 5428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,572,698
Number of Sequences: 3902068
Number of extensions: 3572698
Number of successful extensions: 72910
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72048
Number of HSP's gapped (non-prelim): 861
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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