ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11h20 |
|---|---|
| Clone Library Name | barley_pub |
>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 96.7 bits (239), Expect = 6e-20 Identities = 47/117 (40%), Positives = 68/117 (58%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H +LH A V+ VG+ F++H + G A+LYSLHSW GI +L+ QW+ GF F F Sbjct: 87 LHGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLF 146 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A+ ++R P HV G +++L++ATA LG E L F + + PE L N Sbjct: 147 PGASFSLRSRYRPQHVFFGAAIFLLSVATALLGLKEALLFELGTKYSTFEPEGVLAN 203
>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 96.7 bits (239), Expect = 6e-20 Identities = 47/117 (40%), Positives = 68/117 (58%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H +LH A V+ VG+ F++H + G A+LYSLHSW GI +L+ QW+ GF F F Sbjct: 87 LHGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLF 146 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A+ ++R P HV G +++L++ATA LG E L F + + PE L N Sbjct: 147 PGASFSLRSRYRPQHVFFGAAIFLLSVATALLGLKEALLFELGTKYSMFEPEGVLAN 203
>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 95.5 bits (236), Expect = 1e-19 Identities = 47/117 (40%), Positives = 65/117 (55%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H +LH ALV+ VG+ F H + G A+LYSLHSW GI LY +QW+ GF F F Sbjct: 86 LHGLLHIFALVIALVGLVAVFDYHRKEGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLF 145 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A+ ++R P H+ G +++L++ TA LG E L F + PE L N Sbjct: 146 PGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFKLRDKYSAFEPEGVLAN 202
>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 95.5 bits (236), Expect = 1e-19 Identities = 47/117 (40%), Positives = 65/117 (55%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H +LH ALV+ VG+ F H + G A+LYSLHSW GI LY +QW+ GF F F Sbjct: 86 LHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLF 145 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A+ ++R P H+ G +++L++ TA LG E L F + PE L N Sbjct: 146 PGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNLGGKYSAFEPEGVLAN 202
>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)| Length = 250 Score = 94.4 bits (233), Expect = 3e-19 Identities = 45/117 (38%), Positives = 64/117 (54%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H +LH A ++ VG+ F H + G A+LYSLHSW GI LY +QW+ GF F F Sbjct: 85 LHGLLHVFAFIIALVGLVAVFDYHKKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLF 144 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A+ ++R P H+ G +++ ++ TA LG E L F S + PE L N Sbjct: 145 PGASFSLRSRYRPQHIFFGATIFLFSVGTALLGLKEALLFKLGSKYSTFEPEGVLAN 201
>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)| Length = 247 Score = 89.0 bits (219), Expect = 1e-17 Identities = 48/117 (41%), Positives = 65/117 (55%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H VLH +ALV+ VG+ F+ H G ++YSLHSW GI T +LY +QWI GF FF Sbjct: 86 LHGVLHIMALVISLVGVIAVFQYHQANGYPDMYSLHSWCGIVTFTLYILQWIIGFSLFFI 145 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A R P H G +++ ++AT+ LG EK+ SS + E LVN Sbjct: 146 PGVAFTYRSQFKPLHEFFGRALFLSSIATSLLGLTEKMFSEYSS----HPAEGILVN 198
>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 88.6 bits (218), Expect = 2e-17 Identities = 45/117 (38%), Positives = 64/117 (54%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFF 479 +H +LH +A V+ VG+ F H + GIA+LYSLHSW GI L+ QW+ G F F Sbjct: 87 LHGLLHVLAFVIALVGLVAVFDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLGFFLF 146 Query: 478 PKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 308 P A+ ++R P HV G +++L++ TA LG E L F + + E L N Sbjct: 147 PGASFSLRSRYRPQHVFFGAAIFLLSVGTALLGLKEALLFQLGTKYSAFESEGVLAN 203
>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)| Length = 266 Score = 76.3 bits (186), Expect = 8e-14 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 8/105 (7%) Frame = -3 Query: 658 IHLVLHAIALVLGAVGIYCAFKNHN--------ETGIANLYSLHSWLGIGTISLYGIQWI 503 +H++LH+ LV + + F HN I NL SLHSW+G+ + LY Q+I Sbjct: 96 LHVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSWIGLSVVILYFAQYI 155 Query: 502 FGFLTFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEK 368 GF+T+FFP +R+ +P+H + G+ ++I T +G E+ Sbjct: 156 VGFITYFFPGMPIPIRQLVMPFHQMFGVLIFIFVSITVAMGISER 200
>YRN9_CAEEL (Q09609) Hypothetical protein R07B1.9| Length = 770 Score = 33.5 bits (75), Expect = 0.58 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = -3 Query: 649 VLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKA 470 +L+ I +V G +G Y ++NH +LY + +G T Y GF T+ KA Sbjct: 48 LLNFIHVVTGCIGFYSLWRNHGSIVTKSLYLVSFVIGFATAVFY------GFTTYRVVKA 101 Query: 469 APNVRK 452 N+ + Sbjct: 102 GENLNQ 107
>PTTBC_ECOLI (P36672) PTS system trehalose-specific EIIBC component (EIIBC-Tre)| (EII-Tre) [Includes: Trehalose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system trehalose-specific EIIB component); Trehalose permease IIC component Length = 473 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -3 Query: 652 LVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGF 494 + L IA +GI + + HNE I+ ++ +WLG+ ++YGI + F Sbjct: 345 IALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRF 397
>EX7L_ZYMMO (Q9FDL4) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 544 Score = 30.8 bits (68), Expect = 3.7 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = -2 Query: 569 ELVQSAFLAWNRNNFSIWYSVDIWILDLLLPQGCAKCEEGCSSL------ARTSWNLRLH 408 ELV + W +N +W + D +L +G A+ E+ S + A+T L L Sbjct: 453 ELVTARLNIWQKNIDQLWRVAEQAHPDKILAKGYARVEDSHSHVVSNAHDAKTHKRLNLI 512 Query: 407 FSPGNGRTWVSGEAHLPPKLR 345 F +G WV+ E PPK R Sbjct: 513 FH--DGSVWVAPET--PPKSR 529
>MATK_LATCL (Q9TIR8) Maturase K (Intron maturase)| Length = 511 Score = 30.0 bits (66), Expect = 6.4 Identities = 9/24 (37%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +2 Query: 170 FLFMQ-YTSHILVFWDWSVTLWFF 238 FLF++ + ++++FW W +LWF+ Sbjct: 294 FLFVKKWKCYLIIFWQWHFSLWFY 317
>CP4CU_BLAGE (Q964T1) Cytochrome P450 4c21 (EC 1.14.14.1) (CYPIVC21)| Length = 501 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 16/56 (28%) Frame = -3 Query: 571 ANLYSL-HSWLGIGTISLYGIQW---------------IFGFLTFFFPKAAPNVRK 452 A LY L HSWLG G ++ G +W + GF+T F K+ VRK Sbjct: 103 AFLYDLFHSWLGTGLLTSSGAKWHQHRKIITPTFHFSILEGFITIFAEKSEILVRK 158
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3371 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/71 (23%), Positives = 33/71 (46%) Frame = +1 Query: 334 ICRCLSFGGR*ASPETQVLPLPGLKCKRRFQEVRAKEEHPSSHLAQPWGRRRSRIQISTE 513 IC +F G A + + +RRF+ + + S W +R+ R ++ T Sbjct: 2160 ICIQAAFRGMRARRRLKAMHSAAAVIQRRFRTLGMRRRFLSLRKTAVWVQRKYRAKVCTR 2219 Query: 514 YHIEKLFLFQA 546 +H+++L L +A Sbjct: 2220 HHVQQLRLQKA 2230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,309,820 Number of Sequences: 219361 Number of extensions: 2032962 Number of successful extensions: 5370 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5367 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
