>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score =  153 bits (77), Expect = 4e-34
 Identities = 167/197 (84%)
 Strand = Plus / Minus

                                                                        
Query: 120  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 179
            ||||| ||||| || || || |||||| | ||||| |||||||| || ||||||||||| 
Sbjct: 1484 ggcggagtctgcggcttaggagctggcttcggtttcgtcatgatcggcttgcagaaccta 1425

                                                                        
Query: 180  tcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagcatgcttc 239
            ||||||| |||||| |||||||| | ||||| | ||||||| || | |||||||||||| 
Sbjct: 1424 tcaagtgtttcagctttcttcttaaggtcagcagcaaggagtaccgaattagcatgcttt 1365

                                                                        
Query: 240  ggtagagcatcttgctgctgctttttctccattagccaggtctctgcatccgagcactca 299
            || |||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 1364 ggcagagcatcctgctgctgctttttctctattagccaagtctctgcttccgaacactca 1305

                             
Query: 300  ttaacaaccttttgctt 316
            ||||  |||||| ||||
Sbjct: 1304 ttaatgacctttcgctt 1288

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  133 bits (67), Expect = 4e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                           
Query: 174     aacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagca 233
               |||||||||||||||||||| |||||||| |||||||| |  | ||||||||||| ||||
Sbjct: 4825148 aacctgtcaagtgcttcagctttcttcttcatgtcagatattaagaggacaggatcagca 4825089

                                                                           
Query: 234     tgcttcggtagagcatcttgctgctgctttttctccattagccaggtctctgcatccgag 293
               ||||| ||||||||||| |||||||||| |||||| ||||||||| |||| || ||||| 
Sbjct: 4825088 tgctttggtagagcatcctgctgctgctgtttctctattagccagatctcggcctccgaa 4825029

                      
Query: 294     cactcat 300
               |||||||
Sbjct: 4825028 cactcat 4825022

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score =  133 bits (67), Expect = 4e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                         
Query: 174   aacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagca 233
             |||||||||||||||||||| |||||||| |||||||| |  | ||||||||||| ||||
Sbjct: 97556 aacctgtcaagtgcttcagctttcttcttcatgtcagatattaagaggacaggatcagca 97497

                                                                         
Query: 234   tgcttcggtagagcatcttgctgctgctttttctccattagccaggtctctgcatccgag 293
             ||||| ||||||||||| |||||||||| |||||| ||||||||| |||| || ||||| 
Sbjct: 97496 tgctttggtagagcatcctgctgctgctgtttctctattagccagatctcggcctccgaa 97437

                    
Query: 294   cactcat 300
             |||||||
Sbjct: 97436 cactcat 97430

>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score =  131 bits (66), Expect = 1e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 175  acctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggacaggattagcat 234
            ||||||||||||||||||| |||||||| |||||||| |  | ||||||||||| |||||
Sbjct: 2503 acctgtcaagtgcttcagctttcttcttcatgtcagatattaagaggacaggatcagcat 2444

                                                                        
Query: 235  gcttcggtagagcatcttgctgctgctttttctccattagccaggtctctgcatccgagc 294
            |||| ||||||||||| |||||||||| |||||| ||||||||| |||| || ||||| |
Sbjct: 2443 gctttggtagagcatcctgctgctgctgtttctctattagccagatctcggcctccgaac 2384

                  
Query: 295  actcat 300
            ||||||
Sbjct: 2383 actcat 2378

>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score =  101 bits (51), Expect = 1e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                        
Query: 120  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 179
            ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 1642 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 1583

                                   
Query: 180  tcaagtgcttcagccttcttctt 202
            |||||||||||||| ||||||||
Sbjct: 1582 tcaagtgcttcagctttcttctt 1560

>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score =  101 bits (51), Expect = 1e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                       
Query: 120 ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 179
           ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 820 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 761

                                  
Query: 180 tcaagtgcttcagccttcttctt 202
           |||||||||||||| ||||||||
Sbjct: 760 tcaagtgcttcagctttcttctt 738

>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 165  ggtttgcagaacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggaca 224
            |||||||||||||||||||  | ||| ||||| |||||||  ||||||   || ||||||
Sbjct: 2547 ggtttgcagaacctgtcaaccgtttcggcctttttctttaaatcagaagagagtaggaca 2488

                                                        
Query: 225  ggattagcatgcttcggtagagcatcttgctgctgctttttctc 268
            || |||||||||||||| |||||||||||||||||  |||||||
Sbjct: 2487 gggttagcatgcttcggcagagcatcttgctgctgtattttctc 2444

>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
            insert sequence
          Length = 3139

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 165  ggtttgcagaacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggaca 224
            |||||||||||||||||||  | ||| ||||| |||||||  ||||||   || ||||||
Sbjct: 2547 ggtttgcagaacctgtcaaccgtttcggcctttttctttaaatcagaagagagtaggaca 2488

                                                        
Query: 225  ggattagcatgcttcggtagagcatcttgctgctgctttttctc 268
            || |||||||||||||| |||||||||||||||||  |||||||
Sbjct: 2487 gggttagcatgcttcggcagagcatcttgctgctgtattttctc 2444

>dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C02, full
           insert sequence
          Length = 1144

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                       
Query: 165 ggtttgcagaacctgtcaagtgcttcagccttcttctttatgtcagaaacaaggaggaca 224
           |||||||||||||||||||  | ||| ||||| |||||||  ||||||   || ||||||
Sbjct: 617 ggtttgcagaacctgtcaaccgtttcggcctttttctttaaatcagaagagagtaggaca 558

                                                       
Query: 225 ggattagcatgcttcggtagagcatcttgctgctgctttttctc 268
           || |||||||||||||| |||||||||||||||||  |||||||
Sbjct: 557 gggttagcatgcttcggcagagcatcttgctgctgtattttctc 514

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                 
Query: 219     aggacaggattagcatgcttcggtagagcatcttgctgctgctttttctc 268
               |||||||| |||||||||||||| |||||||||||||||||  |||||||
Sbjct: 4257850 aggacagggttagcatgcttcggcagagcatcttgctgctgtattttctc 4257801

>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 219   aggacaggattagcatgcttcggtagagcatcttgctgctgctttttctc 268
             |||||||| |||||||||||||| |||||||||||||||||  |||||||
Sbjct: 95817 aggacagggttagcatgcttcggcagagcatcttgctgctgtattttctc 95768

>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 219   aggacaggattagcatgcttcggtagagcatcttgctgctgctttttctc 268
             |||||||| |||||||||||||| |||||||||||||||||  |||||||
Sbjct: 37620 aggacagggttagcatgcttcggcagagcatcttgctgctgtattttctc 37571

>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    cagccttcttctttatgtcag 210
              |||||||||||||||||||||
Sbjct: 530338 cagccttcttctttatgtcag 530318

>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence
          Length = 220032

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 265    tctccattagccaggtctctg 285
              |||||||||||||||||||||
Sbjct: 117076 tctccattagccaggtctctg 117096

>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence
          Length = 149173

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   ttcttctttatgtcagaaaca 215
             |||||||||||||||||||||
Sbjct: 89809 ttcttctttatgtcagaaaca 89829

>gb|AE009707.1| Brucella melitensis 16M chromosome II, section 69 of 107 of the
            complete sequence
          Length = 9807

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 190  cagccttcttctttatgtcag 210
            |||||||||||||||||||||
Sbjct: 1371 cagccttcttctttatgtcag 1391

>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    cagccttcttctttatgtcag 210
              |||||||||||||||||||||
Sbjct: 683960 cagccttcttctttatgtcag 683980

>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    cagccttcttctttatgtcag 210
              |||||||||||||||||||||
Sbjct: 683948 cagccttcttctttatgtcag 683968

>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence
          Length = 227440

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tgctcacccacatgctcatc 25
              ||||||||||||||||||||
Sbjct: 100132 tgctcacccacatgctcatc 100113

>gb|AC148114.8| Mus musculus chromosome 8, clone RP24-134B6, complete sequence
          Length = 155465

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   ctgctgctttttctccatta 273
             ||||||||||||||||||||
Sbjct: 15201 ctgctgctttttctccatta 15220

>emb|AL391316.7| Human DNA sequence from clone XX-YM901F10 on chromosome 20 Contains
             ESTs, GSSs and STSs, complete sequence
          Length = 49377

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   ctgctgctttttctccatta 273
             ||||||||||||||||||||
Sbjct: 44986 ctgctgctttttctccatta 45005

>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence
          Length = 152130

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 190  cagccttcttctttatgtcagaaacaag 217
            |||||||||||||| ||||||| |||||
Sbjct: 2580 cagccttcttctttgtgtcagatacaag 2553

>gb|AC026118.17| Homo sapiens 3 BAC RP11-67F24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176108

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    atcttgctgctgctttttct 267
              ||||||||||||||||||||
Sbjct: 117420 atcttgctgctgctttttct 117439

>gb|AC107908.3| Homo sapiens chromosome 15, clone CTD1-2291N1, complete sequence
          Length = 132718

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 190    cagccttcttctttatgtcagaaacaag 217
              |||||||||||||| ||||||| |||||
Sbjct: 112366 cagccttcttctttgtgtcagatacaag 112339

>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence
          Length = 184520

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   tttctccattagccaggtct 282
             ||||||||||||||||||||
Sbjct: 96352 tttctccattagccaggtct 96333

>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   tgctgctttttctccattag 274
             ||||||||||||||||||||
Sbjct: 56055 tgctgctttttctccattag 56074

>dbj|AK016006.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930540C21 product:hypothetical protein,
           full insert sequence
          Length = 1307

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctgctgctttttctccatta 273
           ||||||||||||||||||||
Sbjct: 728 ctgctgctttttctccatta 709

>dbj|AK015811.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930517G15 product:hypothetical protein,
           full insert sequence
          Length = 1504

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctgctgctttttctccatta 273
           ||||||||||||||||||||
Sbjct: 710 ctgctgctttttctccatta 691

>ref|NM_031749.1| Rattus norvegicus glucosidase 1 (Gcs1), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 gtggttttggcgctggcctt 149
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165

>gb|AF087431.1|AF087431 Rattus norvegicus glycoprotein processing glucosidase I mRNA,
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 gtggttttggcgctggcctt 149
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165

>gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, complete sequence
          Length = 211847

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  tgctgctttttctccattag 274
            ||||||||||||||||||||
Sbjct: 3990 tgctgctttttctccattag 3971

>ref|NM_029061.1| Mus musculus coiled-coil domain containing 7 (Ccdc7), mRNA
          Length = 1504

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctgctgctttttctccatta 273
           ||||||||||||||||||||
Sbjct: 710 ctgctgctttttctccatta 691

>gb|AY854152.1| Mus musculus testis-specific antigen mRNA, complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctgctgctttttctccatta 273
           ||||||||||||||||||||
Sbjct: 760 ctgctgctttttctccatta 741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,245,875
Number of Sequences: 3902068
Number of extensions: 3245875
Number of successful extensions: 54494
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54413
Number of HSP's gapped (non-prelim): 81
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)