>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  253 bits (645), Expect(3) = 1e-88
 Identities = 125/125 (100%), Positives = 125/125 (100%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR
Sbjct: 303 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 362

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT
Sbjct: 363 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 422

Query: 242 GSFYG 228
           GSFYG
Sbjct: 423 GSFYG 427



 Score = 86.3 bits (212), Expect(3) = 1e-88
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 180 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 67
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



 Score = 29.3 bits (64), Expect(3) = 1e-88
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTRDDR    +G
Sbjct: 293 FYWAPTRDDRIGVCKG 308

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  206 bits (524), Expect(3) = 2e-68
 Identities = 96/125 (76%), Positives = 113/125 (90%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+
Sbjct: 313 IGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKK 372

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K 
Sbjct: 373 LVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKR 432

Query: 242 GSFYG 228
           G+FYG
Sbjct: 433 GTFYG 437



 Score = 66.6 bits (161), Expect(3) = 2e-68
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 183 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 67
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



 Score = 27.7 bits (60), Expect(3) = 2e-68
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 303 FYWAPTREDRIGVCKG 318

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  199 bits (505), Expect(3) = 1e-66
 Identities = 95/125 (76%), Positives = 110/125 (88%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKR
Sbjct: 313 IGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKR 372

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  
Sbjct: 373 LVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGR 432

Query: 242 GSFYG 228
           G+FYG
Sbjct: 433 GTFYG 437



 Score = 67.8 bits (164), Expect(3) = 1e-66
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 180 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 67
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474



 Score = 27.7 bits (60), Expect(3) = 1e-66
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 303 FYWAPTREDRIGVCKG 318

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  198 bits (503), Expect(3) = 5e-65
 Identities = 93/125 (74%), Positives = 110/125 (88%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+
Sbjct: 311 IGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKK 370

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  
Sbjct: 371 LVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDR 430

Query: 242 GSFYG 228
           G+F+G
Sbjct: 431 GTFFG 435



 Score = 63.9 bits (154), Expect(3) = 5e-65
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 180 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 73
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470



 Score = 26.9 bits (58), Expect(3) = 5e-65
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 633 FYWAPTRDDR 604
           FYWAPTR+DR
Sbjct: 301 FYWAPTREDR 310

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  220 bits (561), Expect(2) = 1e-59
 Identities = 103/125 (82%), Positives = 117/125 (93%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKR
Sbjct: 303 VGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKR 362

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKT
Sbjct: 363 LVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKT 422

Query: 242 GSFYG 228
           GSFYG
Sbjct: 423 GSFYG 427



 Score = 29.3 bits (64), Expect(2) = 1e-59
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTRDDR    +G
Sbjct: 293 FYWAPTRDDRVGVCKG 308

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  222 bits (565), Expect(2) = 1e-59
 Identities = 104/125 (83%), Positives = 117/125 (93%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KR
Sbjct: 300 IGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKR 359

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKT
Sbjct: 360 LVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKT 419

Query: 242 GSFYG 228
           G+FYG
Sbjct: 420 GAFYG 424



 Score = 27.7 bits (60), Expect(2) = 1e-59
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 290 FYWAPTREDRIGVCKG 305

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  209 bits (532), Expect(2) = 2e-55
 Identities = 97/125 (77%), Positives = 115/125 (92%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+
Sbjct: 313 IGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKK 372

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM T
Sbjct: 373 LVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNT 432

Query: 242 GSFYG 228
           G+FYG
Sbjct: 433 GTFYG 437



 Score = 26.9 bits (58), Expect(2) = 2e-55
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 633 FYWAPTRDDR 604
           FYWAPTR+DR
Sbjct: 303 FYWAPTREDR 312

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  208 bits (530), Expect(2) = 2e-55
 Identities = 96/124 (77%), Positives = 115/124 (92%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++
Sbjct: 309 IGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARK 368

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKT
Sbjct: 369 LVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKT 428

Query: 242 GSFY 231
           GSF+
Sbjct: 429 GSFF 432



 Score = 27.7 bits (60), Expect(2) = 2e-55
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 299 FYWAPTREDRIGVCKG 314

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  207 bits (528), Expect(2) = 3e-55
 Identities = 100/123 (81%), Positives = 113/123 (91%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +
Sbjct: 317 IGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDK 376

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ T
Sbjct: 377 LLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINT 436

Query: 242 GSF 234
           G+F
Sbjct: 437 GNF 439



 Score = 27.7 bits (60), Expect(2) = 3e-55
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 307 FYWAPTREDRIGVCKG 322

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  206 bits (524), Expect(2) = 8e-55
 Identities = 99/121 (81%), Positives = 113/121 (93%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++
Sbjct: 312 IGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEK 371

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ T
Sbjct: 372 LLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINT 431

Query: 242 G 240
           G
Sbjct: 432 G 432



 Score = 27.7 bits (60), Expect(2) = 8e-55
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 302 FYWAPTREDRIGVCKG 317

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  206 bits (523), Expect(2) = 1e-54
 Identities = 95/123 (77%), Positives = 113/123 (91%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+
Sbjct: 313 IGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKK 372

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K 
Sbjct: 373 LVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKR 432

Query: 242 GSF 234
           G+F
Sbjct: 433 GTF 435



 Score = 27.7 bits (60), Expect(2) = 1e-54
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 303 FYWAPTREDRIGVCKG 318

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  202 bits (513), Expect(2) = 2e-53
 Identities = 98/124 (79%), Positives = 108/124 (87%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +
Sbjct: 317 IGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDK 376

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  
Sbjct: 377 LLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINN 436

Query: 242 GSFY 231
           GSF+
Sbjct: 437 GSFF 440



 Score = 26.9 bits (58), Expect(2) = 2e-53
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 633 FYWAPTRDDR 604
           FYWAPTR+DR
Sbjct: 307 FYWAPTREDR 316

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  196 bits (497), Expect(2) = 3e-52
 Identities = 87/124 (70%), Positives = 113/124 (91%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+
Sbjct: 315 VGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKK 374

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+
Sbjct: 375 LVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKS 434

Query: 242 GSFY 231
           GSF+
Sbjct: 435 GSFF 438



 Score = 29.3 bits (64), Expect(2) = 3e-52
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTRDDR    +G
Sbjct: 305 FYWAPTRDDRVGVCKG 320

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  189 bits (479), Expect(2) = 1e-49
 Identities = 85/124 (68%), Positives = 111/124 (89%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+
Sbjct: 317 IGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKK 376

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 243
           LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+
Sbjct: 377 LVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKS 436

Query: 242 GSFY 231
           GSF+
Sbjct: 437 GSFF 440



 Score = 27.7 bits (60), Expect(2) = 1e-49
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYWAPTR+DR    +G
Sbjct: 307 FYWAPTREDRIGVCKG 322

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  157 bits (398), Expect(2) = 4e-40
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ 
Sbjct: 310 IGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRN 369

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 303
           LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 370 LVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409



 Score = 26.9 bits (58), Expect(2) = 4e-40
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 633 FYWAPTRDDR 604
           FYWAPTR+DR
Sbjct: 300 FYWAPTREDR 309

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  133 bits (335), Expect(2) = 6e-32
 Identities = 67/110 (60%), Positives = 81/110 (73%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           IGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++
Sbjct: 286 IGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQ 345

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 273
           LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 346 LVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394



 Score = 23.9 bits (50), Expect(2) = 6e-32
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           +YW PTR+DR     G
Sbjct: 276 YYWNPTREDRIGVCMG 291

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  104 bits (259), Expect(2) = 1e-22
 Identities = 46/104 (44%), Positives = 69/104 (66%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           +G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+  R
Sbjct: 186 VGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLR 245

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 291
           +VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 246 VVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289



 Score = 21.6 bits (44), Expect(2) = 1e-22
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYW P RD++   + G
Sbjct: 176 FYWEPHRDEKVGIVGG 191

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 96.7 bits (239), Expect(2) = 6e-21
 Identities = 44/104 (42%), Positives = 67/104 (64%)
 Frame = -1

Query: 602 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 423
           +G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I  R
Sbjct: 186 VGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLR 245

Query: 422 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 291
           +VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 246 VVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289



 Score = 23.9 bits (50), Expect(2) = 6e-21
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 633 FYWAPTRDDRYRCLQG 586
           FYW P RDD+   + G
Sbjct: 176 FYWEPNRDDKVGIVGG 191

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -1

Query: 542 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 363
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>ARGC_METJA (Q58496) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 341

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -1

Query: 623 LPPVTTGIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRK--WVGS 450
           L P+T GI      F   +V  E ++KI + F G  +        R++ +E+ K  WV  
Sbjct: 231 LAPITRGILTTAHTFLAKDVDREEIIKIYEKFYGSEV------FVRIFSEEIPKLTWVRG 284

Query: 449 TGIENIG 429
           T   +IG
Sbjct: 285 TNFCDIG 291

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -1

Query: 398 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 243
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 242 GSFYG*KILHTHPPSLAA 189
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -1

Query: 545 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 366
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 365 KLLEYGHMLVQEQDNVKRV 309
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 459 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 584
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>FTHS_VIBVU (Q8D7D8) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 582

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 27/148 (18%)
 Frame = -1

Query: 635 SSTGLPPVTTGIGVCKGIFQTDNVSDES------------------VVKIVDTFPGQSID 510
           +++GL  +  G+ +   +FQ D  + ES                  VV  ++ FP  S +
Sbjct: 353 ANSGLYDLKPGMPLPDALFQPDRAALESGFSNLKWHIDNAQKYGLPVVVAINQFPQDSAE 412

Query: 509 FFGALRARVYDDEVRKWV--------GSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLE 354
             G L+  +    +   V        G  G+E + + ++ + D P  F +P    E+ LE
Sbjct: 413 ELGQLKLWIQQLPLNVRVAISEGFAKGGKGMEAVAREVIEACDAPANF-RPLYRAEQTLE 471

Query: 353 YGHMLVQEQD-NVKRVQLADTYMSQAAL 273
              + V  +      VQ +DT   Q AL
Sbjct: 472 EKIITVCTKGYGCGEVQFSDTAKQQLAL 499

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 295 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 399
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -1

Query: 398 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 243
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 242 GSFYG*KILHTHPPSLAA 189
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -1

Query: 461 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 354
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,041,237
Number of Sequences: 219361
Number of extensions: 1816893
Number of successful extensions: 5643
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5640
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)