>Y1561_METJA (Q58956) Hypothetical protein MJ1561|
          Length = 553

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 13/53 (24%), Positives = 31/53 (58%)
 Frame = -3

Query: 420 VQGKLELSHLTPGVTYEVFFEVKLDDPAYGWSTPVNLRLKFPDGTIQQQKENL 262
           ++GK  +SHL PG +  V+F++ +D+ A      +++++ + +   +  KE +
Sbjct: 76  IKGKATISHLNPGESDTVYFKLHVDENAPSRDYEIDVKVSYDEINKEDGKETI 128

>SPIC_HUMAN (Q8N5J4) Transcription factor Spi-C|
          Length = 248

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 348 DDPAYGWSTPVNLRLKFP-DGTIQQQKENLQEKPRGKWLQVKVGEVKPHKGQNGEVEISM 172
           ++P Y W T +N    F  +G I Q  +N+ E       Q+    +   KG  G  ++ +
Sbjct: 60  EEPVYNWRTVINSAADFYFEGNIHQSLQNITEN------QLVQPTLLQQKGGKGRKKLRL 113

Query: 171 FEY 163
           FEY
Sbjct: 114 FEY 116

>Y1506_METJA (Q58901) Hypothetical protein MJ1506|
          Length = 437

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -3

Query: 420 VQGKLELSHLTPGVTYEVFFEVKLDDPAYGWSTPVNLRLKFPDGTIQQQKE 268
           ++GK  +SHL PG +  V+F++ +D+ A      +++++ + +   +  KE
Sbjct: 117 IKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEVDKEDGKE 167

>ISPD_PSEAE (P57707) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 234

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -2

Query: 601 LAGKTKKYWVDERTRHNCFMLFP--RGLAITWSEDPKYWTWHPLKKEGRNRDGGAAERLL 428
           LAG+T    V ERT  +CF+  P  RGL +  +ED  YW        G +       +  
Sbjct: 33  LAGRT----VIERTL-DCFLEHPMLRGLVVCLAEDDPYW-------PGLDCAASRHVQRA 80

Query: 427 AGGPREAGAVPSHARSHLRGLLR 359
           AGG   AG+V       L GLLR
Sbjct: 81  AGGAERAGSV-------LNGLLR 96

>ZNT1_MOUSE (Q60738) Zinc transporter 1 (ZnT-1) (Solute carrier family 30|
           member 1)
          Length = 503

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 406 GAVPSHARSHLRGLLRGEARRPGLRVVDAGEPPAQVPRRHD 284
           GA   H+  H  G L   AR+ G   V+AG PP + P + +
Sbjct: 143 GAGHGHSHGHGHGHLAKGARKAGRAGVEAGAPPGRAPDQEE 183

>RIMM_MYCTU (P66653) Probable 16S rRNA-processing protein rimM|
          Length = 176

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -3

Query: 420 VQGKLELSHLTPGVTYEVFFEVKLDDPAYGWSTPVNLRLKFP 295
           V G++  SH   GVT EV  E++ DDPA  ++    LR K P
Sbjct: 4   VVGRVVKSH---GVTGEVVVEIRTDDPADRFAPGTRLRAKGP 42

>RIMM_MYCBO (P66654) Probable 16S rRNA-processing protein rimM|
          Length = 176

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -3

Query: 420 VQGKLELSHLTPGVTYEVFFEVKLDDPAYGWSTPVNLRLKFP 295
           V G++  SH   GVT EV  E++ DDPA  ++    LR K P
Sbjct: 4   VVGRVVKSH---GVTGEVVVEIRTDDPADRFAPGTRLRAKGP 42

>IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (IP3K-C)
          Length = 678

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 412 EAGAVPSHARSHLRGLLRGEARRPGLR 332
           EAGA+P+ AR  L  L  G  R+PGL+
Sbjct: 14  EAGALPAEARMGLEALRGGRRRQPGLQ 40

>IP3KC_MOUSE (Q7TS72) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (IP3K-C)
          Length = 678

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 412 EAGAVPSHARSHLRGLLRGEARRPGLR 332
           EAGA+P+ AR  L  L  G  R+PGL+
Sbjct: 14  EAGALPAEARMGLEALRGGRRRQPGLQ 40

>CF010_HUMAN (Q5SRN2) Protein C6orf10|
          Length = 563

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -3

Query: 372 EVFFEVKLDDPAYGWSTPVNLRLKF-----PDGTIQQQKENLQEKPRGKWLQVKVGEVKP 208
           ++  EVK+D  A G       +LK      P G   Q K+++ + PRG+  QVK  E   
Sbjct: 287 KIGMEVKVDSDA-GIPKRQETQLKISEMSIPQGQGAQIKKSVSDVPRGQESQVKKSESGV 345

Query: 207 HKGQNGEV 184
            KGQ  +V
Sbjct: 346 PKGQEAQV 353

>LON_BRECH (P36772) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 779

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
 Frame = -3

Query: 360 EVKLDDP------AYGWSTPVNLRLKFPDGTIQQQKENLQEKPRGKWLQ------VKVGE 217
           EV +++P      + G    V   LK P+GTI+   E LQ     ++LQ      V +  
Sbjct: 56  EVHIEEPDAEQIYSIGTVARVKQMLKLPNGTIRVLVEGLQRAKIEEYLQKEDYFVVSITY 115

Query: 216 VKPHKGQNGEVEISM 172
           +K  K +  EVE  M
Sbjct: 116 LKEEKAEENEVEALM 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,551,925
Number of Sequences: 219361
Number of extensions: 2084371
Number of successful extensions: 6940
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6936
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)